Miyakogusa Predicted Gene

Lj4g3v2576090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2576090.1 tr|G7JBC0|G7JBC0_MEDTR Protein transport protein
Sec23 OS=Medicago truncatula GN=MTR_3g084740 PE=4
S,74.3,0,vWA-like,NULL; Zn-finger domain of Sec23/24,Zinc finger,
Sec23/Sec24-type; beta-sandwich domain of S,TC62100.path2.1
         (213 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g084740.1 | protein transporter Sec23-like protein | HC | ...   330   7e-91
Medtr3g084740.2 | protein transporter Sec23-like protein | HC | ...   329   1e-90
Medtr8g011270.1 | protein transporter Sec23-like protein | HC | ...   241   3e-64
Medtr1g105605.1 | protein transporter Sec23-like protein | HC | ...   118   4e-27
Medtr1g105605.2 | protein transporter Sec23-like protein | HC | ...   118   4e-27
Medtr7g111710.1 | protein transporter Sec23-like protein | HC | ...    52   5e-07
Medtr7g111710.2 | protein transporter Sec23-like protein | HC | ...    52   5e-07
Medtr7g110640.1 | protein transporter Sec23-like protein | HC | ...    49   4e-06

>Medtr3g084740.1 | protein transporter Sec23-like protein | HC |
           chr3:38270252-38263566 | 20130731
          Length = 771

 Score =  330 bits (845), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 159/214 (74%), Positives = 181/214 (84%), Gaps = 6/214 (2%)

Query: 1   MAHLA--DPEGIDGVRMTWNVWPGSKVEASKCVIPLAATIPVTIPHHYHHDIPTVPYTPL 58
           M+ +A  DPEGIDGVRMTWNVWP SKVE+SKCVIPLAATI +      H DIP++PY PL
Sbjct: 1   MSEMANTDPEGIDGVRMTWNVWPRSKVESSKCVIPLAATISLI---RSHPDIPSLPYAPL 57

Query: 59  RCKSCSSLLNPFCIVDFTAKIWICPFCFSRNTFPPHYAQISPTNLPAELYPQYTTLQYTI 118
           RCK+C+S+LNP+  VDFTAKIWICPFC+ RN FPPHY  IS TNLP ELYPQYTT++Y I
Sbjct: 58  RCKTCTSILNPYSRVDFTAKIWICPFCYQRNHFPPHYNAISETNLPGELYPQYTTVEYHI 117

Query: 119 PNPNPNPQPH-VFLFLLDTCIIPEEMDYVKSALQRAIGLLPDNALVGFISFGTQVQVHEL 177
           P+ +PNP P  VFLFLLDTCII EE++Y+KSAL RAIGLLPDNALVGF+SFGTQVQVHEL
Sbjct: 118 PHTDPNPPPSPVFLFLLDTCIIEEEINYLKSALGRAIGLLPDNALVGFLSFGTQVQVHEL 177

Query: 178 AFSDMSKVYVFRGNKEITKDQVLEQLGLGGSGVA 211
            FSDMSKVYVFRG+KEI+KDQ+LEQLGL  S  A
Sbjct: 178 GFSDMSKVYVFRGSKEISKDQILEQLGLASSNSA 211


>Medtr3g084740.2 | protein transporter Sec23-like protein | HC |
           chr3:38270164-38263958 | 20130731
          Length = 702

 Score =  329 bits (843), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 159/214 (74%), Positives = 181/214 (84%), Gaps = 6/214 (2%)

Query: 1   MAHLA--DPEGIDGVRMTWNVWPGSKVEASKCVIPLAATIPVTIPHHYHHDIPTVPYTPL 58
           M+ +A  DPEGIDGVRMTWNVWP SKVE+SKCVIPLAATI +      H DIP++PY PL
Sbjct: 1   MSEMANTDPEGIDGVRMTWNVWPRSKVESSKCVIPLAATISLI---RSHPDIPSLPYAPL 57

Query: 59  RCKSCSSLLNPFCIVDFTAKIWICPFCFSRNTFPPHYAQISPTNLPAELYPQYTTLQYTI 118
           RCK+C+S+LNP+  VDFTAKIWICPFC+ RN FPPHY  IS TNLP ELYPQYTT++Y I
Sbjct: 58  RCKTCTSILNPYSRVDFTAKIWICPFCYQRNHFPPHYNAISETNLPGELYPQYTTVEYHI 117

Query: 119 PNPNPNPQPH-VFLFLLDTCIIPEEMDYVKSALQRAIGLLPDNALVGFISFGTQVQVHEL 177
           P+ +PNP P  VFLFLLDTCII EE++Y+KSAL RAIGLLPDNALVGF+SFGTQVQVHEL
Sbjct: 118 PHTDPNPPPSPVFLFLLDTCIIEEEINYLKSALGRAIGLLPDNALVGFLSFGTQVQVHEL 177

Query: 178 AFSDMSKVYVFRGNKEITKDQVLEQLGLGGSGVA 211
            FSDMSKVYVFRG+KEI+KDQ+LEQLGL  S  A
Sbjct: 178 GFSDMSKVYVFRGSKEISKDQILEQLGLASSNSA 211


