Miyakogusa Predicted Gene

Lj4g3v2573880.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2573880.1 Non Characterized Hit- tr|G7LHB2|G7LHB2_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,75.2,0,NnrU,NnrU; seg,NULL,CUFF.51144.1
         (367 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g097190.1 | 15-cis-zeta-carotene isomerase | HC | chr8:348...   532   e-151
Medtr3g084950.1 | 15-cis-zeta-carotene isomerase | HC | chr3:383...   520   e-148
Medtr8g097190.2 | 15-cis-zeta-carotene isomerase | HC | chr8:348...   335   4e-92

>Medtr8g097190.1 | 15-cis-zeta-carotene isomerase | HC |
           chr8:34877733-34874418 | 20130731
          Length = 364

 Score =  532 bits (1371), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 269/371 (72%), Positives = 303/371 (81%), Gaps = 11/371 (2%)

Query: 1   MASSPLVFSAPFSSIPHRTSSTKTHLRQPFSLPLSSS--RPKQSFSSVFXXXXXXXXXXX 58
           MAS+PLVFS   SS     S    H     SLP SS   + KQSF   +           
Sbjct: 1   MASTPLVFSTSISS----KSHLLHHHPHLNSLPSSSLCFKSKQSFQ--YFSSNPLLLSHK 54

Query: 59  XXXXXXVAEDKADT--ADSNLVVGEDSAVFDLQSQKISSWVYFTVILGVVLFALNVVWID 116
                  +E++A T   DS+LV GEDSA FD+Q+QK+SSW YFT +LGVVL  LNV+WID
Sbjct: 55  LVTRVSSSEERATTQVTDSDLV-GEDSATFDIQNQKLSSWFYFTAVLGVVLSVLNVIWID 113

Query: 117 PSTGFGKDFVDAVSGISDSPEVVMLLLILIFAGVHSGLASFRDTGEKLIGERAFRVLFAG 176
            STGFGK FVD++SGISDS EVVML+L+LIFAGVHSGLASFRDTGEKLIGERA+RVLFAG
Sbjct: 114 DSTGFGKAFVDSISGISDSHEVVMLVLVLIFAGVHSGLASFRDTGEKLIGERAYRVLFAG 173

Query: 177 TSLPLALTTIVYFINHRYDGFQLWQLQNVPGLHQLLWLSNFISFYFLYPSTFNLLEVAAV 236
           TSLPLALT IVYFINHRYDG QLWQLQ+VPG+HQL+W+SNFISF FLYP+TFNLLEVAAV
Sbjct: 174 TSLPLALTMIVYFINHRYDGLQLWQLQDVPGVHQLVWISNFISFLFLYPATFNLLEVAAV 233

Query: 237 DKPKLHLWETGIMRITRHPQLVGQVIWCLAHTIWIGNSVAVAASVGLIGHHLFGAWNGDR 296
           DKPKLHL+ETGIMRITRHPQ+VGQV+WCLAHT+WIGNSVAVAAS  LI HHLFG WNGDR
Sbjct: 234 DKPKLHLYETGIMRITRHPQMVGQVMWCLAHTVWIGNSVAVAASFALIAHHLFGVWNGDR 293

Query: 297 RLAKRYGEDFDLVKERTSIVPFAAILDGRQRLPKDFYKEFIRLPYLTITFLTLGAYFAHP 356
           +LA+RYGEDF++VK RTS+VPFAAILDGRQ+LPKDFYKEFIRLPY TIT LTLGAYFAHP
Sbjct: 294 KLAERYGEDFEIVKGRTSVVPFAAILDGRQKLPKDFYKEFIRLPYFTITALTLGAYFAHP 353

Query: 357 LMQSASFNLHW 367
           LM++AS  LHW
Sbjct: 354 LMRAASLKLHW 364


>Medtr3g084950.1 | 15-cis-zeta-carotene isomerase | HC |
           chr3:38379823-38382588 | 20130731
          Length = 358

 Score =  520 bits (1339), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 244/289 (84%), Positives = 269/289 (93%)

Query: 79  VGEDSAVFDLQSQKISSWVYFTVILGVVLFALNVVWIDPSTGFGKDFVDAVSGISDSPEV 138
           VGEDSA F+L  QKI+SW+YF  ILGVVLF LNVVWID STGFGK FVDAVSG+SDS EV
Sbjct: 70  VGEDSAAFNLTEQKITSWIYFAAILGVVLFILNVVWIDNSTGFGKAFVDAVSGLSDSHEV 129

