Miyakogusa Predicted Gene

Lj4g3v2479510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2479510.1 tr|H0YDV4|H0YDV4_HUMAN Probable dolichyl
pyrophosphate Glc1Man9GlcNAc2
alpha-1,3-glucosyltransferase,32.84,7e-19,seg,NULL; Alg6_Alg8,Glycosyl
transferase, ALG6/ALG8; SUBFAMILY NOT NAMED,NULL; DOLICHYL
GLYCOSYLTRAN,CUFF.51066.1
         (211 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g077540.1 | dolichyl glycosyltransferase | HC | chr5:33095...   346   8e-96

>Medtr5g077540.1 | dolichyl glycosyltransferase | HC |
           chr5:33095794-33099923 | 20130731
          Length = 515

 Score =  346 bits (888), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 171/210 (81%), Positives = 179/210 (85%)

Query: 1   MTFIMVLLTLSPCLFKAWKNPQPKMICRWVAYAYTCGFLFGWHVHEKASLHFVIPLAIVA 60
           +TFIMVLL LSPCLFKAWKNPQP+ I RW++YAYTCGFLFGWHVHEKASLHFVIPLA VA
Sbjct: 305 VTFIMVLLALSPCLFKAWKNPQPQKITRWISYAYTCGFLFGWHVHEKASLHFVIPLAFVA 364

Query: 61  AQTLEDAKHYFLLSIVSCYSLFPLLFEAQEYPIKVXXXXXHSILMWSGFSAQFHDGIETR 120
           AQT EDAKHYFLLSIVSCYSLFPLLFEAQEYPIK+     HSILMWSGFSAQF+D  ET 
Sbjct: 365 AQTPEDAKHYFLLSIVSCYSLFPLLFEAQEYPIKILLLLLHSILMWSGFSAQFYDSAETG 424

Query: 121 ASNARPKKKVDQFGSKGSSGEPVKNEGFVISWIEMIYLVGLVVVEIWGQFLHPLLLGDKL 180
            S A  KKK  QF SKGS    V+N GFVI  IE IYLVGLVVVEIWGQ LHPLLLGDKL
Sbjct: 425 VSTAHTKKKAGQFESKGSLSADVRNNGFVIGLIEKIYLVGLVVVEIWGQVLHPLLLGDKL 484

Query: 181 AFAPLMLISIYCAFGIMYSWIWQLRSIVKS 210
           AF PLMLIS+YCA GIMYSWIWQLRSIVKS
Sbjct: 485 AFLPLMLISVYCALGIMYSWIWQLRSIVKS 514