>Medtr8g011270.1 | protein transporter Sec23-like protein | HC |
           chr8:2969140-2977863 | 20130731
          Length = 763

 Score =  241 bits (615), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 112/200 (56%), Positives = 149/200 (74%), Gaps = 3/200 (1%)

Query: 6   DPEGIDGVRMTWNVWPGSKVEASKCVIPLAATIPVTIPHHYHHDIPTVPYTPLRCKSCSS 65
           D E  DGVRM WNV PG+K E+   V+P+AA   +  P  +   +P +PY+PLRC++C S
Sbjct: 7   DLETQDGVRMPWNVIPGTKQESVNVVVPVAA---IYTPIKHFPTMPILPYSPLRCRTCRS 63

Query: 66  LLNPFCIVDFTAKIWICPFCFSRNTFPPHYAQISPTNLPAELYPQYTTLQYTIPNPNPNP 125
           +LNPFCIVDF AKIWICPFCF RN FP HYA IS  N+PAEL+PQYTT++Y   N +   
Sbjct: 64  ILNPFCIVDFAAKIWICPFCFQRNHFPNHYASISEDNMPAELFPQYTTVEYDSVNDSGPH 123

Query: 126 QPHVFLFLLDTCIIPEEMDYVKSALQRAIGLLPDNALVGFISFGTQVQVHELAFSDMSKV 185
            P VFLF++DTC+I EE+ +++SA+ +A+ LLPDN+LVG I+FG+ V VHEL F  + K 
Sbjct: 124 VPPVFLFVVDTCVIEEEIGFLRSAISQAVELLPDNSLVGLITFGSFVHVHELGFGIVPKT 183

Query: 186 YVFRGNKEITKDQVLEQLGL 205
           YVFRGNK+++K+Q+LEQ+  
Sbjct: 184 YVFRGNKDLSKEQLLEQMSF 203


>Medtr1g105605.1 | protein transporter Sec23-like protein | HC |
           chr1:47599557-47596521 | 20130731
          Length = 746

 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 10/202 (4%)

Query: 8   EGIDGVRMTWNVWPGSKVEASKCVIPLAATIPVTIPHHYHHDIPTVPYTPLRCKSCSSLL 67
           E ++G+R +WN WP +    S   IPL  TI  T    +  D+P +PY PL C  C ++L
Sbjct: 7   EAVEGLRWSWNSWPSTT--KSDLTIPL--TIMCTPLSQHGTDLPLLPYDPLLCTRCGAVL 62

Query: 68  NPFCIVDFTAKIWICPFCFSRNTFPPHYAQISPTNLPAELYPQYTTLQYTIPNPNPNP-- 125
           NP+  +D+ ++IW CPFC  RN FP     I+  NLPAEL+P YTT++Y+  + + +   
Sbjct: 63  NPYARLDYQSRIWHCPFCSQRNPFP---RSIADANLPAELFPTYTTVEYSSSSSSSSSSL 119

Query: 126 -QPHVFLFLLDTCIIPEEMDYVKSALQRAIGLLPDNALVGFISFGTQVQVHELAFSDMSK 184
             P  F+F++D     +E+  +K+ +   +  LPD ALV  I+F + V +H++ FS  S+
Sbjct: 120 FHPPAFIFVIDVSTSQDELCSLKNEILLLLHHLPDTALVALITFDSMVYLHDIQFSHCSR 179

Query: 185 VYVFRGNKEITKDQVLEQLGLG 206
           + +  G  + + DQ+ + L + 
Sbjct: 180 IVLLHGEHQFSSDQIRQFLNIS 201


>Medtr1g105605.2 | protein transporter Sec23-like protein | HC |
           chr1:47599557-47596521 | 20130731
          Length = 746

 Score =  118 bits (296), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 10/202 (4%)

Query: 8   EGIDGVRMTWNVWPGSKVEASKCVIPLAATIPVTIPHHYHHDIPTVPYTPLRCKSCSSLL 67
           E ++G+R +WN WP +    S   IPL  TI  T    +  D+P +PY PL C  C ++L
Sbjct: 7   EAVEGLRWSWNSWPSTT--KSDLTIPL--TIMCTPLSQHGTDLPLLPYDPLLCTRCGAVL 62

Query: 68  NPFCIVDFTAKIWICPFCFSRNTFPPHYAQISPTNLPAELYPQYTTLQYTIPNPNPNP-- 125
           NP+  +D+ ++IW CPFC  RN FP     I+  NLPAEL+P YTT++Y+  + + +   
Sbjct: 63  NPYARLDYQSRIWHCPFCSQRNPFP---RSIADANLPAELFPTYTTVEYSSSSSSSSSSL 119

Query: 126 -QPHVFLFLLDTCIIPEEMDYVKSALQRAIGLLPDNALVGFISFGTQVQVHELAFSDMSK 184
             P  F+F++D     +E+  +K+ +   +  LPD ALV  I+F + V +H++ FS  S+
Sbjct: 120 FHPPAFIFVIDVSTSQDELCSLKNEILLLLHHLPDTALVALITFDSMVYLHDIQFSHCSR 179

