Miyakogusa Predicted Gene
- Lj4g3v2526040.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2526040.1 Non Characterized Hit- tr|I1KRZ4|I1KRZ4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13592 PE,75.64,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; DEAD-like
helicases superfamily,Helicase,,CUFF.51091.1
(760 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC | ... 1159 0.0
Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein... 221 2e-57
Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC | ... 218 2e-56
Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC | ... 218 3e-56
Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC | ... 207 3e-53
Medtr5g026590.1 | ATP-dependent DNA helicase RecQ family protein... 183 4e-46
Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC | chr3:28... 176 6e-44
Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC | ... 99 1e-20
Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC | ... 99 1e-20
Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC | ... 99 1e-20
Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC | ... 99 1e-20
Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like prote... 86 2e-16
Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 85 3e-16
Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like prote... 85 3e-16
Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 83 1e-15
Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 82 1e-15
Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like prote... 77 6e-14
Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like prote... 77 6e-14
Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like prote... 74 5e-13
Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 73 9e-13
Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 73 1e-12
Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 72 2e-12
Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 72 2e-12
Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 68 3e-11
Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 67 8e-11
Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like prote... 64 5e-10
Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like prote... 64 5e-10
Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 64 7e-10
Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 62 2e-09
Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 62 3e-09
Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 62 3e-09
Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 62 3e-09
Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family pro... 60 6e-09
Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like prote... 59 1e-08
Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC | ch... 59 1e-08
Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC | ch... 59 1e-08
Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC | ch... 59 1e-08
Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC | ch... 59 1e-08
Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC | ch... 59 1e-08
Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC | ch... 59 1e-08
Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC | ch... 59 1e-08
Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC | ch... 59 1e-08
Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC | ch... 59 1e-08
Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC | c... 59 1e-08
Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like prote... 59 3e-08
Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 59 3e-08
Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like prote... 58 3e-08
Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like prote... 58 4e-08
Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family pro... 57 8e-08
Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like prote... 56 1e-07
Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 55 3e-07
Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC | chr... 55 4e-07
Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 52 3e-06
Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 52 3e-06
Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 52 3e-06
Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like prote... 52 3e-06
Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 51 3e-06
Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family pro... 51 5e-06
Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC | chr... 51 6e-06
Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC | chr... 50 6e-06
>Medtr8g080160.1 | RecQ family ATP-dependent DNA helicase | HC |
chr8:34428957-34437037 | 20130731
Length = 917
Score = 1159 bits (2997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 559/687 (81%), Positives = 604/687 (87%), Gaps = 5/687 (0%)
Query: 72 NAAQQQKKQRGRCKTREIDCEAVEEAVSAARDEVSDENLVKLLQLIYGYECFREGQLEAI 131
NA QQ+KK E +CE +EEAV AARD+ SDENLVKLL+LI+G++ FREGQLEAI
Sbjct: 231 NAKQQEKKN-----GWENECEVLEEAVLAARDDASDENLVKLLKLIHGFDSFREGQLEAI 285
Query: 132 KMVLAGKSTMLILPTGAGKSLCYQLPAMILPGITLVVSPLVALIIDQLKQLPSCIRGALI 191
K VLAGKSTMLILPTGAGKSLCYQL A+ILPGITLVVSPLVAL+IDQL+QLP I GAL+
Sbjct: 286 KNVLAGKSTMLILPTGAGKSLCYQLSALILPGITLVVSPLVALMIDQLRQLPPLISGALL 345
Query: 192 SSTQTLEEASETLVQLREGAIKVLFVSPERFLNEEFLSTISAGSAVSLVVIDEAHCISEW 251
SS QT EE+SETL QLR+G IKVLFVSPERFLNEEFLS IS G AVSLVVIDEAHCISEW
Sbjct: 346 SSAQTFEESSETLNQLRQGTIKVLFVSPERFLNEEFLSVISGGLAVSLVVIDEAHCISEW 405
Query: 252 SHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDN 311
SHNFRPSFMRLRASLLHK LNVGS+LAM LDAI+SALDIPRTNLIQ A LRDN
Sbjct: 406 SHNFRPSFMRLRASLLHKSLNVGSILAMTATATTTTLDAIMSALDIPRTNLIQNAHLRDN 465
Query: 312 FHLSVSMVKNRMKDLLLLIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSG 371
LSVS++KNRMKDLL+L+KSSPFAEV+SII+YCKFQ ETD ISRYLNDNNI AKSYHSG
Sbjct: 466 LCLSVSLIKNRMKDLLVLMKSSPFAEVKSIIVYCKFQSETDQISRYLNDNNIKAKSYHSG 525
Query: 372 ITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGR 431
I++KER YVQELF SNKIRVVVATVAFGMGLDKRDVGAVIHYSLP SLEEYVQEIGRAGR
Sbjct: 526 ISAKERGYVQELFGSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPGSLEEYVQEIGRAGR 585
Query: 432 DGRLSYCHLFYDDETYFKLRSLMYSEGVDEYAVNKFLREVFPSDKNSCGKICSLIKESAS 491
DGRLSYCHLFYDDE YFKLRSLMYSEG+DEYAVNKFL EVFP+DK+SCGKICSLIKE AS
Sbjct: 586 DGRLSYCHLFYDDEMYFKLRSLMYSEGIDEYAVNKFLSEVFPADKSSCGKICSLIKEPAS 645
Query: 492 RMFDMKEEVMLTLLTRLELGDVQYLHVLPPINVTCVLNFHKTPPPFLAKKDSAIAVIIKR 551
R FDMKEEV+LT+LTRLELGDVQYLH+LP N TCVLNFH TP LA+K SAIA I+KR
Sbjct: 646 RRFDMKEEVILTVLTRLELGDVQYLHLLPQTNATCVLNFHMTPAVSLAQKVSAIAAILKR 705
Query: 552 SESKTGQYVFDIPTVANDMGVTAVELTNQLSNLKVMGEITYEMKDLAYCYRIVEIPTDLF 611
SE+K GQY FDIPTVANDMGVT VELTNQL LK+ GEITYEMKD+AYCYRI+E P D F
Sbjct: 706 SENKHGQYTFDIPTVANDMGVTPVELTNQLYALKLKGEITYEMKDMAYCYRILEAPADFF 765
Query: 612 SLSADVTQWLSEVEICKVRKMDAMFNAAYFAVNLCDKMHGCSNANHTPCLQRKILDYFAG 671
SLSAD+T+WLSEVE CKVRKMDAMFNAAYFAVNLCDKM GCS+++HT CLQR ILDYFAG
Sbjct: 766 SLSADITRWLSEVECCKVRKMDAMFNAAYFAVNLCDKMSGCSSSDHTSCLQRIILDYFAG 825
Query: 672 VDNTDFCKKISQSSPFLRADIKVFLQSNSQARFTPRAVARIMHGIASPAYPSTTWCKTHF 731
VDN DFCKKI QSS FLRADIKVFLQSNS ARFTPRAVAR+MHGIASPAYP T W KTHF
Sbjct: 826 VDNADFCKKIDQSSRFLRADIKVFLQSNSHARFTPRAVARVMHGIASPAYPYTIWGKTHF 885
Query: 732 WGRYKNVDFKVVMEAAKSELKNYVGKD 758
WGRY +DF VVMEAAK ELK ++GKD
Sbjct: 886 WGRYTKIDFNVVMEAAKEELKTFIGKD 912
>Medtr2g006440.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr2:578880-586948 | 20130731
Length = 1159
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/353 (35%), Positives = 200/353 (56%), Gaps = 12/353 (3%)
Query: 117 IYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMILPGITLVVSPLVALII 176
++G FR Q E I ++G +++PTG GKSL YQLPA+I PGITLV+SPLV+LI
Sbjct: 403 VFGNHSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQLPALINPGITLVISPLVSLIQ 462
Query: 177 DQLKQL-PSCIRGALISSTQTLEEASETLVQLREG--AIKVLFVSPERFLNEEFL----S 229
DQ+ L + I A +S+ E E L +L K+L+V+PE+ + L
Sbjct: 463 DQIMHLLQANIPAAYLSANLEWAEQQEILRELNSDYCKYKLLYVTPEKVARSDVLLRQLE 522
Query: 230 TISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXLD 289
++ +S +VIDEAHC+S+W H+FRP + L +L ++ VLA+ +
Sbjct: 523 SLHGRELLSRIVIDEAHCVSQWGHDFRPDYQGL--GVLKQKFPNTPVLALTATATASVKE 580
Query: 290 AIISALDIPRTNLIQKAQLRDNFHLSV-SMVKNRMKDLLLLIKSSPFAEVQSIIIYCKFQ 348
++ AL + + +++ R N SV K ++D+ I+ + F E IIYC +
Sbjct: 581 DVVQALGLVNCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIRENHFDECG--IIYCLSR 638
Query: 349 IETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVG 408
++ + ++ L + YH + +R++VQ +S ++I ++ ATVAFGMG++K DV
Sbjct: 639 MDCEKVAEKLQECGHKCAFYHGSMDPDQRAHVQRQWSKDEINIICATVAFGMGINKPDVR 698
Query: 409 AVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSLMYSEGVDE 461
VIH+SLP+S+E Y QE GRAGRDG+ S C L+Y Y +++ ++ V++
Sbjct: 699 FVIHHSLPKSVEGYHQECGRAGRDGQRSSCVLYYSYSDYIRVKHMLSVGAVEQ 751
>Medtr2g042440.1 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525936-18516322 | 20130731
Length = 728
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 208/364 (57%), Gaps = 18/364 (4%)
Query: 106 SDENLVKLLQLIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMILPGIT 165
S E+LVK+L+ +GY FR QLEAI+ VL+G+ ++PTG GKS+CYQ+PA+ GI
Sbjct: 26 SKESLVKVLRWHFGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEGIV 85
Query: 166 LVVSPLVALIIDQLKQLPS-CIRGALISSTQTLEEASETLVQLREG--AIKVLFVSPERF 222
LVV PL+AL+ +Q+ L I +SST+T + + L G + ++L+V+PE
Sbjct: 86 LVVCPLIALMENQVMALKEKGIAAEFLSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPELI 145
