Miyakogusa Predicted Gene
- Lj4g3v2593480.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2593480.1 Non Characterized Hit- tr|F6I752|F6I752_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,44.03,1e-17,seg,NULL; coiled-coil,NULL,CUFF.51232.1
(478 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g084030.1 | rhodanese/cell cycle control phosphatase super... 211 1e-54
Medtr3g084030.3 | rhodanese/cell cycle control phosphatase super... 211 1e-54
Medtr3g084030.4 | rhodanese/cell cycle control phosphatase super... 211 1e-54
Medtr3g084030.5 | rhodanese/cell cycle control phosphatase super... 211 1e-54
Medtr8g081570.1 | hypothetical protein | LC | chr8:35185084-3519... 186 4e-47
Medtr8g081570.2 | hypothetical protein | LC | chr8:35183759-3519... 186 5e-47
Medtr3g084030.2 | rhodanese/cell cycle control phosphatase super... 77 4e-14
>Medtr3g084030.1 | rhodanese/cell cycle control phosphatase
superfamily protein | LC | chr3:37957230-37933056 |
20130731
Length = 1378
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 150/226 (66%), Gaps = 28/226 (12%)
Query: 86 ISTADDKGFSGQGGDHNVSSI-PKEIKQSGNKGILFENKLVKQYPGNNGESARENNHVAE 144
IS AD +G Q N ++ KEIKQ+ K LFE++L KQ+ NNGE ARENNH+AE
Sbjct: 117 ISAADGRGSPAQAQGLNAGNLHQKEIKQNDKKAFLFEDRLTKQHGSNNGEKARENNHLAE 176
Query: 145 ANKDSKFLLELDRRLKVNDGGAGNQLVQKVTTDTAHTKDEGTVRLVAK--GSGPWSDGKE 202
NKDSKFL+ELDRR++ NDGGAG QLVQ+ TT KDEGTVRLVAK G+G W DGKE
Sbjct: 177 ENKDSKFLMELDRRVRNNDGGAGTQLVQQSTTADCR-KDEGTVRLVAKISGTGTWPDGKE 235
Query: 203 KLKDKSLDAKKIDGKGIQIEVRSIGNATDQNH------VGS------------LDAKKID 244
KL++K +DAKKIDG+GI+ E R IGNAT QNH +G+ +DAKKID
Sbjct: 236 KLQNKGVDAKKIDGRGIRAEARPIGNATVQNHAVDGKKIGTWPNGKEKFQDKGVDAKKID 295
Query: 245 GKGIQGEVRSIGNAAGQNHVGNFDPRIDRLPKLVAKHFDRNLEATI 290
G+GI E R IGNAA QNH GN PR + K+FD+ LE +
Sbjct: 296 GRGICTEARPIGNAAVQNHAGNCHPRP------LEKNFDKTLEGRV 335
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 414 NAVSGVNHKKRKNIESNGVPRVNDSCPNKMLKPSSSSHPFTENGRILEPCQISIPNASYG 473
N++ G N KKRK I+SNGV +DS P+ ML SSSHPFTENGRILEPCQIS NAS G
Sbjct: 570 NSIIGDNLKKRKEIDSNGVLHAHDSRPS-MLPGPSSSHPFTENGRILEPCQISPINASDG 628
Query: 474 PGVA 477
P A
Sbjct: 629 PAAA 632
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MSRCFPFPPPGYEKKTRTDEVDLL 24
MSRCFPFPPPGYEKK+RTD+VDLL
Sbjct: 29 MSRCFPFPPPGYEKKSRTDDVDLL 52
>Medtr3g084030.3 | rhodanese/cell cycle control phosphatase
superfamily protein | LC | chr3:37958414-37933056 |
20130731
Length = 1350
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 150/226 (66%), Gaps = 28/226 (12%)
Query: 86 ISTADDKGFSGQGGDHNVSSI-PKEIKQSGNKGILFENKLVKQYPGNNGESARENNHVAE 144
IS AD +G Q N ++ KEIKQ+ K LFE++L KQ+ NNGE ARENNH+AE
