Miyakogusa Predicted Gene
- Lj4g3v2573620.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2573620.1 tr|Q0J0I6|Q0J0I6_ORYSJ Os09g0507400 protein
OS=Oryza sativa subsp. japonica GN=Os09g0507400 PE=2
SV=,46.9,0.000000000000006,seg,NULL,CUFF.51128.1
(132 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g097040.2 | transmembrane protein, putative | HC | chr8:34... 167 2e-42
Medtr8g097040.1 | transmembrane protein, putative | HC | chr8:34... 167 2e-42
Medtr3g084990.1 | transmembrane protein, putative | HC | chr3:38... 138 1e-33
Medtr5g078400.1 | transmembrane protein, putative | HC | chr5:33... 71 3e-13
Medtr7g028805.1 | transmembrane protein, putative | HC | chr7:99... 55 3e-08
>Medtr8g097040.2 | transmembrane protein, putative | HC |
chr8:34809661-34806484 | 20130731
Length = 131
Score = 167 bits (424), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/125 (72%), Positives = 103/125 (82%), Gaps = 7/125 (5%)
Query: 12 NSRVFCELSALVFNLL-RSHPTPVSFPDRAPIVPVRPSESPLARRSSTAGQITPAGFAAL 70
SR+ CELS+LVFNLL +S TP+S+ DR+PIVPV PS + RRSS AGQITPAGFAA
Sbjct: 10 QSRMICELSSLVFNLLLQSSTTPLSYSDRSPIVPVHPS---VLRRSSAAGQITPAGFAAF 66
Query: 71 LLGISVSLMLCGSVTFFLGFMLMPWVIGLVMVLYVAGVVTSLSVIGRSIF---YPRKDFP 127
+LGISV+LMLCGSVTF +GFMLMPWVIGLVMV YVAGVV+ LSV+GRSI PRKD P
Sbjct: 67 VLGISVALMLCGSVTFVIGFMLMPWVIGLVMVFYVAGVVSFLSVLGRSILCFASPRKDSP 126
Query: 128 EWKLI 132
EWKL+
Sbjct: 127 EWKLL 131
>Medtr8g097040.1 | transmembrane protein, putative | HC |
chr8:34809301-34806610 | 20130731
Length = 131
Score = 167 bits (424), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/125 (72%), Positives = 103/125 (82%), Gaps = 7/125 (5%)
Query: 12 NSRVFCELSALVFNLL-RSHPTPVSFPDRAPIVPVRPSESPLARRSSTAGQITPAGFAAL 70
SR+ CELS+LVFNLL +S TP+S+ DR+PIVPV PS + RRSS AGQITPAGFAA
Sbjct: 10 QSRMICELSSLVFNLLLQSSTTPLSYSDRSPIVPVHPS---VLRRSSAAGQITPAGFAAF 66
Query: 71 LLGISVSLMLCGSVTFFLGFMLMPWVIGLVMVLYVAGVVTSLSVIGRSIF---YPRKDFP 127
+LGISV+LMLCGSVTF +GFMLMPWVIGLVMV YVAGVV+ LSV+GRSI PRKD P
Sbjct: 67 VLGISVALMLCGSVTFVIGFMLMPWVIGLVMVFYVAGVVSFLSVLGRSILCFASPRKDSP 126
Query: 128 EWKLI 132
EWKL+
Sbjct: 127 EWKLL 131
>Medtr3g084990.1 | transmembrane protein, putative | HC |
chr3:38403633-38405497 | 20130731
Length = 130
Score = 138 bits (348), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 93/130 (71%), Gaps = 18/130 (13%)
Query: 12 NSRVFCELSALVFNLLRSHPTPVSFPDRAPIVPVRPSESPLARRSSTAGQITPAGFAALL 71
SR F +LSA++ NLLRS PTP++F + P P+R P QI+PAGFA+LL
Sbjct: 10 QSRAFYDLSAILLNLLRSPPTPLNFSNHPPEQPLRRLPPP---------QISPAGFASLL 60
Query: 72 LGISVSLMLCGSVTFFLGFMLMPWVIGLVMVLYVAGVVTSLSVIGRSIFY---------P 122
LGIS++LMLCGSVTFF+GF+LMPWVIGL+MVLYVAG+VT+LS IGRS+ P
Sbjct: 61 LGISMALMLCGSVTFFIGFVLMPWVIGLIMVLYVAGIVTTLSDIGRSVLCYIMAAPEPPP 120
Query: 123 RKDFPEWKLI 132
RKD P WKL+
Sbjct: 121 RKDIPAWKLM 130
>Medtr5g078400.1 | transmembrane protein, putative | HC |
chr5:33530158-33529928 | 20130731
Length = 76
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 9/76 (11%)
Query: 18 ELSALVFNLLRSHPTPVSFPDRAPIVPVRPSESPLARRSSTAGQITPAGFAALLLGISVS 77
ELSA+V NL RS P P++ + P P+R P QI+PAGFA+ LLGIS++
Sbjct: 5 ELSAIVLNLPRSPPMPLNISNHPPEQPLRRLPPP---------QISPAGFASFLLGISMA 55
Query: 78 LMLCGSVTFFLGFMLM 93
LM CGSVTFF+GF+LM
Sbjct: 56 LMFCGSVTFFIGFVLM 71
>Medtr7g028805.1 | transmembrane protein, putative | HC |
chr7:9930700-9931125 | 20130731
Length = 141
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 48/63 (76%)
Query: 57 STAGQITPAGFAALLLGISVSLMLCGSVTFFLGFMLMPWVIGLVMVLYVAGVVTSLSVIG 116
ST+ + +PA FA+L GI V+LML GSVTF +G +L+PW+ LV+V YVA V++LS++G
Sbjct: 65 STSPKDSPAAFASLFFGICVALMLFGSVTFLIGLLLLPWITLLVLVFYVAAFVSNLSLLG 124
Query: 117 RSI 119
R I
Sbjct: 125 RFI 127