Query: 223 LNEEFLST---ISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAM 279
F+S I + +SL+ IDEAHCIS W H+FRP++ +L S L L +LA+
Sbjct: 146 ATPGFMSKLTKIHSRGLLSLIAIDEAHCISSWGHDFRPTYRKL--STLRSHLPDVPILAL 203
Query: 280 XXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQ 339
++ +L + +++ + R N + V R KDLL S ++
Sbjct: 204 TATAVPKVQKDVVESLHMQNALILKTSFNRPNIYYEV-----RYKDLLDDSYSDLSDRLK 258
Query: 340 SI-----IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVA 394
S+ IIYC + D +S +L+ I +YH+G+ +K R+ V + S+K +VVVA
Sbjct: 259 SMGDVCAIIYCLERSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVA 318
Query: 395 TVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSLM 454
TVAFGMG+D++DV V H+++P+S+E + QE GRAGRD S L+Y + ++ ++
Sbjct: 319 TVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDDRRRMEFIL 378
Query: 455 YSEG 458
+ G
Sbjct: 379 RNSG 382
>Medtr2g042440.2 | RecQ family ATP-dependent DNA helicase | HC |
chr2:18525893-18516340 | 20130731
Length = 727
Score = 218 bits (554), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 208/364 (57%), Gaps = 18/364 (4%)
Query: 106 SDENLVKLLQLIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMILPGIT 165
S E+LVK+L+ +GY FR QLEAI+ VL+G+ ++PTG GKS+CYQ+PA+ GI
Sbjct: 26 SKESLVKVLRWHFGYPDFRGLQLEAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKEGIV 85
Query: 166 LVVSPLVALIIDQLKQLPS-CIRGALISSTQTLEEASETLVQLREG--AIKVLFVSPERF 222
LVV PL+AL+ +Q+ L I +SST+T + + L G + ++L+V+PE
Sbjct: 86 LVVCPLIALMENQVMALKEKGIAAEFLSSTKTAKAKDKIHEDLGSGKPSTRLLYVTPELI 145
Query: 223 LNEEFLST---ISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAM 279
F+S I + +SL+ IDEAHCIS W H+FRP++ +L S L L +LA+
Sbjct: 146 ATPGFMSKLTKIHSRGLLSLIAIDEAHCISSWGHDFRPTYRKL--STLRSHLPDVPILAL 203
Query: 280 XXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQ 339
++ +L + +++ + R N + V R KDLL S ++
Sbjct: 204 TATAVPKVQKDVVESLHMQNALILKTSFNRPNIYYEV-----RYKDLLDDSYSDLSDRLK 258
Query: 340 SI-----IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVA 394
S+ IIYC + D +S +L+ I +YH+G+ +K R+ V + S+K +VVVA
Sbjct: 259 SMGDVCAIIYCLERSMCDDLSAHLSQRGISCAAYHAGLNNKMRTSVLHDWISSKTKVVVA 318
Query: 395 TVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSLM 454
TVAFGMG+D++DV V H+++P+S+E + QE GRAGRD S L+Y + ++ ++
Sbjct: 319 TVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDDRRRMEFIL 378
Query: 455 YSEG 458
+ G
Sbjct: 379 RNSG 382
>Medtr1g083840.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37328725-37334465 | 20130731
Length = 603
Score = 207 bits (527), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 122/345 (35%), Positives = 199/345 (57%), Gaps = 14/345 (4%)
Query: 116 LIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMILPGITLVVSPLVALI 175
+I+G + R Q +A K LA + + +++PTG GKSLCYQLPA + PG+T+VVSPL++LI
Sbjct: 195 VIFGNKSLRPLQHQACKAALAKQDSFILMPTGGGKSLCYQLPATLQPGVTVVVSPLLSLI 254
Query: 176 IDQL--KQLPSCIRGALISSTQTLEEASETLVQLREG--AIKVLFVSPERFL-NEEF--- 227
DQ+ L I ++S Q +A+ L +LR+ + K+L+V+PER N+ F
Sbjct: 255 QDQIITLNLKFGIPATFLNSQQNASQAAAVLQELRKDKPSCKLLYVTPERIAGNQSFVGI 314
Query: 228 LSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXX 287
L + ++ V+DEAHC+S+W H+FRP + L + L + V+A+
Sbjct: 315 LKCMHQKGQLAGFVVDEAHCVSQWGHDFRPDYRGLGS--LKQNFPRVPVMALTATATHPV 372
Query: 288 LDAIISALDIPRTNLIQKAQLRDNFHLSVSM-VKNRMKDLLLLIKSSPFAEVQSIIIYCK 346
+ I++AL IP +++++ R N V + K +K L L+ + Q I+YC
Sbjct: 373 REDILNALRIPHAIVLERSFDRPNLKYEVIVKTKEPLKQLGQLLMDR--FKSQCGIVYCL 430
Query: 347 FQIETDTISRYLNDN-NILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKR 405
+ E +S++LN+ I A YH+G+ +++R VQ+ + ++ +V AT+AFGMG+DK
Sbjct: 431 SKSECVDVSKFLNEKCKIKAAYYHAGLAARQRVAVQKKWHDGEVHIVCATIAFGMGIDKA 490
Query: 406 DVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKL 450
DV VIH ++ +S+E Y QE GRAGRD + C Y + + ++
Sbjct: 491 DVRFVIHNTMSKSIESYYQESGRAGRDNLPAVCIALYQKKDFSRV 535
>Medtr5g026590.1 | ATP-dependent DNA helicase RecQ family protein |
HC | chr5:10949368-10935495 | 20130731
Length = 685
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/334 (33%), Positives = 181/334 (54%), Gaps = 25/334 (7%)
Query: 117 IYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMILPGITLVVSPLVALII 176
I+G +R Q E I +L+G+ ++I+ G GKSLCYQLPA++ G+ LVVSPL++LI
Sbjct: 84 IFGISSYRANQKEIINAILSGRDVLVIMAAGGGKSLCYQLPAVLRNGVALVVSPLLSLIQ 143
Query: 177 DQLKQLPSCIRGALISSTQTLEEASETLVQ----LREGAIKVLFVSPERFLNEEFLSTIS 232
DQ+ L + A + ++ T ++ + +Q G +K+L+V+PE+ ++
Sbjct: 144 DQVMGLTALGIPAYMLTSTTSKDNEKVYIQSFWRRARGDLKLLYVTPEKITKKQ------ 197
Query: 233 AGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXLDAII 292
I EAHC S+W H+FRP + L +L + ++A+ + ++
Sbjct: 198 --------EIYEAHCCSQWGHDFRPDYKNL--GILKTQFPNVPMVALTATATQRVQNDLV 247
Query: 293 SALDIPRTNLIQKAQLRDNFHLSV----SMVKNRMKDLLLLIKSSPFAEVQSIIIYCKFQ 348
L I R R N V S+ K + ++ I+ S + +S I+YC +
Sbjct: 248 EMLHIRRCVKFVSTVNRPNLFYMVKEKSSVSKVVVDEIAEFIQES-YPNHESGIVYCFSR 306
Query: 349 IETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVG 408
E + +++ L + I A YH+ + +R V +S+NK++V+V TVAFGMG++K DV
Sbjct: 307 KECEQVAKELRERGISAGHYHADMDVNDREKVHMRWSNNKLQVIVGTVAFGMGINKPDVR 366
Query: 409 AVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFY 442
VIH+SL +S+E Y QE GRAGRDG S C L++
Sbjct: 367 FVIHHSLSKSMETYYQESGRAGRDGLPSECLLYF 400
>Medtr3g063040.1 | ATP-dependent DNA helicase RecQ | HC |
chr3:28524625-28534220 | 20130731
Length = 908
Score = 176 bits (447), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 116/351 (33%), Positives = 184/351 (52%), Gaps = 19/351 (5%)
Query: 108 ENLVKLLQLIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMILPGITLV 167
+ + +L+ +G+ FR Q E I+ ++ + ++++ TG+GKSLCYQ+P +++ +V
Sbjct: 2 DTTLSVLKDYFGFLSFRPYQREVIEKIIEKRDCLVVMATGSGKSLCYQVPPLVVKKTGIV 61
Query: 168 VSPLVALIIDQLKQLPS-CIRGALISSTQ---TLEEASETLVQLREGAIKVLFVSPER-- 221
VSPL++L+ DQ+ L I+ +SS Q T++ +E G +LF++PE+
Sbjct: 62 VSPLISLMQDQVMALKQRGIKAEYLSSAQKDYTVQSKAE------RGQFDILFMTPEKAC 115
Query: 222 FLNEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXX 281
+ F S + +SL +DEAHCISEW H+FR + +L L L+V V
Sbjct: 116 TIPTSFWSNL-LKEGISLFAVDEAHCISEWGHDFRVEYKQLD-KLRGVLLDVPYVGLTAT 173
Query: 282 XXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMK---DLLLLIKSSPFAEV 338
D I ++L + ++ + R N V NR + D L+ S A
Sbjct: 174 ATEKVRFD-ITNSLKMNNPYVVVGSFDRPNLFYGVKQF-NRGQSFIDELVEEVSKEVANG 231
Query: 339 QSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAF 398
S IIYC + + I + L + I A YH + K R LF ++++++VAT+AF
Sbjct: 232 CSTIIYCTTIKDVEQIYKSLTEVGINAGMYHGQMDGKSREESHRLFVRDEMQIMVATIAF 291
Query: 399 GMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFK 449
GMG+DK ++ VIHY P++LE Y QE GR GRDG S C L+Y + K
Sbjct: 292 GMGIDKPNIRKVIHYGCPKNLESYYQESGRCGRDGIASVCWLYYTRSDFAK 342
>Medtr1g083250.1 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043455 | 20130731
Length = 876
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 102/189 (53%), Gaps = 9/189 (4%)
Query: 93 AVEEAVSAARDEVSDENLVKLLQLIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSL 152
AV A+ A D ++ LLQ +G+ + Q EA+ + + +++ TG+GKSL
Sbjct: 137 AVAHAIDVASDWQQKASI--LLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSL 194
Query: 153 CYQLPAMILPGITLVVSPLVALIIDQ-LKQLPSCIRGALISSTQTLEEASETLVQLREGA 211
C+Q+PA++ + +V+SPL++L+ DQ LK I + S Q + ++ G
Sbjct: 195 CFQIPALLTGKVVVVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMR---GM 251
Query: 212 IKVLFVSPERFLNE-EFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKR 270
++++ PE L + L ++ ++L IDE HC+S+W H+FRP++ RL S+L +
Sbjct: 252 YSIVYICPETVLRLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRL--SVLREN 309
Query: 271 LNVGSVLAM 279
G + ++
Sbjct: 310 FTTGKLKSL 318
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
IIY + +T I++YL + + A +Y++G+ + F N + VVVAT+AFGMG
Sbjct: 510 IIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMG 569
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYD------------DETYFK 449
+DK +V +IHY P+SLE Y QE GRAGRDG+L+ C L+ + E K
Sbjct: 570 IDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLARKPSLLPSRRSEDMTK 629
Query: 450 LRSLMYSEGVDEYAVN------KFLREVFPSD--KNSCGKICSLIKESASRMFDMKEEVM 501
+M S+ Y +N K L E F D C +C + + ++KEE
Sbjct: 630 QAYIMLSDCF-RYGMNTSCCRAKILVEYFGEDFSHQKC-LLCDVCNNGPPQRLNLKEEAC 687
Query: 502 LTLLTRLELGDVQYLHV 518
+ L T + G+ + V
Sbjct: 688 ILLQTIMLAGNARSYSV 704
>Medtr1g083250.3 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050056-37045638 | 20130731
Length = 614
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 103/189 (54%), Gaps = 9/189 (4%)
Query: 95 EEAVSAARDEVSD--ENLVKLLQLIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSL 152
+ AV+ A D SD + LLQ +G+ + Q EA+ + + +++ TG+GKSL
Sbjct: 135 DSAVAHAIDVASDWQQKASILLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSL 194
Query: 153 CYQLPAMILPGITLVVSPLVALIIDQ-LKQLPSCIRGALISSTQTLEEASETLVQLREGA 211
C+Q+PA++ + +V+SPL++L+ DQ LK I + S Q + ++ G
Sbjct: 195 CFQIPALLTGKVVVVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMR---GM 251
Query: 212 IKVLFVSPERFLNE-EFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKR 270
++++ PE L + L ++ ++L IDE HC+S+W H+FRP++ RL S+L +
Sbjct: 252 YSIVYICPETVLRLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRL--SVLREN 309
Query: 271 LNVGSVLAM 279
G + ++
Sbjct: 310 FTTGKLKSL 318
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 65/101 (64%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
IIY + +T I++YL + + A +Y++G+ + F N + VVVAT+AFGMG
Sbjct: 510 IIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMG 569