Query: 185 VYVFRGNKEITKDQVLEQLGLG 206
           + +  G  + + DQ+ + L + 
Sbjct: 180 IVLLHGEHQFSSDQIRQFLNIS 201


>Medtr7g111710.1 | protein transporter Sec23-like protein | HC |
           chr7:45883109-45872270 | 20130731
          Length = 1020

 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 27/201 (13%)

Query: 13  VRMTWNVWPGSKVEASKCVIPLAATIPVTIPHHYHHDIPTVPYTP---LRCKSCSSLLNP 69
           +R T +  P S+  AS+  +PL A +          ++P + + P   +RC+ C + +NP
Sbjct: 303 LRFTTSAIPSSQSLASRWHLPLGAVVCPLAESPDEDEVPIISFAPASVVRCRRCRTYVNP 362

Query: 70  FCIVDFTAKIWICPFCFSRNTFPP-HYAQISPTNLPAEL--YPQYT--TLQYTIPNP--- 121
           +       + + C  C   N  P  +YAQ+  T    +L   P+ T  T+++  P     
Sbjct: 363 YVTFTEAGRKFRCNVCTLLNDVPSEYYAQLDATGKRVDLNQRPELTKGTVEFVAPAEYMV 422

Query: 122 NPNPQPHVFLFLLDTCIIPEEMDYVKSALQRAIGLLPD-----NALVGFISFGTQV---- 172
            P P P V+ FL+D  I       ++ A Q     L +        +GF +F + +    
Sbjct: 423 RP-PMPPVYFFLIDVSISAVRSGMIEVAAQTIKSCLDELPGYPRTQIGFATFDSTIHFYN 481

Query: 173 ------QVHELAFSDMSKVYV 187
                 Q   L  SD+  +++
Sbjct: 482 MKSTLAQPQMLVVSDLDDIFI 502


>Medtr7g111710.2 | protein transporter Sec23-like protein | HC |
           chr7:45883073-45872270 | 20130731
          Length = 1020

 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 84/201 (41%), Gaps = 27/201 (13%)

Query: 13  VRMTWNVWPGSKVEASKCVIPLAATIPVTIPHHYHHDIPTVPYTP---LRCKSCSSLLNP 69
           +R T +  P S+  AS+  +PL A +          ++P + + P   +RC+ C + +NP
Sbjct: 303 LRFTTSAIPSSQSLASRWHLPLGAVVCPLAESPDEDEVPIISFAPASVVRCRRCRTYVNP 362

Query: 70  FCIVDFTAKIWICPFCFSRNTFPP-HYAQISPTNLPAEL--YPQYT--TLQYTIPNP--- 121
           +       + + C  C   N  P  +YAQ+  T    +L   P+ T  T+++  P     
Sbjct: 363 YVTFTEAGRKFRCNVCTLLNDVPSEYYAQLDATGKRVDLNQRPELTKGTVEFVAPAEYMV 422

Query: 122 NPNPQPHVFLFLLDTCIIPEEMDYVKSALQRAIGLLPD-----NALVGFISFGTQV---- 172
            P P P V+ FL+D  I       ++ A Q     L +        +GF +F + +    
Sbjct: 423 RP-PMPPVYFFLIDVSISAVRSGMIEVAAQTIKSCLDELPGYPRTQIGFATFDSTIHFYN 481

Query: 173 ------QVHELAFSDMSKVYV 187
                 Q   L  SD+  +++
Sbjct: 482 MKSTLAQPQMLVVSDLDDIFI 502


>Medtr7g110640.1 | protein transporter Sec23-like protein | HC |
           chr7:45343900-45348480 | 20130731
          Length = 851

 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 10/162 (6%)

Query: 57  PLRCKSCSSLLNPFCIVDFTAKIWICPFCFSRNTFPPHYAQISPTNL---PAELYPQYTT 113
           P RC+SC +  N +C +   +  W C  C   N     Y   S  +L   P    P    
Sbjct: 182 PHRCQSCGAYANIYCNILLGSGQWQCVICRKLNASDGEYIAHSKEDLHRFPELSSPMVDY 241

Query: 114 LQYTIPNPNPNPQPHVFL-----FLLDTCIIPEEMDYVKSALQRAIGLLPDNALVGFISF 168
           +Q     P   P     +      ++D C+    + +++S+L   +  LP    +G I +
Sbjct: 242 VQTGTKRPGFVPVSDSRMSAPVVLVIDECLDEPHLQHLQSSLHAFVDSLPPTTRLGIILY 301

Query: 169 GTQVQVHELAFSDMSKVYVFRGNKEITKDQVLEQLGLGGSGV 210
           G  V V++     ++   V  G+K  ++D  L+ L L G+G+
Sbjct: 302 GRTVSVYDFLEESVASADVLPGDKSPSEDS-LKAL-LYGTGI 341