Miyakogusa Predicted Gene

Lj4g3v2435010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2435010.1 Non Characterized Hit- tr|I1K3E4|I1K3E4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,88.46,8e-19,DUF3317,Small subunit of serine
palmitoyltransferase-like,CUFF.51018.1
         (57 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g024350.1 | DUF3317 family protein | HC | chr7:7996153-799...    65   2e-11

>Medtr7g024350.1 | DUF3317 family protein | HC |
          chr7:7996153-7999666 | 20130731
          Length = 76

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 28/43 (65%), Positives = 35/43 (81%), Gaps = 5/43 (11%)

Query: 1  MNWVQRKIHLYNVTFGLYMLDWWERCTFNVVVIVLMWFVLRYI 43
          MNWVQRK+HLYNVTFGL+MLDWWERC+F++     ++F   YI
Sbjct: 1  MNWVQRKVHLYNVTFGLFMLDWWERCSFSI-----LYFTFSYI 38