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFY 442
+DK +V +IHY P+SLE Y QE GRAGRDG+L+ C FY
Sbjct: 570 IDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCSKFY 610
>Medtr1g083250.4 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050237-37043472 | 20130731
Length = 768
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 102/189 (53%), Gaps = 9/189 (4%)
Query: 93 AVEEAVSAARDEVSDENLVKLLQLIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSL 152
AV A+ A D ++ LLQ +G+ + Q EA+ + + +++ TG+GKSL
Sbjct: 137 AVAHAIDVASDWQQKASI--LLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSL 194
Query: 153 CYQLPAMILPGITLVVSPLVALIIDQ-LKQLPSCIRGALISSTQTLEEASETLVQLREGA 211
C+Q+PA++ + +V+SPL++L+ DQ LK I + S Q + ++ G
Sbjct: 195 CFQIPALLTGKVVVVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMR---GM 251
Query: 212 IKVLFVSPERFLNE-EFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKR 270
++++ PE L + L ++ ++L IDE HC+S+W H+FRP++ RL S+L +
Sbjct: 252 YSIVYICPETVLRLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRL--SVLREN 309
Query: 271 LNVGSVLAM 279
G + ++
Sbjct: 310 FTTGKLKSL 318
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
IIY + +T I++YL + + A +Y++G+ + F N + VVVAT+AFGMG
Sbjct: 510 IIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMG 569
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYD------------DETYFK 449
+DK +V +IHY P+SLE Y QE GRAGRDG+L+ C L+ + E K
Sbjct: 570 IDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLARKPSLLPSRRSEDMTK 629
Query: 450 LRSLMYSEGVDEYAVN------KFLREVFPSD--KNSCGKICSLIKESASRMFDMKEEVM 501
+M S+ Y +N K L E F D C +C + + ++KEE
Sbjct: 630 QAYIMLSDCF-RYGMNTSCCRAKILVEYFGEDFSHQKC-LLCDVCNNGPPQRLNLKEEAC 687
Query: 502 LTLLTRLELGDVQYLHV 518
+ L T + G+ + V
Sbjct: 688 ILLQTIMLAGNARSYSV 704
>Medtr1g083250.2 | RecQ family ATP-dependent DNA helicase | HC |
chr1:37050187-37043472 | 20130731
Length = 768
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 102/189 (53%), Gaps = 9/189 (4%)
Query: 93 AVEEAVSAARDEVSDENLVKLLQLIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSL 152
AV A+ A D ++ LLQ +G+ + Q EA+ + + +++ TG+GKSL
Sbjct: 137 AVAHAIDVASDWQQKASI--LLQKHFGFSSLKSFQKEALSAWIDHRDCLVLAATGSGKSL 194
Query: 153 CYQLPAMILPGITLVVSPLVALIIDQ-LKQLPSCIRGALISSTQTLEEASETLVQLREGA 211
C+Q+PA++ + +V+SPL++L+ DQ LK I + S Q + ++ G
Sbjct: 195 CFQIPALLTGKVVVVISPLISLMHDQCLKLTKHGISACFLGSGQPDNTVEKKAMR---GM 251
Query: 212 IKVLFVSPERFLNE-EFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKR 270
++++ PE L + L ++ ++L IDE HC+S+W H+FRP++ RL S+L +
Sbjct: 252 YSIVYICPETVLRLIQPLQKLAETRGIALFAIDEVHCVSKWGHDFRPAYSRL--SVLREN 309
Query: 271 LNVGSVLAM 279
G + ++
Sbjct: 310 FTTGKLKSL 318
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
IIY + +T I++YL + + A +Y++G+ + F N + VVVAT+AFGMG
Sbjct: 510 IIYVPTRKDTVRIAKYLCKSGVKAAAYNAGLPKLHLRRTHKEFHENTLEVVVATIAFGMG 569
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYD------------DETYFK 449
+DK +V +IHY P+SLE Y QE GRAGRDG+L+ C L+ + E K
Sbjct: 570 IDKSNVRRIIHYGWPQSLEAYYQEAGRAGRDGKLADCILYANLARKPSLLPSRRSEDMTK 629
Query: 450 LRSLMYSEGVDEYAVN------KFLREVFPSD--KNSCGKICSLIKESASRMFDMKEEVM 501
+M S+ Y +N K L E F D C +C + + ++KEE
Sbjct: 630 QAYIMLSDCF-RYGMNTSCCRAKILVEYFGEDFSHQKC-LLCDVCNNGPPQRLNLKEEAC 687
Query: 502 LTLLTRLELGDVQYLHV 518
+ L T + G+ + V
Sbjct: 688 ILLQTIMLAGNARSYSV 704
>Medtr2g100230.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:43035445-43041856 | 20130731
Length = 499
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 148/345 (42%), Gaps = 51/345 (14%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMIL--------PG---ITLVVSPLVALI 175
Q + M L G+ + I TG+GK+L Y LPA++ PG I LV++P L
Sbjct: 122 QSQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPILDPGDGPIVLVLAPTRELA 181
Query: 176 IDQLKQ-----------LPSCIRGALISSTQTLEEASETLVQLREGAIKVLFVSPERFLN 224
+ Q++Q +CI G + Q + L++G ++++ +P R ++
Sbjct: 182 V-QIQQEATKFGASSRIKSTCIYGGVPKGPQVRD--------LQKG-VEIIIATPGRLID 231
Query: 225 EEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRL-------RASLLHKRLNVGSVL 277
S + V+ +V+DEA + + F P ++ R +L V
Sbjct: 232 M-LESNHTNLRRVTYLVLDEADRMLD--MGFDPQIRKIVSQIRPDRQTLYWSATWPKEVE 288
Query: 278 AMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAE 337
+ II + D+ + I++ ++ + K + L+ L++ +
Sbjct: 289 QLARQFLYNPYKVIIGSEDLKANHAIKQ-------YVDIVPEKQKYDKLVKLLED--IMD 339
Query: 338 VQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVA 397
I+I+ + D I+R L + A S H + ER +V F S K ++ AT
Sbjct: 340 GSRILIFMDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFKSGKSPIMTATDV 399
Query: 398 FGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFY 442
GLD +DV VI+Y P SLE+YV IGR GR G + F+
Sbjct: 400 AARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFF 444
>Medtr2g032630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 166/370 (44%), Gaps = 24/370 (6%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMIL---------PGIT-LVVSPLVALII 176
Q + + L G+ + I TG+GK+L Y +PA IL G T LV++P L
Sbjct: 522 QAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAFILLRQRRNNSLNGPTVLVLAPTRELAT 581
Query: 177 DQLKQLPSCIRGALISSTQTLEEASETLVQLRE---GAIKVLFVSPERFLNEEFLSTISA 233
+++ R + +S T L + +QL+E GA ++ +P R + + I
Sbjct: 582 QIQEEVFKFARSSRVSCT-CLYGGAPKALQLKELDRGA-DIVVATPGRLNDILEMKKIDF 639
Query: 234 GSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXLDAIIS 293
G VSL+V+DEA + + F P ++ + +R + D +++
Sbjct: 640 GQ-VSLLVLDEADRMLDMG--FEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAGDLLVN 696
Query: 294 ALDIPRTNLIQKAQLRD-NFHLSVSMVKNRMKDLLLLIKSSPFAEVQSIIIYCKFQIETD 352
+ + N+ + A + ++ V + + L +++S III+C + D
Sbjct: 697 PVQVNIGNVDELAANKSITQYVEVVPQMEKQRRLEQILRSQ--ERGSKIIIFCSTKKLCD 754
Query: 353 TISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIH 412
++R + A + H + ER +V F + K ++VAT GLD +D+ VI+
Sbjct: 755 QLARSIG-RTFGAAAIHGDKSQGERDWVLGQFRTGKSPILVATDVAARGLDIKDIRVVIN 813
Query: 413 YSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSLMYS-EGVDEYAVNKFLREV 471
Y P +E+YV IGR GR G + F+ ++ + L+ EG +++ + + LR++
Sbjct: 814 YDFPNGVEDYVHRIGRTGRAGATGVAYTFFSEQDWKHAGDLIKVLEGANQHVLPE-LRQI 872
Query: 472 FPSDKNSCGK 481
S GK
Sbjct: 873 ASRGPPSFGK 882
>Medtr2g032630.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr2:12277517-12285182 | 20130731
Length = 1175
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 166/370 (44%), Gaps = 24/370 (6%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMIL---------PGIT-LVVSPLVALII 176
Q + + L G+ + I TG+GK+L Y +PA IL G T LV++P L
Sbjct: 522 QAQTWPIALQGRDIVAIAKTGSGKTLGYLMPAFILLRQRRNNSLNGPTVLVLAPTRELAT 581
Query: 177 DQLKQLPSCIRGALISSTQTLEEASETLVQLRE---GAIKVLFVSPERFLNEEFLSTISA 233
+++ R + +S T L + +QL+E GA ++ +P R + + I
Sbjct: 582 QIQEEVFKFARSSRVSCT-CLYGGAPKALQLKELDRGA-DIVVATPGRLNDILEMKKIDF 639
Query: 234 GSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXLDAIIS 293
G VSL+V+DEA + + F P ++ + +R + D +++
Sbjct: 640 GQ-VSLLVLDEADRMLDMG--FEPQIRKIVNEIPPRRQTLMYTATWPKEVRKIAGDLLVN 696
Query: 294 ALDIPRTNLIQKAQLRD-NFHLSVSMVKNRMKDLLLLIKSSPFAEVQSIIIYCKFQIETD 352
+ + N+ + A + ++ V + + L +++S III+C + D
Sbjct: 697 PVQVNIGNVDELAANKSITQYVEVVPQMEKQRRLEQILRSQ--ERGSKIIIFCSTKKLCD 754
Query: 353 TISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIH 412
++R + A + H + ER +V F + K ++VAT GLD +D+ VI+
Sbjct: 755 QLARSIG-RTFGAAAIHGDKSQGERDWVLGQFRTGKSPILVATDVAARGLDIKDIRVVIN 813
Query: 413 YSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSLMYS-EGVDEYAVNKFLREV 471
Y P +E+YV IGR GR G + F+ ++ + L+ EG +++ + + LR++
Sbjct: 814 YDFPNGVEDYVHRIGRTGRAGATGVAYTFFSEQDWKHAGDLIKVLEGANQHVLPE-LRQI 872
Query: 472 FPSDKNSCGK 481
S GK
Sbjct: 873 ASRGPPSFGK 882
>Medtr3g467550.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857806-27867020 | 20130731
Length = 530
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 151/351 (43%), Gaps = 43/351 (12%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLP----AMILPGITLVVSPLVALIIDQLKQL 182
Q +A+ + L+G+ + TG+GK+ + +P + P I PL AL++ ++L
Sbjct: 112 QAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPL-ALVLAPTREL 170
Query: 183 PSCIRGALISSTQTLEEASETLV-----------QLREGAIKVLFVSPERFLNEEFLSTI 231
I + + +++LE +V +LR G +++ +P RF++
Sbjct: 171 AQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAG-VEIAVATPGRFIDHLQQGNT 229
Query: 232 SAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLL--HKRLNVGSVL-----AMXXXXX 284
S S +S VV+DEA + + F P + SL H+ L + + A+
Sbjct: 230 SL-SRISYVVLDEADRMLDM--GFEPQIREIMRSLPEKHQTLLFSATMPVEIEALSKEYL 286
Query: 285 XXXLDAIISALDIPRTNLIQK-AQLRDNFHLSVSMVKNRMKDLLLLIKSS------PFAE 337
+ + + P TN+ Q ++ +N + +R+ DLL+ S PF
Sbjct: 287 ASPVQVKVGKVSSPTTNVSQTLVKVSENEKI------DRLLDLLVEEASQAEKCGHPFPL 340
Query: 338 VQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVA 397
I++ + + D ++ L + A S H G + ER F S+ ++VAT
Sbjct: 341 T---IVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDV 397
Query: 398 FGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYF 448
GLD V VI+ LP++ E+Y+ IGR GR G FY D F
Sbjct: 398 ASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSFYTDRDMF 448
>Medtr3g467550.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857732-27867387 | 20130731
Length = 561
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 151/351 (43%), Gaps = 43/351 (12%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLP----AMILPGITLVVSPLVALIIDQLKQL 182
Q +A+ + L+G+ + TG+GK+ + +P + P I PL AL++ ++L
Sbjct: 143 QAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPL-ALVLAPTREL 201
