Miyakogusa Predicted Gene

Lj4g3v2603590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2603590.1 CUFF.51203.1
         (447 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g085190.1 | hypothetical protein | HC | chr8:35245686-3524...   337   1e-92
Medtr5g079680.2 | hypothetical protein | HC | chr5:34077594-3407...   149   5e-36
Medtr5g079680.1 | hypothetical protein | HC | chr5:34077575-3407...   149   5e-36

>Medtr8g085190.1 | hypothetical protein | HC |
           chr8:35245686-35247707 | 20130731
          Length = 442

 Score =  337 bits (865), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 181/275 (65%), Positives = 195/275 (70%), Gaps = 16/275 (5%)

Query: 1   MIPPRRKKWTEAEEKTLIDKYGEMVADGSLAKMRTREKKFKPIACHVNSLHHLRDPMAYP 60
           MIPPRRKKWTEAEEKTLIDKYGEMV DGSLAKMRTREKKFKPIAC+VNS+HH+RDP+ YP
Sbjct: 1   MIPPRRKKWTEAEEKTLIDKYGEMVTDGSLAKMRTREKKFKPIACYVNSVHHVRDPVVYP 60

Query: 61  WQWSWKDVSTKVQNMRHQYLLVKQKIKKPEFSGMESSNGGDCDG-GEFDWVEGLTHWSNF 119
           WQWSWKDVSTKVQNMRHQYLLVKQKIKK EFS      GG+CDG  EFDWVEGLTHWSNF
Sbjct: 61  WQWSWKDVSTKVQNMRHQYLLVKQKIKKGEFS------GGECDGSSEFDWVEGLTHWSNF 114

Query: 120 LRYKEVFGDVALVVGSYA-NGGGNELMVIXXXXXXXXXXXXXXXXXXXXXXXXMVEFGQM 178
           LRYKEVFGDVALVVG  A +GG NEL+                          M EFG M
Sbjct: 115 LRYKEVFGDVALVVGGGAEHGGNNELLGF----ADGDRGDRDGFLGSGGGGMDMAEFGHM 170

Query: 179 GHSXXXXXXXXXXXXXXXVDNEVMGLGFEYDAEEGEVNYNENGRTREDAENG--YEEGEV 236
           GHS               VDNEV+GLGFEY+AEEGEVN+N NG  REDAENG  YEEGEV
Sbjct: 171 GHS--GDGDGDFAVAMDGVDNEVIGLGFEYEAEEGEVNFNGNGGMREDAENGYVYEEGEV 228

Query: 237 TGLNSXXXXXXXXXXXXXVWRILSNQMGQLREMEA 271
           TG N              +WR+ +NQ+GQLREME 
Sbjct: 229 TGSNLKKKRKVVKGMEKKMWRVFANQLGQLREMEV 263



 Score =  183 bits (465), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 86/92 (93%), Positives = 90/92 (97%)

Query: 356 WKKRIDEMLNQHRAEMGQIQTRILHEQQNLTSQLLGIFSQWTAQPAGISDHTSASNHYLS 415
           WKKRID+MLNQHRAEMGQ+QTRILHEQQNL+SQLLGIFSQWTAQPA +SDHTSASNHYLS
Sbjct: 351 WKKRIDDMLNQHRAEMGQVQTRILHEQQNLSSQLLGIFSQWTAQPAALSDHTSASNHYLS 410

Query: 416 QMMQNLHHVNGIVHGDTRVEGDNQEDQFIVDG 447
           QMMQNLHHVNGIVH DTRVEGDNQEDQFIVDG
Sbjct: 411 QMMQNLHHVNGIVHEDTRVEGDNQEDQFIVDG 442


>Medtr5g079680.2 | hypothetical protein | HC |
           chr5:34077594-34074842 | 20130731
          Length = 328

 Score =  149 bits (376), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 72/136 (52%), Positives = 94/136 (69%), Gaps = 14/136 (10%)

Query: 5   RRKKWTEAEEKTLIDKYGEMVADGSLAKMRTREKKFKPIACHVNSLHHLRDPMAYPWQWS 64
           +RKKW+E EE+TL+ KY E+   G+L K++TREKKFKPIA HVN++HHL DP  +P++WS
Sbjct: 2   KRKKWSELEEQTLLTKYSELHRSGTLPKLKTREKKFKPIADHVNAVHHLHDPTTFPFKWS 61

Query: 65  WKDVSTKVQNMRHQYLLVKQKIKKPEFSGMESSNGGDCDGGEFDWVEGLTHWSNFLRYKE 124
           W+DVS KVQNMRHQY+ VK KI        +S++ G      F+W +G+ HW NFL YK 
Sbjct: 62  WRDVSIKVQNMRHQYIGVKHKI--------QSNDHG------FNWNDGVIHWENFLNYKR 107

Query: 125 VFGDVALVVGSYANGG 140
           VFGDV +      N G
Sbjct: 108 VFGDVKIHPKPKLNDG 123


>Medtr5g079680.1 | hypothetical protein | HC |
           chr5:34077575-34073115 | 20130731
          Length = 328

 Score =  149 bits (376), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 72/136 (52%), Positives = 94/136 (69%), Gaps = 14/136 (10%)

Query: 5   RRKKWTEAEEKTLIDKYGEMVADGSLAKMRTREKKFKPIACHVNSLHHLRDPMAYPWQWS 64
           +RKKW+E EE+TL+ KY E+   G+L K++TREKKFKPIA HVN++HHL DP  +P++WS
Sbjct: 2   KRKKWSELEEQTLLTKYSELHRSGTLPKLKTREKKFKPIADHVNAVHHLHDPTTFPFKWS 61

Query: 65  WKDVSTKVQNMRHQYLLVKQKIKKPEFSGMESSNGGDCDGGEFDWVEGLTHWSNFLRYKE 124
           W+DVS KVQNMRHQY+ VK KI        +S++ G      F+W +G+ HW NFL YK 
Sbjct: 62  WRDVSIKVQNMRHQYIGVKHKI--------QSNDHG------FNWNDGVIHWENFLNYKR 107

Query: 125 VFGDVALVVGSYANGG 140
           VFGDV +      N G
Sbjct: 108 VFGDVKIHPKPKLNDG 123