Miyakogusa Predicted Gene

Lj4g3v2468440.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2468440.3 Non Characterized Hit- tr|F6HLT7|F6HLT7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,56.47,0,TCP,Transcription factor, TCP; seg,NULL; TCP,Transcription
factor TCP subgroup; R,CYC/TB1, R domain;,CUFF.51108.3
         (481 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g015010.1 | TCP family transcription factor | HC | chr7:45...   115   1e-25
Medtr6g015350.1 | TCP family transcription factor | HC | chr6:50...   108   9e-24
Medtr4g109660.1 | TCP family transcription factor | HC | chr4:45...   108   1e-23
Medtr4g079580.1 | TCP family transcription factor | HC | chr4:30...   108   2e-23
Medtr2g090960.2 | TCP family transcription factor | HC | chr2:39...   107   2e-23
Medtr2g090960.1 | TCP family transcription factor | HC | chr2:39...   107   2e-23
Medtr8g463380.1 | TCP family transcription factor | HC | chr8:22...   107   3e-23
Medtr3g026050.1 | TCP family transcription factor | HC | chr3:79...   103   5e-22
Medtr2g078200.1 | TCP family transcription factor | HC | chr2:32...    97   3e-20
Medtr1g103380.1 | TCP family transcription factor | HC | chr1:46...    77   3e-14
Medtr7g018500.1 | TCP family transcription factor | HC | chr7:60...    76   8e-14
Medtr6g017055.1 | TCP family transcription factor | HC | chr6:67...    75   1e-13
Medtr4g111935.1 | TCP family transcription factor | HC | chr4:46...    69   1e-11

>Medtr7g015010.1 | TCP family transcription factor | HC |
           chr7:4515349-4517203 | 20130731
          Length = 351

 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/73 (71%), Positives = 59/73 (80%)

Query: 60  RIIRVSRASGGKDRHSKVMTSKGSRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIK 119
           RI+RVSRA GGKDRHSKV T +G RDRRVRLSV TAIQ YDLQDRLG +QPSK V+WL+ 
Sbjct: 47  RIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKVVDWLLN 106

Query: 120 SAADAIAELPSLP 132
           +A   I +LP LP
Sbjct: 107 AAKQDIDQLPPLP 119


>Medtr6g015350.1 | TCP family transcription factor | HC |
           chr6:5010976-5013085 | 20130731
          Length = 333

 Score =  108 bits (271), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 51/72 (70%), Positives = 56/72 (77%)

Query: 60  RIIRVSRASGGKDRHSKVMTSKGSRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIK 119
           RI+RVSRA G KDRHSKV T KG RDRRVRLS+ TAI  YDLQDRLG +QPSK V+WL+ 
Sbjct: 39  RIVRVSRAFGTKDRHSKVYTIKGLRDRRVRLSIQTAIHLYDLQDRLGLNQPSKVVDWLLN 98

Query: 120 SAADAIAELPSL 131
            A D I ELP L
Sbjct: 99  IAKDEIDELPPL 110


>Medtr4g109660.1 | TCP family transcription factor | HC |
           chr4:45588798-45589718 | 20130731
          Length = 306

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 50/72 (69%), Positives = 57/72 (79%)

Query: 60  RIIRVSRASGGKDRHSKVMTSKGSRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIK 119
           RI+RVSR+ GGKDRHSKV T +G RDRR+RLSV TAIQ YDLQDRLG  QPSK VEWLI+
Sbjct: 46  RIVRVSRSLGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVEWLIE 105

Query: 120 SAADAIAELPSL 131
           +    I +LP L
Sbjct: 106 ATQSDIDKLPPL 117


>Medtr4g079580.1 | TCP family transcription factor | HC |
           chr4:30768533-30767465 | 20130731
          Length = 335

 Score =  108 bits (269), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 49/69 (71%), Positives = 57/69 (82%)

Query: 64  VSRASGGKDRHSKVMTSKGSRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSAAD 123
           + RA+G KDRHSKV TSKG RDRRVRLS  TAI+FYD+QDRLGYD+PSKAV+WLIK A  
Sbjct: 16  IVRATGKKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKS 75

Query: 124 AIAELPSLP 132
           +I +L  LP
Sbjct: 76  SIDKLAELP 84


>Medtr2g090960.2 | TCP family transcription factor | HC |
           chr2:39078457-39076249 | 20130731
          Length = 329

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 57/69 (82%)

Query: 64  VSRASGGKDRHSKVMTSKGSRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSAAD 123
           + RA+G KDRHSKV T+KG RDRRVRLS  TAIQFYD+QDRLGYD+PSKAV+WLIK A  
Sbjct: 18  IVRATGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKS 77