Query: 183 PSCIRGALISSTQTLEEASETLV-----------QLREGAIKVLFVSPERFLNEEFLSTI 231
I + + +++LE +V +LR G +++ +P RF++
Sbjct: 202 AQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAG-VEIAVATPGRFIDHLQQGNT 260
Query: 232 SAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLL--HKRLNVGSVL-----AMXXXXX 284
S S +S VV+DEA + + F P + SL H+ L + + A+
Sbjct: 261 SL-SRISYVVLDEADRMLDM--GFEPQIREIMRSLPEKHQTLLFSATMPVEIEALSKEYL 317
Query: 285 XXXLDAIISALDIPRTNLIQK-AQLRDNFHLSVSMVKNRMKDLLLLIKSS------PFAE 337
+ + + P TN+ Q ++ +N + +R+ DLL+ S PF
Sbjct: 318 ASPVQVKVGKVSSPTTNVSQTLVKVSENEKI------DRLLDLLVEEASQAEKCGHPFPL 371
Query: 338 VQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVA 397
I++ + + D ++ L + A S H G + ER F S+ ++VAT
Sbjct: 372 T---IVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDV 428
Query: 398 FGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYF 448
GLD V VI+ LP++ E+Y+ IGR GR G FY D F
Sbjct: 429 ASRGLDVTGVSHVINLDLPKTTEDYIHRIGRTGRAGSTGIATSFYTDRDMF 479
>Medtr6g005550.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 142/340 (41%), Gaps = 36/340 (10%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI----------LPGITLVVSP---LVA 173
Q ++ + L K + I TG+GK+L Y LPA I + LV+SP L
Sbjct: 191 QAQSWPIALQSKDIVAIAKTGSGKTLGYLLPAFIHLKRTNNNAKMGPTVLVLSPTRELAT 250
Query: 174 LIIDQLKQLP-------SCIRGALISSTQTLEEASETLVQLREGAIKVLFVSPERFLNEE 226
I D+ + +C+ G Q L + GA ++ +P R +
Sbjct: 251 QIQDEAVKFSKTSRIACTCLYGGAPKGPQ--------LKDIDRGA-DIVVATPGRLNDIL 301
Query: 227 FLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXX 286
+ IS VS +V+DEA + + F P ++ + +R +
Sbjct: 302 EMRRISL-HQVSYLVLDEADRMLDMG--FEPQIRKIVNGVPARRQTLMFTATWPKEVRRI 358
Query: 287 XLDAIISALDIPRTNLIQ-KAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQSIIIYC 345
D +++ + + N+ + A H+ V + + L +++S + III+C
Sbjct: 359 AADLLVNPVQVNIGNVDELVANKSITQHIEVLTYVEKQRRLETILRSQ--DQGSKIIIFC 416
Query: 346 KFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKR 405
+ D ++R L A + H + +R +V F S + V+VAT GLD +
Sbjct: 417 STKKMCDQLARNLT-RQFGAAAIHGDKSQADRDHVLNQFRSGRTPVLVATDVAARGLDVK 475
Query: 406 DVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
D+ V+++ P +E+YV IGR GR G + F+ D+
Sbjct: 476 DIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTFFGDQ 515
>Medtr6g005550.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr6:822752-816182 | 20130731
Length = 718
Score = 77.0 bits (188), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 142/340 (41%), Gaps = 36/340 (10%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI----------LPGITLVVSP---LVA 173
Q ++ + L K + I TG+GK+L Y LPA I + LV+SP L
Sbjct: 191 QAQSWPIALQSKDIVAIAKTGSGKTLGYLLPAFIHLKRTNNNAKMGPTVLVLSPTRELAT 250
Query: 174 LIIDQLKQLP-------SCIRGALISSTQTLEEASETLVQLREGAIKVLFVSPERFLNEE 226
I D+ + +C+ G Q L + GA ++ +P R +
Sbjct: 251 QIQDEAVKFSKTSRIACTCLYGGAPKGPQ--------LKDIDRGA-DIVVATPGRLNDIL 301
Query: 227 FLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXX 286
+ IS VS +V+DEA + + F P ++ + +R +
Sbjct: 302 EMRRISL-HQVSYLVLDEADRMLDMG--FEPQIRKIVNGVPARRQTLMFTATWPKEVRRI 358
Query: 287 XLDAIISALDIPRTNLIQ-KAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQSIIIYC 345
D +++ + + N+ + A H+ V + + L +++S + III+C
Sbjct: 359 AADLLVNPVQVNIGNVDELVANKSITQHIEVLTYVEKQRRLETILRSQ--DQGSKIIIFC 416
Query: 346 KFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKR 405
+ D ++R L A + H + +R +V F S + V+VAT GLD +
Sbjct: 417 STKKMCDQLARNLT-RQFGAAAIHGDKSQADRDHVLNQFRSGRTPVLVATDVAARGLDVK 475
Query: 406 DVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
D+ V+++ P +E+YV IGR GR G + F+ D+
Sbjct: 476 DIRVVVNFDFPTGVEDYVHRIGRTGRAGATGIAYTFFGDQ 515
>Medtr4g105100.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:43543552-43548350 | 20130731
Length = 625
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 144/342 (42%), Gaps = 45/342 (13%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI--------LPG---ITLVVSPLVALI 175
Q + M L G+ + I TG+GK+L Y LPA++ + G + LV++P L
Sbjct: 228 QAQGWPMALTGRDLIGIAETGSGKTLSYLLPAIVHVSAQPRLVQGEGPVVLVLAPTRELA 287
Query: 176 IDQLKQLP-----------SCIRGALISSTQTLEEASETLVQLREGAIKVLFVSPERFLN 224
+ Q++Q +CI G Q + LR G ++++ +P R +
Sbjct: 288 V-QIQQEAMKFGSRSNIRCTCIYGGAPKGPQIRD--------LRMG-VEIVIATPGRLI- 336
Query: 225 EEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXX 284
+ + + V+ +V+DEA + + F P ++ + R L
Sbjct: 337 DMLEAQHTNLQRVTYLVLDEADRMLD--MGFEPQIRKIVNQIRPDR----QTLYWSATWP 390
Query: 285 XXXLDAIISALDIPRTNLIQKAQLRDNFHLS--VSMVKN--RMKDLLLLIKSSPFAEVQS 340
L P +I L+ N ++ V +V + + L+ L+K +
Sbjct: 391 KEVESLARQFLHNPYKVVIGSPYLKANQSINQVVEVVTDMEKYNRLIKLLKE--VMDGSR 448
Query: 341 IIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGM 400
I+I+ + + D ++R L + A S H ER +V F S + ++ AT
Sbjct: 449 ILIFTETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIMTATDVAAR 508
Query: 401 GLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFY 442
GLD +D+ V++Y P SLE+YV IGR GR G + F+
Sbjct: 509 GLDVKDIKCVVNYDFPSSLEDYVHRIGRTGRAGAKGTAYSFF 550
>Medtr1g095810.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:43124508-43126947 | 20130731
Length = 589
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 154/372 (41%), Gaps = 71/372 (19%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMILPGITLVVSPLV------ALIIDQLK 180
Q++ + ++L+G+ + I TG+GK+L + LP +++ ++ P+V LII +
Sbjct: 171 QVQGLPVILSGRDMIGIAFTGSGKTLVFVLPMIMMAMQEEIMMPIVPGEGPFGLIICPSR 230
Query: 181 QLPSCIRGALISSTQTLEEASETLVQLREGA-------------------------IKVL 215
+L + QT E E L+ L+E + ++
Sbjct: 231 EL----------ARQTYEVIEEFLLPLKEAGYPELRPLLCIGGIDMRSQLEIVKKGVHIV 280
Query: 216 FVSPERFLNEEFLSTISAGSAVSL-----VVIDEAHCISE--WSHNFRPSFMRLRASLLH 268
+P R L + A ++L + +DEA + + + + R F +A
Sbjct: 281 VATPGR------LKDMLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIREVFDHFKA---- 330
Query: 269 KRLNVGSVLAMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLLL 328
+R + M A++ + + N+ + + V VK K + L
Sbjct: 331 QRQTLLFSATMPTKIQNFARSALVKPIIV---NVGRAGAANLDVIQEVEYVKQEAKIVYL 387
Query: 329 L--IKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSS 386
L ++ +P ++I+C+ + + D I YL + A + H G +ER Y F +
Sbjct: 388 LECLQKTP----PPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEEREYAISSFKA 443
Query: 387 NKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYD--- 443
K V+VAT GLD D+ VI+Y +P +E YV IGR GR G+ F +
Sbjct: 444 GKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTFINKNQ 503
Query: 444 -DETYFKLRSLM 454
+ T L+ L+
Sbjct: 504 SETTLLDLKHLL 515
>Medtr6g033070.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:10401560-10398230 | 20130731
Length = 538
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 152/362 (41%), Gaps = 43/362 (11%)
Query: 112 KLLQLI--YGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMILPGITLVVS 169
KLLQ I GYE Q++AI L GK+ +++ TG+GKS + ++P I+ S
Sbjct: 149 KLLQNIEAAGYEMPTPVQMQAIPAALVGKNMLVLADTGSGKSASF-----LIPIISRCAS 203
Query: 170 PLVALIIDQLKQLPSCIRGALISSTQTLEEA--------------------SETLVQLRE 209
+ + D K L + S Q E A + L ++++
Sbjct: 204 HRLMYVSDNKKPLAMVLTPTRELSIQVEEHAKLLGKGLPFKTALVVGGDAMARQLYRIQQ 263
Query: 210 GAIKVLFVSPERFLNEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHK 269
G ++++ +P R ++ + I V+ V+DE C+ FR +++ +L
Sbjct: 264 G-VELIVGTPGRLVDLLTKNEIDLDD-VTTFVVDEVDCM--LQRGFRDQVLQIFTALSQP 319
Query: 270 RLNVGSVL---AMXXXXXXXXLDAIISALDIP-RTNLIQKAQLRDNFHLSVSMVKNRMKD 325
++ + S ++ D ++ + P R N K L++ + + K
Sbjct: 320 QVLMYSATTSDSLEKMANSMAKDTVVITVGEPNRPNKAVK-------QLAIWVESKQKKQ 372
Query: 326 LLLLIKSSPFAEVQSIIIYCKFQIETDTISRYLN-DNNILAKSYHSGITSKERSYVQELF 384
L I S ++IY ++ D ++ + + A S H + ER + + F
Sbjct: 373 KLFDILKSQKHFKPPVVIYVGSRLGADLLANAITVSTGVKAVSIHGEKSMTERREIMQSF 432
Query: 385 SSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDD 444
+ VVVAT G G+D V VI + +P S+ EYV +IGRA R G +F +D
Sbjct: 433 MVGEFPVVVATGVLGRGVDLLGVRQVIVFDMPNSINEYVHQIGRASRMGEEGQAIVFVND 492
Query: 445 ET 446
E
Sbjct: 493 EN 494
>Medtr5g027840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr5:11616617-11610718 | 20130731
Length = 523
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 150/351 (42%), Gaps = 29/351 (8%)
Query: 113 LLQLIYGYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMIL-------PGIT 165
+L+ G+E Q A +L G+ + I TG+GK+L + +PA++ G +
Sbjct: 114 VLECCKGFEKPSPIQSRAWPFLLDGRDLIGIAATGSGKTLAFGIPAIMHVMNKRKSKGSS 173
Query: 166 LVVSPLVALIIDQLKQLPSCIRGALISSTQTLEEASETL---------VQLREGAIKVLF 216
+PL L++ ++L I L + ++ S L + + I ++
Sbjct: 174 KGRNPL-CLMLSPTRELAQQISDVLCDAGKSCGVESVCLYGGTPKGAQISALKSGIDIVI 232
Query: 217 VSPERFLNEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSV 276
+P R + + I VS VV+DEA + + F ++ S+L + + +
Sbjct: 233 GTPGR-IQDLVEMGICRLQEVSFVVLDEADRMLDMG------FEQIVRSILGQTCSARQM 285
Query: 277 LAMXXXXXXXXLDAIISALDI-PRTNLIQKAQLRDNFHLS--VSMVKNRMKD--LLLLIK 331
+ +D P ++ L N + V ++ R++D LL L++
Sbjct: 286 VMFSATWPLAVHHLAQEFMDPNPVKVVVGSEDLSANHDVMQIVEVLDERLRDKRLLALLE 345
Query: 332 SSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRV 391
++ ++++ ++ ET + + L A S + ER+ LF + +
Sbjct: 346 KYHKSQKNRVLVFVLYKWETTRVEKMLQQGGWKAVSISGDKSQHERTKALSLFKNGSCPL 405
Query: 392 VVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFY 442
++AT GLD DV VI++S P +LE+YV IGR GR G+ H F+
Sbjct: 406 MIATDVAARGLDIPDVEVVINFSFPLTLEDYVHRIGRTGRAGKKGVAHTFF 456
>Medtr2g438110.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:15371233-15366440 | 20130731
Length = 406
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
+I+C + + D ++ + +NN + H + +ER + F + RV++ T + G
Sbjct: 276 VIFCNTKRKVDWLTEKMRNNNFTVSAMHGDMPQRERDAIMGEFRAGTTRVLITTDVWARG 335
