Miyakogusa Predicted Gene

Lj4g3v2575000.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2575000.1 Non Characterized Hit- tr|I1K3Q0|I1K3Q0_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,59.76,4e-19,coiled-coil,NULL,CUFF.51157.1
         (82 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g080910.1 | phragmoplast-associated kinesin-related protei...    91   3e-19
Medtr3g084790.1 | phragmoplast-associated kinesin-related protei...    80   6e-16

>Medtr8g080910.1 | phragmoplast-associated kinesin-related protein |
            HC | chr8:34947024-34938642 | 20130731
          Length = 1160

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 50/83 (60%), Positives = 63/83 (75%), Gaps = 2/83 (2%)

Query: 1    MDKLKKKHAEEISVLNELIAKTRLP-EEDVQPPCDDSVIPTYDDTKMSHPLNNQFESFYY 59
            +DKLKKK+  EIS LN+L+AK+RLP EE +QP C+  V+PT  DTK+++ ++ QFE  Y 
Sbjct: 1079 IDKLKKKYEIEISTLNDLLAKSRLPMEEAIQPTCNGFVMPTDYDTKVANNVS-QFEPSYN 1137

Query: 60   EEDGELEKLAEQSPFSGYDRCNI 82
            EEDGEL KL EQS FSG D CNI
Sbjct: 1138 EEDGELAKLKEQSWFSGSDICNI 1160


>Medtr3g084790.1 | phragmoplast-associated kinesin-related protein |
            HC | chr3:38288838-38295581 | 20130731
          Length = 1246

 Score = 79.7 bits (195), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 55/83 (66%), Gaps = 1/83 (1%)

Query: 1    MDKLKKKHAEEISVLNELIAKTRLPEEDVQPPCDDSVIPTYDDTKMSHPLNNQFESF-YY 59
            +DKLKKKH +E+  LNEL+++ RL ++ + P  DD V+P YDD        ++FE F   
Sbjct: 1164 IDKLKKKHEKEVVSLNELVSEARLQKKSIPPVYDDVVMPNYDDDSKEPHCVSEFEPFNNI 1223

Query: 60   EEDGELEKLAEQSPFSGYDRCNI 82
             EDGEL KLAE S FS YDRCNI
Sbjct: 1224 AEDGELAKLAEPSWFSSYDRCNI 1246