Query: 124 AIAELPSLP 132
           AI +L  LP
Sbjct: 78  AIDKLDQLP 86


>Medtr2g090960.1 | TCP family transcription factor | HC |
           chr2:39078457-39075847 | 20130731
          Length = 329

 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 57/69 (82%)

Query: 64  VSRASGGKDRHSKVMTSKGSRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSAAD 123
           + RA+G KDRHSKV T+KG RDRRVRLS  TAIQFYD+QDRLGYD+PSKAV+WLIK A  
Sbjct: 18  IVRATGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKS 77

Query: 124 AIAELPSLP 132
           AI +L  LP
Sbjct: 78  AIDKLDQLP 86


>Medtr8g463380.1 | TCP family transcription factor | HC |
           chr8:22326723-22329800 | 20130731
          Length = 433

 Score =  107 bits (267), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 50/69 (72%), Positives = 57/69 (82%)

Query: 64  VSRASGGKDRHSKVMTSKGSRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSAAD 123
           + R++G KDRHSKV T+KG RDRRVRLS  TAIQFYD+QDRLGYD+PSKAV+WLIK A  
Sbjct: 48  IVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKS 107

Query: 124 AIAELPSLP 132
           AI EL  LP
Sbjct: 108 AIDELAHLP 116


>Medtr3g026050.1 | TCP family transcription factor | HC |
           chr3:7969037-7970349 | 20130731
          Length = 385

 Score =  103 bits (256), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 46/72 (63%), Positives = 56/72 (77%)

Query: 60  RIIRVSRASGGKDRHSKVMTSKGSRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIK 119
           RI+RVSR  GGKDRHSKV T +G RDRR+RLSV TAIQ YDLQD+LG  QPSK ++WL++
Sbjct: 47  RIVRVSRTFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLGLGQPSKVIDWLLE 106

Query: 120 SAADAIAELPSL 131
           +    I +LP L
Sbjct: 107 ATKLDIDKLPPL 118


>Medtr2g078200.1 | TCP family transcription factor | HC |
           chr2:32505911-32507609 | 20130731
          Length = 294

 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 45/69 (65%), Positives = 55/69 (79%)

Query: 64  VSRASGGKDRHSKVMTSKGSRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSAAD 123
           + R+ G KDRHSKV T+KG RDRRVRLS  TAI+FYD+QDRLG+D+PSKA++WLI  A  
Sbjct: 14  IIRSRGRKDRHSKVCTAKGPRDRRVRLSAHTAIEFYDVQDRLGFDRPSKALDWLINKAKP 73

Query: 124 AIAELPSLP 132
           AI +L  LP
Sbjct: 74  AIDQLAHLP 82


>Medtr1g103380.1 | TCP family transcription factor | HC |
           chr1:46797920-46794627 | 20130731
          Length = 489

 Score = 77.4 bits (189), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 43/60 (71%)

Query: 69  GGKDRHSKVMTSKGSRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSAADAIAEL 128
           G KDRHSK+ TS+G RDRRVRLS   A +F+DLQD L +D+PS  +EWL   +  AI EL
Sbjct: 200 GKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSDTAIKEL 259


>Medtr7g018500.1 | TCP family transcription factor | HC |
           chr7:6031315-6033168 | 20130731
          Length = 374

 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 33/57 (57%), Positives = 43/57 (75%)

Query: 72  DRHSKVMTSKGSRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSAADAIAEL 128
           DRHSK+ TS+G RDRRVRLS+  A +F+DLQD LG+D+ S  +EWL   + +AI EL
Sbjct: 122 DRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKEAIEEL 178


>Medtr6g017055.1 | TCP family transcription factor | HC |
           chr6:6710788-6713192 | 20130731
          Length = 409

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/84 (42%), Positives = 50/84 (59%)

Query: 71  KDRHSKVMTSKGSRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSAADAIAELPS 130
           KDRHSK+ TS+G RDRRVRLS+  A +F+DLQD LG+D+ S  ++WL   +  AI +L  
Sbjct: 127 KDRHSKIYTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKDLTK 186

Query: 131 LPETPEQQSHERRGQGFDDSADAE 154
             +           + F  S+D E
Sbjct: 187 SKQRNNNSEVGGDAKSFTSSSDCE 210


>Medtr4g111935.1 | TCP family transcription factor | HC |
           chr4:46280786-46279251 | 20130731
          Length = 388

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 44/63 (69%)

Query: 66  RASGGKDRHSKVMTSKGSRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSAADAI 125
           + S  +DRHSK+ T+KG RDRR+RLS+  A +F+ LQD LG+++ SK V+WL+  +   I
Sbjct: 128 KRSSKRDRHSKIKTAKGLRDRRMRLSLEVAKRFFGLQDMLGFEKASKTVDWLLNQSKLEI 187

Query: 126 AEL 128
             L
Sbjct: 188 KLL 190