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSL--MYSEGV 459
LD + V VI+Y LP + E Y+ IGR+GR GR F + LR + YS +
Sbjct: 336 LDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQI 395
Query: 460 DEYAVN 465
DE +N
Sbjct: 396 DEMPMN 401
>Medtr4g134170.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:56166694-56169176 | 20130731
Length = 706
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 160/374 (42%), Gaps = 48/374 (12%)
Query: 119 GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI----LPGIT--------- 165
GY+ Q+ AI + L + + + TG+GK+ + LP + LP I+
Sbjct: 305 GYKTPSPIQMAAIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPY 364
Query: 166 -LVVSP---LVALIIDQLKQLPS--CIRGALISSTQTLEEASETLVQLREGAIKVLFVSP 219
+V++P L I D+ + I+ I Q++EE ++R+G +++ +P
Sbjct: 365 AVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQG---FKIRQGC-EIVIATP 420
Query: 220 ERFLN--EEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVL 277
R ++ E + ++ + VV+DEA + + F P M + ++ L +
Sbjct: 421 GRLIDCLERRYAVLNQ---CNYVVLDEADRMIDMG--FEPQVMGVLDAMPSSNLKPENED 475
Query: 278 AMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLL-----LLIKS 332
+ SA P + + LR+ +++ + DL+ ++ +S
Sbjct: 476 EELDEKRIYRTTYMFSATMPPAVERLARKYLRNPVVVTIGTA-GKATDLISQHVIMMKES 534
Query: 333 SPFAEVQSI---------IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQEL 383
++Q + I++ + D +++ L+ + H G + +R E
Sbjct: 535 EKNYKLQRLLDELNDKTAIVFVNTKKSADFLAKNLDKEGYRVTTLHGGKSQDQREISLEG 594
Query: 384 FSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLF-- 441
F + + V+VAT G G+D DV VI+Y +P ++E Y IGR GR G+ F
Sbjct: 595 FRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 654
Query: 442 -YDDETYFKLRSLM 454
D + +++L+ ++
Sbjct: 655 LQDTDVFYELKQML 668
>Medtr1g026830.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr1:8797246-8799070 | 20130731
Length = 591
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 315 SVSMVKNRMKDLLLL--IKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGI 372
V VK K + LL ++ +P ++I+C+ + + D I YL + A + H
Sbjct: 376 EVEYVKQEAKIVYLLECLQKTP----PPVLIFCENKADVDNIHEYLLLKGVEAVAIHGDK 431
Query: 373 TSKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRD 432
++R Y F + K V+VAT GLD D+ VI+Y +P +E YV IGR GR
Sbjct: 432 DQEDREYAISSFKTGKKDVLVATDIASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRC 491
Query: 433 GRLSYCHLFYD----DETYFKLRSLM 454
G+ F + + T L+ L+
Sbjct: 492 GKTGIATTFINKNQTETTLLDLKHLL 517
>Medtr3g083690.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768711-37774877 | 20130731
Length = 613
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 320 KNRMKDLLLLIKSSPFAEVQSI-IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERS 378
++ + DLL +++ Q++ +++ + + D + +L NN A + H + +ER
Sbjct: 385 RSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQERE 444
Query: 379 YVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYC 438
F S ++VAT GLD V V+++ LP +++YV IGR GR G+
Sbjct: 445 AALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLA 504
Query: 439 HLFYDDETYFKLRSL 453
F+++ RSL
Sbjct: 505 TAFFNENNTSMARSL 519
>Medtr3g083690.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:37768655-37774862 | 20130731
Length = 613
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 320 KNRMKDLLLLIKSSPFAEVQSI-IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERS 378
++ + DLL +++ Q++ +++ + + D + +L NN A + H + +ER
Sbjct: 385 RSHLMDLLHAQRANGVQGKQALTLVFVETKKGADALEHWLCLNNFPATTIHGDRSQQERE 444
Query: 379 YVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYC 438
F S ++VAT GLD V V+++ LP +++YV IGR GR G+
Sbjct: 445 AALRSFKSGNTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKKGLA 504
Query: 439 HLFYDDETYFKLRSL 453
F+++ RSL
Sbjct: 505 TAFFNENNTSMARSL 519
>Medtr7g100820.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr7:40632868-40627375 | 20130731
Length = 619
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 6/137 (4%)
Query: 327 LLLIKSSPFAEV--QSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELF 384
LL I+ S FAE ++++ + + + L +NI HS ++ +ER + F
Sbjct: 360 LLAIRQS-FAESLNPPVLVFLQSKERAKELYGELAFDNIRVDVIHSDLSQEERENAVDNF 418
Query: 385 SSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDD 444
+ K V++AT G+D + + VI+Y P+S Y+ IGR+GR GR FY +
Sbjct: 419 RAGKTWVLIATDVVARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITFYTE 478
Query: 445 ETYFKLR---SLMYSEG 458
E LR +LM S G
Sbjct: 479 EDIPFLRNVSNLMASSG 495
>Medtr6g039840.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:14348854-14341230 | 20130731
Length = 684
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 140/346 (40%), Gaps = 41/346 (11%)
Query: 119 GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMIL-------PGITLVVSPL 171
G E E Q + VL GKS +L TG+GK+L Y LP + L G+ L
Sbjct: 128 GIEVPTEIQCIGVPAVLDGKSVVLGSHTGSGKTLAYLLPLVQLLRRDEQMNGLVLKPKRP 187
Query: 172 VALIIDQLKQLPSCI-------------RGALISSTQTLEEASETLVQLREGAIKVLFVS 218
A+++ ++L + R ++S L E+L I ++ +
Sbjct: 188 RAVVLCPTRELSEQVFRVAKAISHHARFRCTMVSGGGRLRPQEESLSN----PIDMVVGT 243
Query: 219 PERFLNEEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGS--- 275
P R L + G + VV+DEA + + F P + A L H+ S
Sbjct: 244 PGRILQHIEEGNMVYGD-IQYVVLDEADTM--FDRGFGPDIKKFLAPLKHRASKPDSLGF 300
Query: 276 ----VLAMXXXXXXXXLDAIISALDIPRTNLIQK--AQLRDNFHLSVSMVKNRMKDLLLL 329
V A +D + RT+ + K + R +F + +S +N++ LL +
Sbjct: 301 QTVLVTATMTKAVQNLVDEEFQGIVHLRTSSLHKKISNARHDF-IKLSGTENKLDSLLQV 359
Query: 330 IKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKI 389
++ S A+ ++++C + + +L +N I +YH + + +R F SN
Sbjct: 360 LEPS-LAKGNRVMVFCNTLNSSRAVDHFLEENQISTVNYHGEVPAAQRVENLNKFKSNND 418
Query: 390 R--VVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDG 433
+V T GLD DV VI + P + +Y+ GR R G
Sbjct: 419 DCPTLVCTDLAARGLD-LDVDHVIMFDFPLNSIDYLHRTGRTARMG 463
>Medtr6g005320.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 159/374 (42%), Gaps = 50/374 (13%)
Query: 119 GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI----LPGIT--------- 165
GY+ Q+ +I + L + + + TG+GK+ + LP + LP I+
Sbjct: 267 GYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPY 326
Query: 166 -LVVSP---LVALIIDQLKQLPS--CIRGALISSTQTLEEASETLVQLREGAIKVLFVSP 219
+V++P L I D+ + I+ I Q++EE ++R+G +++ +P
Sbjct: 327 AVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQG---FKIRQGC-EIVIATP 382
Query: 220 ERFLN--EEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVL 277
R ++ E + ++ + VV+DEA + + F P M + ++ L +
Sbjct: 383 GRLIDCLERRYAVLNQ---CNYVVLDEADRMIDMG--FEPQVMGVLDAMPSSNLKPENED 437
Query: 278 AMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLL----LLIKSS 333
+ SA P + + LR+ +++ + DL+ +++K S
Sbjct: 438 EELDEKRIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTA-GKATDLISQHVIMMKES 496
Query: 334 PFA----------EVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQEL 383
++ I++ + D +++ L + + H G + +R E
Sbjct: 497 EKNYNLHRLLDQLNDKTAIVFVNTKKSADFLAKNLEGYRVT--TLHGGKSQDQREISLEG 554
Query: 384 FSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLF-- 441
F + + V+VAT G G+D DV VI+Y +P ++E Y IGR GR G+ F
Sbjct: 555 FRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 614
Query: 442 -YDDETYFKLRSLM 454
D + +++L+ ++
Sbjct: 615 LQDTDVFYELKQML 628
>Medtr6g005320.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708901-704351 | 20130731
Length = 666
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 159/374 (42%), Gaps = 50/374 (13%)
Query: 119 GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI----LPGIT--------- 165
GY+ Q+ +I + L + + + TG+GK+ + LP + LP I+
Sbjct: 267 GYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPY 326
Query: 166 -LVVSP---LVALIIDQLKQLPS--CIRGALISSTQTLEEASETLVQLREGAIKVLFVSP 219
+V++P L I D+ + I+ I Q++EE ++R+G +++ +P
Sbjct: 327 AVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQG---FKIRQGC-EIVIATP 382
Query: 220 ERFLN--EEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVL 277
R ++ E + ++ + VV+DEA + + F P M + ++ L +
Sbjct: 383 GRLIDCLERRYAVLNQ---CNYVVLDEADRMIDMG--FEPQVMGVLDAMPSSNLKPENED 437
Query: 278 AMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLL----LLIKSS 333
+ SA P + + LR+ +++ + DL+ +++K S
Sbjct: 438 EELDEKRIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTA-GKATDLISQHVIMMKES 496
Query: 334 PFA----------EVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQEL 383
++ I++ + D +++ L + + H G + +R E
Sbjct: 497 EKNYNLHRLLDQLNDKTAIVFVNTKKSADFLAKNLEGYRVT--TLHGGKSQDQREISLEG 554
Query: 384 FSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLF-- 441
F + + V+VAT G G+D DV VI+Y +P ++E Y IGR GR G+ F
Sbjct: 555 FRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 614
Query: 442 -YDDETYFKLRSLM 454
D + +++L+ ++
Sbjct: 615 LQDTDVFYELKQML 628
>Medtr6g005320.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr6:708891-704351 | 20130731
Length = 666
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/374 (21%), Positives = 159/374 (42%), Gaps = 50/374 (13%)
Query: 119 GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMI----LPGIT--------- 165
GY+ Q+ +I + L + + + TG+GK+ + LP + LP I+
Sbjct: 267 GYKTPSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPMLSYITRLPPISEENEAEGPY 326
Query: 166 -LVVSP---LVALIIDQLKQLPS--CIRGALISSTQTLEEASETLVQLREGAIKVLFVSP 219
+V++P L I D+ + I+ I Q++EE ++R+G +++ +P
Sbjct: 327 AVVMAPTRELAQQIEDETVKFAQYMGIKVVSIVGGQSIEEQG---FKIRQGC-EIVIATP 382
Query: 220 ERFLN--EEFLSTISAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVL 277
R ++ E + ++ + VV+DEA + + F P M + ++ L +
