Miyakogusa Predicted Gene

Lj4g3v2524950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2524950.1 Non Characterized Hit- tr|I1K3J4|I1K3J4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48694
PE,58.62,0.00000000006, ,CUFF.51083.1
         (57 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g080050.1 | multidrug resistance protein ABC transporter f...    66   7e-12

>Medtr8g080050.1 | multidrug resistance protein ABC transporter
           family protein | HC | chr8:34379065-34385478 | 20130731
          Length = 1446

 Score = 66.2 bits (160), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/58 (56%), Positives = 43/58 (74%), Gaps = 2/58 (3%)

Query: 1   MQQMAV-DEAVNQISPCQEDDSGGSRPGQKDQIEVVEENVPETIMDRKRTKEEEAMTG 57
           +QQMA  +E V QI PC++DDS   RP QK+  E+ EEN+ E ++D KRT+EEEAMTG
Sbjct: 807 VQQMAAHEETVCQI-PCRKDDSVCCRPCQKNPTEIAEENIQEIMLDWKRTREEEAMTG 863