Sbjct: 89 ISAADGRGSPAQAQGLNAGNLHQKEIKQNDKKAFLFEDRLTKQHGSNNGEKARENNHLAE 148
Query: 145 ANKDSKFLLELDRRLKVNDGGAGNQLVQKVTTDTAHTKDEGTVRLVAK--GSGPWSDGKE 202
NKDSKFL+ELDRR++ NDGGAG QLVQ+ TT KDEGTVRLVAK G+G W DGKE
Sbjct: 149 ENKDSKFLMELDRRVRNNDGGAGTQLVQQSTTADCR-KDEGTVRLVAKISGTGTWPDGKE 207
Query: 203 KLKDKSLDAKKIDGKGIQIEVRSIGNATDQNH------VGS------------LDAKKID 244
KL++K +DAKKIDG+GI+ E R IGNAT QNH +G+ +DAKKID
Sbjct: 208 KLQNKGVDAKKIDGRGIRAEARPIGNATVQNHAVDGKKIGTWPNGKEKFQDKGVDAKKID 267
Query: 245 GKGIQGEVRSIGNAAGQNHVGNFDPRIDRLPKLVAKHFDRNLEATI 290
G+GI E R IGNAA QNH GN PR + K+FD+ LE +
Sbjct: 268 GRGICTEARPIGNAAVQNHAGNCHPRP------LEKNFDKTLEGRV 307
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 414 NAVSGVNHKKRKNIESNGVPRVNDSCPNKMLKPSSSSHPFTENGRILEPCQISIPNASYG 473
N++ G N KKRK I+SNGV +DS P+ ML SSSHPFTENGRILEPCQIS NAS G
Sbjct: 542 NSIIGDNLKKRKEIDSNGVLHAHDSRPS-MLPGPSSSHPFTENGRILEPCQISPINASDG 600
Query: 474 PGVA 477
P A
Sbjct: 601 PAAA 604
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MSRCFPFPPPGYEKKTRTDEVDLL 24
MSRCFPFPPPGYEKK+RTD+VDLL
Sbjct: 1 MSRCFPFPPPGYEKKSRTDDVDLL 24
>Medtr3g084030.4 | rhodanese/cell cycle control phosphatase
superfamily protein | LC | chr3:37958546-37933003 |
20130731
Length = 1350
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 150/226 (66%), Gaps = 28/226 (12%)
Query: 86 ISTADDKGFSGQGGDHNVSSI-PKEIKQSGNKGILFENKLVKQYPGNNGESARENNHVAE 144
IS AD +G Q N ++ KEIKQ+ K LFE++L KQ+ NNGE ARENNH+AE
Sbjct: 89 ISAADGRGSPAQAQGLNAGNLHQKEIKQNDKKAFLFEDRLTKQHGSNNGEKARENNHLAE 148
Query: 145 ANKDSKFLLELDRRLKVNDGGAGNQLVQKVTTDTAHTKDEGTVRLVAK--GSGPWSDGKE 202
NKDSKFL+ELDRR++ NDGGAG QLVQ+ TT KDEGTVRLVAK G+G W DGKE
Sbjct: 149 ENKDSKFLMELDRRVRNNDGGAGTQLVQQSTTADCR-KDEGTVRLVAKISGTGTWPDGKE 207
Query: 203 KLKDKSLDAKKIDGKGIQIEVRSIGNATDQNH------VGS------------LDAKKID 244
KL++K +DAKKIDG+GI+ E R IGNAT QNH +G+ +DAKKID
Sbjct: 208 KLQNKGVDAKKIDGRGIRAEARPIGNATVQNHAVDGKKIGTWPNGKEKFQDKGVDAKKID 267
Query: 245 GKGIQGEVRSIGNAAGQNHVGNFDPRIDRLPKLVAKHFDRNLEATI 290
G+GI E R IGNAA QNH GN PR + K+FD+ LE +
Sbjct: 268 GRGICTEARPIGNAAVQNHAGNCHPRP------LEKNFDKTLEGRV 307
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 414 NAVSGVNHKKRKNIESNGVPRVNDSCPNKMLKPSSSSHPFTENGRILEPCQISIPNASYG 473
N++ G N KKRK I+SNGV +DS P+ ML SSSHPFTENGRILEPCQIS NAS G
Sbjct: 542 NSIIGDNLKKRKEIDSNGVLHAHDSRPS-MLPGPSSSHPFTENGRILEPCQISPINASDG 600
Query: 474 PGVA 477
P A
Sbjct: 601 PAAA 604
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MSRCFPFPPPGYEKKTRTDEVDLL 24
MSRCFPFPPPGYEKK+RTD+VDLL
Sbjct: 1 MSRCFPFPPPGYEKKSRTDDVDLL 24
>Medtr3g084030.5 | rhodanese/cell cycle control phosphatase
superfamily protein | LC | chr3:37957230-37933056 |
20130731
Length = 1330