Sbjct: 383 GRLIDCLERRYAVLNQ---CNYVVLDEADRMIDMG--FEPQVMGVLDAMPSSNLKPENED 437
Query: 278 AMXXXXXXXXLDAIISALDIPRTNLIQKAQLRDNFHLSVSMVKNRMKDLL----LLIKSS 333
+ SA P + + LR+ +++ + DL+ +++K S
Sbjct: 438 EELDEKRIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTA-GKATDLISQHVIMMKES 496
Query: 334 PFA----------EVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQEL 383
++ I++ + D +++ L + + H G + +R E
Sbjct: 497 EKNYNLHRLLDQLNDKTAIVFVNTKKSADFLAKNLEGYRVT--TLHGGKSQDQREISLEG 554
Query: 384 FSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLF-- 441
F + + V+VAT G G+D DV VI+Y +P ++E Y IGR GR G+ F
Sbjct: 555 FRTKRYNVLVATDVAGRGIDIPDVAHVINYDMPGNIEMYTHRIGRTGRAGKTGVATTFLT 614
Query: 442 -YDDETYFKLRSLM 454
D + +++L+ ++
Sbjct: 615 LQDTDVFYELKQML 628
>Medtr8g027775.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10113462-10118856 | 20130731
Length = 569
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/347 (21%), Positives = 143/347 (41%), Gaps = 42/347 (12%)
Query: 119 GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMIL--------------PGI 164
GYE Q + ++L GK + TG GK++ + LP++ + P +
Sbjct: 120 GYEKMTIVQEATLPVILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPNNRGQNQTPIL 179
Query: 165 TLVVSPLVALIIDQ-------LKQLPSCIRGALISSTQTLEEASETLVQLREGAIKVLFV 217
LVV P L LK P+ +I T E ++++ ++L
Sbjct: 180 VLVVCPTRELACQAAAEATKLLKYHPTIGAQVVIGGTSLSSEQK----RIQKNPCQILIA 235
Query: 218 SPERFLNEEFLSTISAGS---AVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVG 274
+P R L + +T S V +V+DEA + + FR ++ AS+ +R +
Sbjct: 236 TPGR-LKDHIANTAGFASKLMGVKALVLDEADQLLDMG--FRKDIEKIIASVPKQRQTL- 291
Query: 275 SVLAMXXXXXXXXLDAIISALDIPRTNLIQK------AQLRDNFHLSVSMVKNRMKDLLL 328
+ + + + D N +Q+ +Q+R HL ++ + L +
Sbjct: 292 -MFSATIPDAVHQVCNVALKKDFEFINTVQEGTEETHSQVR-QMHL-IAPLDKHFSLLSV 348
Query: 329 LIKSSPFAEVQ-SIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSN 387
++K +V ++++C + T ++ L N+ + HS R+ V + F +
Sbjct: 349 ILKEHIADDVDYKVLVFCTTAMVTSLVANLLGKLNLNVREIHSRKNQSYRTRVSDEFRKS 408
Query: 388 KIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
K ++V + G+D DV V+ LP ++Y+ +GR GR G+
Sbjct: 409 KRLILVTSDVSARGVDYPDVSLVVQVGLPADKQQYIHRLGRTGRKGK 455
>Medtr4g010565.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:2449773-2458512 | 20130731
Length = 504
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%)
Query: 337 EVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATV 396
+ ++I+ K +++ L + N + HSG++ +ER + F K R++VAT
Sbjct: 364 DFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLKRYKGFKEGKQRILVATD 423
Query: 397 AFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDG 433
G G+D V VI+Y +P+S + Y+ +GRAGR G
Sbjct: 424 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 460
>Medtr2g007000.4 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 144/352 (40%), Gaps = 57/352 (16%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAM----ILPGITLVVSPLVALIIDQLKQL 182
Q +A+ ++++G+ + + TG+GK+L + LP + P + + P + LI+ ++L
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGP-IGLIMAPTREL 588
Query: 183 PSCIRGALISSTQTL----------EEASETLVQLREGAIKVLFVSPERFLNEEFLSTIS 232
I + T+ + ++ + +L+ G +++ +P R ++ L T S
Sbjct: 589 VQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPGRMID--ILCTSS 645
Query: 233 AG----SAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXL 288
V+ +V+DEA + + F P R+ ++ R V
Sbjct: 646 GKITNLRRVTYLVMDEADRM--FDMGFEPQITRIVQNIRPDRQTV--------------- 688
Query: 289 DAIISALDIPRT-NLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSP------------- 334
+ SA PR ++ + L + V KD+ L++ P
Sbjct: 689 --LFSAT-FPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLG 745
Query: 335 -FAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVV 393
+ E I+++ Q + D + + L + S H +R F SN ++V
Sbjct: 746 EWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLV 805
Query: 394 ATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
AT GLD +++ VI++ +P E+YV +GR GR GR F +E
Sbjct: 806 ATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEE 857
>Medtr2g007000.8 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 144/352 (40%), Gaps = 57/352 (16%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAM----ILPGITLVVSPLVALIIDQLKQL 182
Q +A+ ++++G+ + + TG+GK+L + LP + P + + P + LI+ ++L
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGP-IGLIMAPTREL 588
Query: 183 PSCIRGALISSTQTL----------EEASETLVQLREGAIKVLFVSPERFLNEEFLSTIS 232
I + T+ + ++ + +L+ G +++ +P R ++ L T S
Sbjct: 589 VQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPGRMID--ILCTSS 645
Query: 233 AG----SAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXL 288
V+ +V+DEA + + F P R+ ++ R V
Sbjct: 646 GKITNLRRVTYLVMDEADRM--FDMGFEPQITRIVQNIRPDRQTV--------------- 688
Query: 289 DAIISALDIPRT-NLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSP------------- 334
+ SA PR ++ + L + V KD+ L++ P
Sbjct: 689 --LFSAT-FPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLG 745
Query: 335 -FAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVV 393
+ E I+++ Q + D + + L + S H +R F SN ++V
Sbjct: 746 EWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLV 805
Query: 394 ATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
AT GLD +++ VI++ +P E+YV +GR GR GR F +E
Sbjct: 806 ATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEE 857
>Medtr2g007000.6 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784007 | 20130731
Length = 1114
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 144/352 (40%), Gaps = 57/352 (16%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAM----ILPGITLVVSPLVALIIDQLKQL 182
Q +A+ ++++G+ + + TG+GK+L + LP + P + + P + LI+ ++L
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGP-IGLIMAPTREL 588
Query: 183 PSCIRGALISSTQTL----------EEASETLVQLREGAIKVLFVSPERFLNEEFLSTIS 232
I + T+ + ++ + +L+ G +++ +P R ++ L T S
Sbjct: 589 VQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPGRMID--ILCTSS 645
Query: 233 AG----SAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXL 288
V+ +V+DEA + + F P R+ ++ R V
Sbjct: 646 GKITNLRRVTYLVMDEADRM--FDMGFEPQITRIVQNIRPDRQTV--------------- 688
Query: 289 DAIISALDIPRT-NLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSP------------- 334
+ SA PR ++ + L + V KD+ L++ P
Sbjct: 689 --LFSAT-FPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLG 745
Query: 335 -FAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVV 393
+ E I+++ Q + D + + L + S H +R F SN ++V
Sbjct: 746 EWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLV 805
Query: 394 ATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
AT GLD +++ VI++ +P E+YV +GR GR GR F +E
Sbjct: 806 ATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEE 857
>Medtr2g007000.2 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 144/352 (40%), Gaps = 57/352 (16%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAM----ILPGITLVVSPLVALIIDQLKQL 182
Q +A+ ++++G+ + + TG+GK+L + LP + P + + P + LI+ ++L
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGP-IGLIMAPTREL 588
Query: 183 PSCIRGALISSTQTL----------EEASETLVQLREGAIKVLFVSPERFLNEEFLSTIS 232
I + T+ + ++ + +L+ G +++ +P R ++ L T S
Sbjct: 589 VQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPGRMID--ILCTSS 645
Query: 233 AG----SAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXL 288
V+ +V+DEA + + F P R+ ++ R V
Sbjct: 646 GKITNLRRVTYLVMDEADRM--FDMGFEPQITRIVQNIRPDRQTV--------------- 688
Query: 289 DAIISALDIPRT-NLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSP------------- 334
+ SA PR ++ + L + V KD+ L++ P
Sbjct: 689 --LFSAT-FPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLG 745
Query: 335 -FAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVV 393
+ E I+++ Q + D + + L + S H +R F SN ++V
Sbjct: 746 EWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLV 805
Query: 394 ATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
AT GLD +++ VI++ +P E+YV +GR GR GR F +E
Sbjct: 806 ATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEE 857
>Medtr2g007000.1 | DEAD-box RNA helicase family protein | HC |
chr2:778249-784007 | 20130731
Length = 1114
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 144/352 (40%), Gaps = 57/352 (16%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAM----ILPGITLVVSPLVALIIDQLKQL 182
Q +A+ ++++G+ + + TG+GK+L + LP + P + + P + LI+ ++L
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGP-IGLIMAPTREL 588
Query: 183 PSCIRGALISSTQTL----------EEASETLVQLREGAIKVLFVSPERFLNEEFLSTIS 232
I + T+ + ++ + +L+ G +++ +P R ++ L T S
Sbjct: 589 VQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPGRMID--ILCTSS 645
Query: 233 AG----SAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXL 288
V+ +V+DEA + + F P R+ ++ R V
Sbjct: 646 GKITNLRRVTYLVMDEADRM--FDMGFEPQITRIVQNIRPDRQTV--------------- 688
Query: 289 DAIISALDIPRT-NLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSP------------- 334
+ SA PR ++ + L + V KD+ L++ P
Sbjct: 689 --LFSAT-FPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLG 745
Query: 335 -FAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVV 393
+ E I+++ Q + D + + L + S H +R F SN ++V
Sbjct: 746 EWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLV 805
Query: 394 ATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
AT GLD +++ VI++ +P E+YV +GR GR GR F +E
Sbjct: 806 ATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEE 857
>Medtr2g007000.5 | DEAD-box RNA helicase family protein | HC |
chr2:778236-784023 | 20130731
Length = 1114