Query: 139 VMLLLILIFAGVHSGLASFRDTGEKLIGERAFRVLFAGTSLPLALTTIVYFINHRYDGFQ 198
           VML+LIL+FA  HSG+AS R+TGEK+IGERAFRV+FAG SLPLA+TTIVYFINHRYDG Q
Sbjct: 130 VMLILILVFAVFHSGMASLRNTGEKIIGERAFRVIFAGISLPLAVTTIVYFINHRYDGIQ 189

Query: 199 LWQLQNVPGLHQLLWLSNFISFYFLYPSTFNLLEVAAVDKPKLHLWETGIMRITRHPQLV 258
           LWQLQ+ PG+HQLLWLSNFISF+FLYPSTFNLLE+AAVDKPK+HL+ETGI+RITRHPQ+V
Sbjct: 190 LWQLQSTPGIHQLLWLSNFISFFFLYPSTFNLLEIAAVDKPKIHLYETGIIRITRHPQMV 249

Query: 259 GQVIWCLAHTIWIGNSVAVAASVGLIGHHLFGAWNGDRRLAKRYGEDFDLVKERTSIVPF 318
           GQVIWCLAHTIWIGNSVAVAAS+GLI HHLFGAWNGDRRLA+R+GEDF++VK RTSIVPF
Sbjct: 250 GQVIWCLAHTIWIGNSVAVAASIGLISHHLFGAWNGDRRLAQRHGEDFEIVKRRTSIVPF 309

Query: 319 AAILDGRQRLPKDFYKEFIRLPYLTITFLTLGAYFAHPLMQSASFNLHW 367
           AAILDGRQRLP DFYKEFIRLPYL IT LTLGAYFAHPLMQ+ASFNLHW
Sbjct: 310 AAILDGRQRLPADFYKEFIRLPYLVITALTLGAYFAHPLMQTASFNLHW 358


>Medtr8g097190.2 | 15-cis-zeta-carotene isomerase | HC |
           chr8:34877717-34874418 | 20130731
          Length = 267

 Score =  335 bits (859), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 180/273 (65%), Positives = 205/273 (75%), Gaps = 11/273 (4%)

Query: 1   MASSPLVFSAPFSSIPHRTSSTKTHLRQPFSLPLSSS--RPKQSFSSVFXXXXXXXXXXX 58
           MAS+PLVFS   SS     S    H     SLP SS   + KQSF   +           
Sbjct: 1   MASTPLVFSTSISS----KSHLLHHHPHLNSLPSSSLCFKSKQSFQ--YFSSNPLLLSHK 54

Query: 59  XXXXXXVAEDKADT--ADSNLVVGEDSAVFDLQSQKISSWVYFTVILGVVLFALNVVWID 116
                  +E++A T   DS+LV GEDSA FD+Q+QK+SSW YFT +LGVVL  LNV+WID
Sbjct: 55  LVTRVSSSEERATTQVTDSDLV-GEDSATFDIQNQKLSSWFYFTAVLGVVLSVLNVIWID 113

Query: 117 PSTGFGKDFVDAVSGISDSPEVVMLLLILIFAGVHSGLASFRDTGEKLIGERAFRVLFAG 176
            STGFGK FVD++SGISDS EVVML+L+LIFAGVHSGLASFRDTGEKLIGERA+RVLFAG
Sbjct: 114 DSTGFGKAFVDSISGISDSHEVVMLVLVLIFAGVHSGLASFRDTGEKLIGERAYRVLFAG 173

Query: 177 TSLPLALTTIVYFINHRYDGFQLWQLQNVPGLHQLLWLSNFISFYFLYPSTFNLLEVAAV 236
           TSLPLALT IVYFINHRYDG QLWQLQ+VPG+HQL+W+SNFISF FLYP+TFNLLEVAAV
Sbjct: 174 TSLPLALTMIVYFINHRYDGLQLWQLQDVPGVHQLVWISNFISFLFLYPATFNLLEVAAV 233

Query: 237 DKPKLHLWETGIMRITRHPQLVGQVIWCLAHTI 269
           DKPKLHL+ETGIMRITRHPQ+      C+   I
Sbjct: 234 DKPKLHLYETGIMRITRHPQVYSNPNNCIDQKI 266