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 124/226 (54%), Positives = 150/226 (66%), Gaps = 28/226 (12%)
Query: 86 ISTADDKGFSGQGGDHNVSSI-PKEIKQSGNKGILFENKLVKQYPGNNGESARENNHVAE 144
IS AD +G Q N ++ KEIKQ+ K LFE++L KQ+ NNGE ARENNH+AE
Sbjct: 117 ISAADGRGSPAQAQGLNAGNLHQKEIKQNDKKAFLFEDRLTKQHGSNNGEKARENNHLAE 176
Query: 145 ANKDSKFLLELDRRLKVNDGGAGNQLVQKVTTDTAHTKDEGTVRLVAK--GSGPWSDGKE 202
NKDSKFL+ELDRR++ NDGGAG QLVQ+ TT KDEGTVRLVAK G+G W DGKE
Sbjct: 177 ENKDSKFLMELDRRVRNNDGGAGTQLVQQSTTADCR-KDEGTVRLVAKISGTGTWPDGKE 235
Query: 203 KLKDKSLDAKKIDGKGIQIEVRSIGNATDQNH------VGS------------LDAKKID 244
KL++K +DAKKIDG+GI+ E R IGNAT QNH +G+ +DAKKID
Sbjct: 236 KLQNKGVDAKKIDGRGIRAEARPIGNATVQNHAVDGKKIGTWPNGKEKFQDKGVDAKKID 295
Query: 245 GKGIQGEVRSIGNAAGQNHVGNFDPRIDRLPKLVAKHFDRNLEATI 290
G+GI E R IGNAA QNH GN PR + K+FD+ LE +
Sbjct: 296 GRGICTEARPIGNAAVQNHAGNCHPRP------LEKNFDKTLEGRV 335
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 414 NAVSGVNHKKRKNIESNGVPRVNDSCPNKMLKPSSSSHPFTENGRILEPCQISIPNASYG 473
N++ G N KKRK I+SNGV +DS P+ ML SSSHPFTENGRILEPCQIS NAS G
Sbjct: 522 NSIIGDNLKKRKEIDSNGVLHAHDSRPS-MLPGPSSSHPFTENGRILEPCQISPINASDG 580
Query: 474 PGVA 477
P A
Sbjct: 581 PAAA 584
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/24 (91%), Positives = 24/24 (100%)
Query: 1 MSRCFPFPPPGYEKKTRTDEVDLL 24
MSRCFPFPPPGYEKK+RTD+VDLL
Sbjct: 29 MSRCFPFPPPGYEKKSRTDDVDLL 52
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 15/71 (21%)
Query: 377 EQSKFKESNNIGPLGVNSFPRISTNSYENAVSGVNL---------------ENAVSGVNH 421
EQ+K K+SN G + NS ++S NS+EN++ GVNL EN+++G N
Sbjct: 398 EQNKLKDSNKAGLVDPNSSTQVSKNSHENSIIGVNLKKRNEIDSNGVLHAHENSITGGNL 457
Query: 422 KKRKNIESNGV 432
KKRK I+SNGV
Sbjct: 458 KKRKEIDSNGV 468
>Medtr8g081570.1 | hypothetical protein | LC |
chr8:35185084-35193104 | 20130731
Length = 583
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 130/207 (62%), Gaps = 31/207 (14%)
Query: 84 NKISTADDKGFSGQGGDHNVSSIPKEIKQSGNKGILFENKLVKQYPGNNGESARENNHVA 143
+K STAD KG SGQ N + KEIK KG+ +NK++KQY G+NGE ARENNH+A
Sbjct: 115 SKTSTADGKGLSGQAEGLNAGKLQKEIKPD-KKGLFVDNKIIKQYNGHNGEMARENNHLA 173
Query: 144 EANKDSKFLLELDRRLKVNDGGAGNQLVQKVTTDTAHTKDEGTVRLVAKGSGPWSDGKEK 203
E NKD KFLLE +RR+K ++GGAGNQLVQK T ++ H DEGTV+ +A+ SG DG EK
Sbjct: 174 EENKDPKFLLEFERRIKDDNGGAGNQLVQKFT-NSNHRMDEGTVKFMARSSGTLRDGGEK 232
Query: 204 LKDKSLDAKKIDGKGIQIEVRSIGNATDQNHVGSLDAKKIDGKGIQGEVRSIGNAAGQNH 263
L+DK LDAKK IDGKG+ EVR +GN QNH
Sbjct: 233 LRDKGLDAKK-----------------------------IDGKGMLAEVRPLGNTTVQNH 263
Query: 264 VGNFDPRIDRLPKLVAKHFDRNLEATI 290
GNF P+ D +P + K+FD+NLEATI
Sbjct: 264 AGNFHPKADGIPIPMGKYFDKNLEATI 290
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 77/108 (71%), Gaps = 10/108 (9%)