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 144/352 (40%), Gaps = 57/352 (16%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAM----ILPGITLVVSPLVALIIDQLKQL 182
Q +A+ ++++G+ + + TG+GK+L + LP + P + + P + LI+ ++L
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGP-IGLIMAPTREL 588
Query: 183 PSCIRGALISSTQTL----------EEASETLVQLREGAIKVLFVSPERFLNEEFLSTIS 232
I + T+ + ++ + +L+ G +++ +P R ++ L T S
Sbjct: 589 VQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPGRMID--ILCTSS 645
Query: 233 AG----SAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXL 288
V+ +V+DEA + + F P R+ ++ R V
Sbjct: 646 GKITNLRRVTYLVMDEADRM--FDMGFEPQITRIVQNIRPDRQTV--------------- 688
Query: 289 DAIISALDIPRT-NLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSP------------- 334
+ SA PR ++ + L + V KD+ L++ P
Sbjct: 689 --LFSAT-FPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLG 745
Query: 335 -FAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVV 393
+ E I+++ Q + D + + L + S H +R F SN ++V
Sbjct: 746 EWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLV 805
Query: 394 ATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
AT GLD +++ VI++ +P E+YV +GR GR GR F +E
Sbjct: 806 ATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEE 857
>Medtr2g007000.7 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 144/352 (40%), Gaps = 57/352 (16%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAM----ILPGITLVVSPLVALIIDQLKQL 182
Q +A+ ++++G+ + + TG+GK+L + LP + P + + P + LI+ ++L
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGP-IGLIMAPTREL 588
Query: 183 PSCIRGALISSTQTL----------EEASETLVQLREGAIKVLFVSPERFLNEEFLSTIS 232
I + T+ + ++ + +L+ G +++ +P R ++ L T S
Sbjct: 589 VQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPGRMID--ILCTSS 645
Query: 233 AG----SAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXL 288
V+ +V+DEA + + F P R+ ++ R V
Sbjct: 646 GKITNLRRVTYLVMDEADRM--FDMGFEPQITRIVQNIRPDRQTV--------------- 688
Query: 289 DAIISALDIPRT-NLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSP------------- 334
+ SA PR ++ + L + V KD+ L++ P
Sbjct: 689 --LFSAT-FPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLG 745
Query: 335 -FAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVV 393
+ E I+++ Q + D + + L + S H +R F SN ++V
Sbjct: 746 EWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLV 805
Query: 394 ATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
AT GLD +++ VI++ +P E+YV +GR GR GR F +E
Sbjct: 806 ATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEE 857
>Medtr2g007000.3 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784023 | 20130731
Length = 1114
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 144/352 (40%), Gaps = 57/352 (16%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAM----ILPGITLVVSPLVALIIDQLKQL 182
Q +A+ ++++G+ + + TG+GK+L + LP + P + + P + LI+ ++L
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGP-IGLIMAPTREL 588
Query: 183 PSCIRGALISSTQTL----------EEASETLVQLREGAIKVLFVSPERFLNEEFLSTIS 232
I + T+ + ++ + +L+ G +++ +P R ++ L T S
Sbjct: 589 VQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPGRMID--ILCTSS 645
Query: 233 AG----SAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXL 288
V+ +V+DEA + + F P R+ ++ R V
Sbjct: 646 GKITNLRRVTYLVMDEADRM--FDMGFEPQITRIVQNIRPDRQTV--------------- 688
Query: 289 DAIISALDIPRT-NLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSP------------- 334
+ SA PR ++ + L + V KD+ L++ P
Sbjct: 689 --LFSAT-FPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLG 745
Query: 335 -FAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVV 393
+ E I+++ Q + D + + L + S H +R F SN ++V
Sbjct: 746 EWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLV 805
Query: 394 ATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
AT GLD +++ VI++ +P E+YV +GR GR GR F +E
Sbjct: 806 ATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEE 857
>Medtr2g007000.9 | DEAD-box RNA helicase family protein | HC |
chr2:778196-784007 | 20130731
Length = 1114
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 144/352 (40%), Gaps = 57/352 (16%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAM----ILPGITLVVSPLVALIIDQLKQL 182
Q +A+ ++++G+ + + TG+GK+L + LP + P + + P + LI+ ++L
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGP-IGLIMAPTREL 588
Query: 183 PSCIRGALISSTQTL----------EEASETLVQLREGAIKVLFVSPERFLNEEFLSTIS 232
I + T+ + ++ + +L+ G +++ +P R ++ L T S
Sbjct: 589 VQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPGRMID--ILCTSS 645
Query: 233 AG----SAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXL 288
V+ +V+DEA + + F P R+ ++ R V
Sbjct: 646 GKITNLRRVTYLVMDEADRM--FDMGFEPQITRIVQNIRPDRQTV--------------- 688
Query: 289 DAIISALDIPRT-NLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSP------------- 334
+ SA PR ++ + L + V KD+ L++ P
Sbjct: 689 --LFSAT-FPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLG 745
Query: 335 -FAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVV 393
+ E I+++ Q + D + + L + S H +R F SN ++V
Sbjct: 746 EWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLV 805
Query: 394 ATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
AT GLD +++ VI++ +P E+YV +GR GR GR F +E
Sbjct: 806 ATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEE 857
>Medtr2g007000.10 | DEAD-box RNA helicase family protein | HC |
chr2:778234-784007 | 20130731
Length = 1114
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 144/352 (40%), Gaps = 57/352 (16%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAM----ILPGITLVVSPLVALIIDQLKQL 182
Q +A+ ++++G+ + + TG+GK+L + LP + P + + P + LI+ ++L
Sbjct: 530 QAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVVGDGP-IGLIMAPTREL 588
Query: 183 PSCIRGALISSTQTL----------EEASETLVQLREGAIKVLFVSPERFLNEEFLSTIS 232
I + T+ + ++ + +L+ G +++ +P R ++ L T S
Sbjct: 589 VQQIHSDIRKFTKVMGIRCVPVYGGSGVAQQISELKRG-TEIVVCTPGRMID--ILCTSS 645
Query: 233 AG----SAVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXL 288
V+ +V+DEA + + F P R+ ++ R V
Sbjct: 646 GKITNLRRVTYLVMDEADRM--FDMGFEPQITRIVQNIRPDRQTV--------------- 688
Query: 289 DAIISALDIPRT-NLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSP------------- 334
+ SA PR ++ + L + V KD+ L++ P
Sbjct: 689 --LFSAT-FPRQVEILARKVLNKPVEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLG 745
Query: 335 -FAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVV 393
+ E I+++ Q + D + + L + S H +R F SN ++V
Sbjct: 746 EWYEKGKILVFVHSQDKCDALFKDLMKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLV 805
Query: 394 ATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDE 445
AT GLD +++ VI++ +P E+YV +GR GR GR F +E
Sbjct: 806 ATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFISEE 857
>Medtr3g107420.2 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%)
Query: 337 EVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATV 396
+ ++I+ K + R L + N + HSG++ +ER F R++VAT
Sbjct: 287 DFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSGMSQEERLKRYRGFKEGHSRILVATD 346
Query: 397 AFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDG 433
G G+D V VI+Y +P+S + Y+ +GRAGR G
Sbjct: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
>Medtr3g107420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr3:49555719-49561649 | 20130731
Length = 427
Score = 58.5 bits (140), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%)
Query: 337 EVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATV 396
+ ++I+ K + R L + N + HSG++ +ER F R++VAT
Sbjct: 287 DFNQVVIFVKSVSRAAELDRLLIECNFPSICIHSGMSQEERLKRYRGFKEGHSRILVATD 346
Query: 397 AFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDG 433
G G+D V VI+Y +P+S + Y+ +GRAGR G
Sbjct: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
>Medtr1g054630.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:23756195-23750953 | 20130731
Length = 608
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 140/348 (40%), Gaps = 39/348 (11%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKS--LCYQLPAMIL-------PGITLVVSPLVALIID 177
Q AI + LAG+ M TG+GK+ C+ + + IL P + PL ALI+
Sbjct: 180 QRYAIPISLAGRDLMACAQTGSGKTAAFCFPIISGILTEQYAQRPRVARTAYPL-ALILS 238
Query: 178 QLKQLPSCIR----------GALISSTQTLEEASETLVQLREGAIKVLFVSPERFLNEEF 227
++L I G + ++ L +L G + +L +P R ++
Sbjct: 239 PTRELSCQIHDEAKKFSYQTGVKVVVAYGGAPITQQLRELERG-VDILVATPGRLVDLLE 297
Query: 228 LSTISAGSAVSLVVIDEAHCISEWSHNFRPSF------MRLRASLLHKRLNVGSVLAMXX 281
+ +S + + +DEA + + F P M + + + L +
Sbjct: 298 RARVSL-QMIRYLALDEADRMLDMG--FEPQIRKIVEQMDMPPPGMRQTLLFSATFPKEI 354
Query: 282 XXXXXXLDAIISALDIPR----TNLIQKAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAE 337
A L + R T+LI + R + L S ++ + DLL + +
Sbjct: 355 QRLASDFLASYIFLAVGRVGSSTDLIAQ---RVEYVLE-SDKRSHLMDLLHAQRENDVNG 410
Query: 338 VQSI-IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATV 396
Q + +++ + + D + L N A H T +ER F + ++VAT
Sbjct: 411 KQGLTLVFVETKKGADALEHCLCVNGFPATCIHGDRTQQEREQALRSFKTGNTPILVATD 470
Query: 397 AFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDD 444
GLD V V+++ LP +++YV IGR GR G++ F++D
Sbjct: 471 VAARGLDIPRVAHVVNFDLPNDIDDYVHRIGRTGRAGKMGLATAFFND 518
>Medtr1g012420.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr1:2463886-2455302 | 20130731
Length = 427
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%)
Query: 337 EVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATV 396
+ ++I+ K + + L + N + HSG++ +ER + F R++VAT
Sbjct: 287 DFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATD 346
