Miyakogusa Predicted Gene

Lj4g3v2573620.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2573620.1 tr|Q0J0I6|Q0J0I6_ORYSJ Os09g0507400 protein
OS=Oryza sativa subsp. japonica GN=Os09g0507400 PE=2
SV=,46.9,0.000000000000006,seg,NULL,CUFF.51128.1
         (132 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g097040.2 | transmembrane protein, putative | HC | chr8:34...   167   2e-42
Medtr8g097040.1 | transmembrane protein, putative | HC | chr8:34...   167   2e-42
Medtr3g084990.1 | transmembrane protein, putative | HC | chr3:38...   138   1e-33
Medtr5g078400.1 | transmembrane protein, putative | HC | chr5:33...    71   3e-13
Medtr7g028805.1 | transmembrane protein, putative | HC | chr7:99...    55   3e-08

>Medtr8g097040.2 | transmembrane protein, putative | HC |
           chr8:34809661-34806484 | 20130731
          Length = 131

 Score =  167 bits (424), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 90/125 (72%), Positives = 103/125 (82%), Gaps = 7/125 (5%)

Query: 12  NSRVFCELSALVFNLL-RSHPTPVSFPDRAPIVPVRPSESPLARRSSTAGQITPAGFAAL 70
            SR+ CELS+LVFNLL +S  TP+S+ DR+PIVPV PS   + RRSS AGQITPAGFAA 
Sbjct: 10  QSRMICELSSLVFNLLLQSSTTPLSYSDRSPIVPVHPS---VLRRSSAAGQITPAGFAAF 66

Query: 71  LLGISVSLMLCGSVTFFLGFMLMPWVIGLVMVLYVAGVVTSLSVIGRSIF---YPRKDFP 127
           +LGISV+LMLCGSVTF +GFMLMPWVIGLVMV YVAGVV+ LSV+GRSI     PRKD P
Sbjct: 67  VLGISVALMLCGSVTFVIGFMLMPWVIGLVMVFYVAGVVSFLSVLGRSILCFASPRKDSP 126

Query: 128 EWKLI 132
           EWKL+
Sbjct: 127 EWKLL 131


>Medtr8g097040.1 | transmembrane protein, putative | HC |
           chr8:34809301-34806610 | 20130731
          Length = 131

 Score =  167 bits (424), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 90/125 (72%), Positives = 103/125 (82%), Gaps = 7/125 (5%)

Query: 12  NSRVFCELSALVFNLL-RSHPTPVSFPDRAPIVPVRPSESPLARRSSTAGQITPAGFAAL 70
            SR+ CELS+LVFNLL +S  TP+S+ DR+PIVPV PS   + RRSS AGQITPAGFAA 
Sbjct: 10  QSRMICELSSLVFNLLLQSSTTPLSYSDRSPIVPVHPS---VLRRSSAAGQITPAGFAAF 66

Query: 71  LLGISVSLMLCGSVTFFLGFMLMPWVIGLVMVLYVAGVVTSLSVIGRSIF---YPRKDFP 127
           +LGISV+LMLCGSVTF +GFMLMPWVIGLVMV YVAGVV+ LSV+GRSI     PRKD P
Sbjct: 67  VLGISVALMLCGSVTFVIGFMLMPWVIGLVMVFYVAGVVSFLSVLGRSILCFASPRKDSP 126

Query: 128 EWKLI 132
           EWKL+
Sbjct: 127 EWKLL 131


>Medtr3g084990.1 | transmembrane protein, putative | HC |
           chr3:38403633-38405497 | 20130731
          Length = 130

 Score =  138 bits (348), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 75/130 (57%), Positives = 93/130 (71%), Gaps = 18/130 (13%)

Query: 12  NSRVFCELSALVFNLLRSHPTPVSFPDRAPIVPVRPSESPLARRSSTAGQITPAGFAALL 71
            SR F +LSA++ NLLRS PTP++F +  P  P+R    P         QI+PAGFA+LL
Sbjct: 10  QSRAFYDLSAILLNLLRSPPTPLNFSNHPPEQPLRRLPPP---------QISPAGFASLL 60

Query: 72  LGISVSLMLCGSVTFFLGFMLMPWVIGLVMVLYVAGVVTSLSVIGRSIFY---------P 122
           LGIS++LMLCGSVTFF+GF+LMPWVIGL+MVLYVAG+VT+LS IGRS+           P
Sbjct: 61  LGISMALMLCGSVTFFIGFVLMPWVIGLIMVLYVAGIVTTLSDIGRSVLCYIMAAPEPPP 120

Query: 123 RKDFPEWKLI 132
           RKD P WKL+
Sbjct: 121 RKDIPAWKLM 130


>Medtr5g078400.1 | transmembrane protein, putative | HC |
          chr5:33530158-33529928 | 20130731
          Length = 76

 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 9/76 (11%)

Query: 18 ELSALVFNLLRSHPTPVSFPDRAPIVPVRPSESPLARRSSTAGQITPAGFAALLLGISVS 77
          ELSA+V NL RS P P++  +  P  P+R    P         QI+PAGFA+ LLGIS++
Sbjct: 5  ELSAIVLNLPRSPPMPLNISNHPPEQPLRRLPPP---------QISPAGFASFLLGISMA 55

Query: 78 LMLCGSVTFFLGFMLM 93
          LM CGSVTFF+GF+LM
Sbjct: 56 LMFCGSVTFFIGFVLM 71


>Medtr7g028805.1 | transmembrane protein, putative | HC |
           chr7:9930700-9931125 | 20130731
          Length = 141

 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/63 (53%), Positives = 48/63 (76%)

Query: 57  STAGQITPAGFAALLLGISVSLMLCGSVTFFLGFMLMPWVIGLVMVLYVAGVVTSLSVIG 116
           ST+ + +PA FA+L  GI V+LML GSVTF +G +L+PW+  LV+V YVA  V++LS++G
Sbjct: 65  STSPKDSPAAFASLFFGICVALMLFGSVTFLIGLLLLPWITLLVLVFYVAAFVSNLSLLG 124

Query: 117 RSI 119
           R I
Sbjct: 125 RFI 127