Query: 370 HTELKATEQSKFKESNNIGPLGVNSFPRISTNSYENAVSGVNLENAVSGVNHKKRKNIES 429
HTELK TE +K KESN GP+ NSF +IS N +EN+V GV N KKRK ES
Sbjct: 367 HTELKTTELNKLKESNIGGPIHSNSFTQISKNGHENSV-GVE--------NPKKRKETES 417
Query: 430 NGVPRVNDSCPNKMLKPSSSSHPFTENGRILEPCQISIPNASYGPGVA 477
NGV R N++ P+K+ +PSSS HP TENGRILE CQISIPNAS GPG+A
Sbjct: 418 NGVLRANENWPSKLPRPSSS-HPLTENGRILEACQISIPNASDGPGIA 464
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/24 (100%), Positives = 24/24 (100%)
Query: 1 MSRCFPFPPPGYEKKTRTDEVDLL 24
MSRCFPFPPPGYEKKTRTDEVDLL
Sbjct: 25 MSRCFPFPPPGYEKKTRTDEVDLL 48
>Medtr8g081570.2 | hypothetical protein | LC |
chr8:35183759-35193906 | 20130731
Length = 559
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 130/207 (62%), Gaps = 31/207 (14%)
Query: 84 NKISTADDKGFSGQGGDHNVSSIPKEIKQSGNKGILFENKLVKQYPGNNGESARENNHVA 143
+K STAD KG SGQ N + KEIK KG+ +NK++KQY G+NGE ARENNH+A
Sbjct: 91 SKTSTADGKGLSGQAEGLNAGKLQKEIKPD-KKGLFVDNKIIKQYNGHNGEMARENNHLA 149
Query: 144 EANKDSKFLLELDRRLKVNDGGAGNQLVQKVTTDTAHTKDEGTVRLVAKGSGPWSDGKEK 203
E NKD KFLLE +RR+K ++GGAGNQLVQK T ++ H DEGTV+ +A+ SG DG EK
Sbjct: 150 EENKDPKFLLEFERRIKDDNGGAGNQLVQKFT-NSNHRMDEGTVKFMARSSGTLRDGGEK 208
Query: 204 LKDKSLDAKKIDGKGIQIEVRSIGNATDQNHVGSLDAKKIDGKGIQGEVRSIGNAAGQNH 263
L+DK LDAKK IDGKG+ EVR +GN QNH
Sbjct: 209 LRDKGLDAKK-----------------------------IDGKGMLAEVRPLGNTTVQNH 239
Query: 264 VGNFDPRIDRLPKLVAKHFDRNLEATI 290
GNF P+ D +P + K+FD+NLEATI
Sbjct: 240 AGNFHPKADGIPIPMGKYFDKNLEATI 266
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/108 (61%), Positives = 77/108 (71%), Gaps = 10/108 (9%)
Query: 370 HTELKATEQSKFKESNNIGPLGVNSFPRISTNSYENAVSGVNLENAVSGVNHKKRKNIES 429
HTELK TE +K KESN GP+ NSF +IS N +EN+V GV N KKRK ES
Sbjct: 343 HTELKTTELNKLKESNIGGPIHSNSFTQISKNGHENSV-GVE--------NPKKRKETES 393
Query: 430 NGVPRVNDSCPNKMLKPSSSSHPFTENGRILEPCQISIPNASYGPGVA 477
NGV R N++ P+K+ +PSSS HP TENGRILE CQISIPNAS GPG+A
Sbjct: 394 NGVLRANENWPSKLPRPSSS-HPLTENGRILEACQISIPNASDGPGIA 440
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/24 (100%), Positives = 24/24 (100%)
Query: 1 MSRCFPFPPPGYEKKTRTDEVDLL 24
MSRCFPFPPPGYEKKTRTDEVDLL
Sbjct: 1 MSRCFPFPPPGYEKKTRTDEVDLL 24
>Medtr3g084030.2 | rhodanese/cell cycle control phosphatase
superfamily protein | LC | chr3:37958546-37933056 |
20130731
Length = 960
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/65 (64%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 414 NAVSGVNHKKRKNIESNGVPRVNDSCPNKMLKPSSSSHPFTENGRILEPCQISIPNASYG 473
N++ G N KKRK I+SNGV +DS P+ ML SSSHPFTENGRILEPCQIS NAS G
Sbjct: 152 NSIIGDNLKKRKEIDSNGVLHAHDSRPS-MLPGPSSSHPFTENGRILEPCQISPINASDG 210
Query: 474 PGVAN 478
P A
Sbjct: 211 PAAAT 215