Query: 397 AFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDG 433
G G+D V VI+Y +P+S + Y+ +GRAGR G
Sbjct: 347 LVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFG 383
>Medtr8g027770.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10111776-10105760 | 20130731
Length = 668
Score = 57.0 bits (136), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 146/351 (41%), Gaps = 50/351 (14%)
Query: 119 GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMILPGITLVVS--------- 169
GYE Q + ++L GK + TG GK++ + +LP I +VV
Sbjct: 219 GYEKMTVVQEATLPVILKGKDVLAKAKTGTGKTVAF-----LLPSIEVVVKSPPSDRDQR 273
Query: 170 --PLVALIIDQLKQLPSCIRGALISSTQTLEEASETLVQLREGAIK-------------- 213
P+ L+I ++L +C A +T+ L+ VQ+ G +
Sbjct: 274 RPPIFVLVICPTREL-AC--QAAAEATKLLKYHPTIGVQVVIGGTRLALEQKRMQANPCQ 330
Query: 214 VLFVSPERFLNEEFLSTISAGS---AVSLVVIDEAHCISEWSHNFRPSFMRLRASLLHKR 270
+L +P R L + +T S V +V+DEA + + FR ++ A++ +R
Sbjct: 331 ILVATPGR-LRDHIENTAGFASRLMGVKSLVLDEADHLLDM--GFRKDIEKIIAAIPKQR 387
Query: 271 LNVGSVLAMXXXXXXXXLDAIISALDIPRTNLIQK------AQLRDNFHLSVSMVKNRMK 324
+ + + + + D N +Q+ +Q+R HL V+ +
Sbjct: 388 QTL--MFSATIPDEVRQVCHVALKRDFEYINTVQEGSEDTHSQVR-QMHL-VAPLDKHFP 443
Query: 325 DLLLLIKSSPFAEVQ-SIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQEL 383
L ++K +V ++++C + T ++ L + N+ + HS R+ V +
Sbjct: 444 LLYAILKEHIADDVDYKVLVFCTTAMVTRLVADLLGELNLNVREIHSRKPQSYRTRVSDE 503
Query: 384 FSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
F +K ++V + G+D DV V+ LP ++Y+ +GR GR G+
Sbjct: 504 FRKSKGLILVTSDVSARGVDYPDVTLVVQVGLPADKQQYIHRLGRTGRKGK 554
>Medtr7g076820.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr7:28990557-28982494 | 20130731
Length = 523
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 169/406 (41%), Gaps = 33/406 (8%)
Query: 81 RGRCKTREIDCEAVEEAVSAARDEVSDENLVK--LLQLIY--GYECFREGQLEAIKMVLA 136
+ R K D E V+A + ++ +K LL IY G+E Q E+I + L
Sbjct: 126 KARLKIPAADTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALT 185
Query: 137 GKSTMLILPTGAGKSLCYQLPAM--------ILPGITLVVSPLVALIIDQL-KQLPSCIR 187
G + G GK+ + +PA+ ++ + LV + +AL Q+ K+L ++
Sbjct: 186 GSDILARAKNGTGKTAAFSIPALEKIDQDKNVIQVVILVPTRELALQTSQVCKELGKHLQ 245
Query: 188 GALISST--QTLEEASETLVQLREGAIKVLFVSPERFLNEEFLSTISAGSAVSLVVIDEA 245
++ +T +L++ L Q + +L +P R L+ + S++V+DEA
Sbjct: 246 IQVMVTTGGTSLKDDIMRLYQ----PVHLLVGTPGRILDLA-KKGVCVLKDCSMLVMDEA 300
Query: 246 HCISEWSHNFRPSFMRLRASLLHKRLNVGSVLAMXXXXXXXXLDAIISALDIPR-TNLIQ 304
+ S F+PS +L L R +L D L P NL+
Sbjct: 301 DKL--LSPEFKPSIEQLIQFLPSNR----QILLFSATFPVTVKDFNDRYLRKPYIINLMD 354
Query: 305 KAQLRDNFHLSVSMVKNRMKDLLLLIKSSPFAEVQ--SIIIYCKFQIETDTISRYLNDNN 362
+ L+ + V+ R K L ++ F+++Q II+C + +++ + +
Sbjct: 355 ELTLKGITQF-YAFVEERQKVHCL---NTLFSKLQINQSIIFCNSVNRVELLAKKITELG 410
Query: 363 ILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEY 422
H+ + R+ V F + R +V T F G+D + V VI++ P++ E Y
Sbjct: 411 YSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETY 470
Query: 423 VQEIGRAGRDGRLSYCHLFYDDETYFKLRSLMYSEGVDEYAVNKFL 468
+ +GR+GR G L E F L + G + + F+
Sbjct: 471 LHRVGRSGRFGHLGLAVNLVTYEDRFNLYRIEQELGTEIKQIPPFI 516
>Medtr5g090120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr5:39247084-39252313 | 20130731
Length = 590
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
I++ + + + D IS ++ +I ++ H I+ +R F + V+VAT G
Sbjct: 329 IVFTQTKRDADRISHGMS-KSIPCEALHGDISQIQRERTLAGFRNGHFNVLVATDVASRG 387
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSL 453
LD +V VIHY LP + E +V GR GR G+ L Y + LR++
Sbjct: 388 LDIPNVDLVIHYELPNNSEIFVHRSGRTGRAGKKGTAILVYTQDQSRTLRTI 439
>Medtr3g467550.3 | DEAD-box ATP-dependent RNA helicase | HC |
chr3:27857813-27867050 | 20130731
Length = 456
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 136/320 (42%), Gaps = 43/320 (13%)
Query: 127 QLEAIKMVLAGKSTMLILPTGAGKSLCYQLP----AMILPGITLVVSPLVALIIDQLKQL 182
Q +A+ + L+G+ + TG+GK+ + +P + P I PL AL++ ++L
Sbjct: 143 QAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQHCLAQPPIRRGDGPL-ALVLAPTREL 201
Query: 183 PSCIRGALISSTQTLEEASETLV-----------QLREGAIKVLFVSPERFLNEEFLSTI 231
I + + +++LE +V +LR G +++ +P RF++
Sbjct: 202 AQQIEKEVQAFSRSLESFKTAIVVGGTNIEKQRSELRAG-VEIAVATPGRFIDHLQQGNT 260
Query: 232 SAGSAVSLVVIDEAHCISEWSHNFRPSFMRLRASLL--HKRLNVGSVL-----AMXXXXX 284
S S +S VV+DEA + + F P + SL H+ L + + A+
Sbjct: 261 SL-SRISYVVLDEADRMLDM--GFEPQIREIMRSLPEKHQTLLFSATMPVEIEALSKEYL 317
Query: 285 XXXLDAIISALDIPRTNLIQK-AQLRDNFHLSVSMVKNRMKDLLLLIKSS------PFAE 337
+ + + P TN+ Q ++ +N + +R+ DLL+ S PF
Sbjct: 318 ASPVQVKVGKVSSPTTNVSQTLVKVSENEKI------DRLLDLLVEEASQAEKCGHPFPL 371
Query: 338 VQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVA 397
I++ + + D ++ L + A S H G + ER F S+ ++VAT
Sbjct: 372 T---IVFVERKTRCDEVAEALIAQGLSAVSLHGGRSQSEREAALHDFRSSSTSILVATDV 428
Query: 398 FGMGLDKRDVGAVIHYSLPE 417
GLD V VI+ LP+
Sbjct: 429 ASRGLDVTGVSHVINLDLPK 448
>Medtr2g099620.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 413
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
+I+ + + D ++ + + + H + R + F S RV++ T G
Sbjct: 283 VIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
+D + V VI+Y LP E Y+ IGR+GR GR
Sbjct: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGR 375
>Medtr2g039960.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:17536994-17532829 | 20130731
Length = 413
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
+I+ + + D ++ + + + H + R + F S RV++ T G
Sbjct: 283 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
+D + V VI+Y LP E Y+ IGR+GR GR
Sbjct: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGR 375
>Medtr2g099620.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr2:42715955-42719519 | 20130731
Length = 397
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
+I+ + + D ++ + + + H + R + F S RV++ T G
Sbjct: 267 VIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 326
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
+D + V VI+Y LP E Y+ IGR+GR GR
Sbjct: 327 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGR 359
>Medtr4g114120.1 | DEAD-box ATP-dependent RNA helicase-like protein
| HC | chr4:46980468-46984247 | 20130731
Length = 671
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 63/140 (45%)
Query: 315 SVSMVKNRMKDLLLLIKSSPFAEVQSIIIYCKFQIETDTISRYLNDNNILAKSYHSGITS 374
SV ++ R + + LL ++ ++ +++ + + D + +L N A + H
Sbjct: 378 SVQDMEKRTRLVDLLRRNVVNGKLALTLVFVETKKGADALENWLCRINFPAIAIHGDKVQ 437
Query: 375 KERSYVQELFSSNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
ER F ++VAT GLD V VI++ LP +++YV IGR GR G+
Sbjct: 438 MERERALRSFKRGLTPIMVATDVASRGLDIPHVAHVINFDLPRDIDDYVHRIGRTGRAGQ 497
Query: 435 LSYCHLFYDDETYFKLRSLM 454
F+ + +SL+
Sbjct: 498 SGLATAFFSTKNMPMAKSLV 517
>Medtr8g018400.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr8:6253262-6248871 | 20130731
Length = 413
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
+I+ + + D ++ + + + H + R + F S RV++ T G
Sbjct: 283 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
+D + V VI+Y LP E Y+ IGR+GR GR
Sbjct: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGR 375
>Medtr8g027780.1 | DEAD-box ATP-dependent RNA helicase family
protein | HC | chr8:10120030-10127066 | 20130731
Length = 573
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 145/349 (41%), Gaps = 46/349 (13%)
Query: 119 GYECFREGQLEAIKMVLAGKSTMLILPTGAGKSLCYQLPAMIL--------PG------I 164
GYE Q + ++L GK + TG GK++ + LP++ + PG +
Sbjct: 124 GYEKMTIVQEATLPVILEGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPSDPGQSQTPIL 183
Query: 165 TLVVSPL-------VALIIDQLKQLPSCIRGALISSTQTLEEASETLVQLREGAIKVLFV 217
LVV P A LK P+ +I T+ + E ++++ ++L
Sbjct: 184 VLVVCPTRELARQAAAEATKLLKYHPTIGAQVVIGGTKIVSEQK----RIQKNPCQILVA 239
Query: 218 SPERFLNEEFLSTISAGSAVSLV-----VIDEAHCISEWSHNFRPSFMRLRASLLHKRLN 272
+P R L + T AG A +L+ VIDEA + + FR + S+ +R
Sbjct: 240 TPGR-LKDHIAKT--AGFASNLMGLKTFVIDEADRLLDM--GFRKDIEEIITSVPKQRQT 294
Query: 273 VGSVLAMXXXXXXXXLDAIISALDIPRTNLIQK------AQLRDNFHLSVSMVKNRMKDL 326
+ + + + + D N +Q+ +Q+R HL ++ + L
Sbjct: 295 L--MFSATIPKAVHQVCNVALKKDYEFINTVQEGTEETHSQVR-QMHL-IAPLDKHFSLL 350
Query: 327 LLLIKSSPFAEVQ-SIIIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFS 385
+++K EV ++++C + T ++ L ++ + +S R+ V + F
Sbjct: 351 SVILKEHIADEVDYKVLVFCTTAMVTSLVASLLGKLDLNVREIYSRKKQGFRNRVSDEFR 410
Query: 386 SNKIRVVVATVAFGMGLDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGR 434
+K ++V + G+D DV V+ +P E Y+ +GR GR G+
Sbjct: 411 KSKRLILVTSDVSARGVDYPDVSLVVQLGIPADKELYIHRLGRTGRIGK 459
>Medtr4g125970.1 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52325320-52330070 | 20130731
Length = 413
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
+I+ + + D ++ + + + H + R + F S RV++ T G
Sbjct: 283 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSL--MYSEGV 459
+D + V VI++ LP E Y+ IGR+GR GR F E LR + Y+ V
Sbjct: 343 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKEDEGMLRDIQKFYNVLV 402
Query: 460 DEYAVN 465
+E N
Sbjct: 403 EELPSN 408
>Medtr4g125970.2 | DEAD-box ATP-dependent RNA helicase | HC |
chr4:52326072-52330070 | 20130731
Length = 430
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 342 IIYCKFQIETDTISRYLNDNNILAKSYHSGITSKERSYVQELFSSNKIRVVVATVAFGMG 401
+I+ + + D ++ + + + H + R + F S RV++ T G
Sbjct: 300 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 359
Query: 402 LDKRDVGAVIHYSLPESLEEYVQEIGRAGRDGRLSYCHLFYDDETYFKLRSL--MYSEGV 459
+D + V VI++ LP E Y+ IGR+GR GR F E LR + Y+ V
Sbjct: 360 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKEDEGMLRDIQKFYNVLV 419
Query: 460 DEYAVN 465
+E N
Sbjct: 420 EELPSN 425