Miyakogusa Predicted Gene

Lj4g3v2434830.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2434830.1 Non Characterized Hit- tr|I1KRS8|I1KRS8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,80,0,CLATHRIN
ASSEMBLY PROTEIN,NULL; GAT-like domain,NULL; ANTH,ANTH; seg,NULL; no
description,Clathrin a,CUFF.51046.1
         (319 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g115420.1 | clathrin assembly plant-like protein, putative...   128   9e-30
Medtr0530s0020.1 | clathrin assembly protein | HC | scaffold0530...   101   8e-22
Medtr4g127440.1 | clathrin assembly plant-like protein | HC | ch...    80   2e-15
Medtr2g037980.1 | clathrin assembly plant-like protein | HC | ch...    78   1e-14
Medtr4g114960.1 | clathrin assembly plant-like protein, putative...    61   1e-09

>Medtr4g115420.1 | clathrin assembly plant-like protein, putative |
           HC | chr4:47678478-47672469 | 20130731
          Length = 545

 Score =  128 bits (321), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 117/216 (54%), Gaps = 15/216 (6%)

Query: 1   MPRHEAIKALEAYKRAGQQALNLSDFYEVCKGLELARNFQFPVLREPPQSFLTTMEEYIK 60
           M R +A+KAL+ Y+R G QA  LS+FYE+C+ L++ R  +F  + +PP SF+  ME+Y+K
Sbjct: 240 MQREDALKALDIYRRVGLQAERLSEFYEICRNLDIGRGEKFIKVEQPPSSFMQAMEDYVK 299

Query: 61  EAPRVVTVPSEPML-QLTYRPDEVLAIEDTKSPEEEETSVPIDXXXXXXXXXXXXXXXXX 119
           +AP+   V  +  +      P EVLAIE  K PE +E   P                   
Sbjct: 300 DAPQGAIVRKDQAVDNKIAAPKEVLAIEYNKEPEVKEERAPSPPPPSEPVKVETPPVQPP 359

Query: 120 XXXXXFDTGDLLGLNDIAPNASAIEESNALALAIVPTENGTASTFNSGAAQTKDFDPTGW 179
                    DLL + D  P A+ +EE NALALAIVP +   ++  N            GW
Sbjct: 360 P--------DLLNMEDPVPAAAELEEKNALALAIVPADQQPSAVSNHANGTA------GW 405

Query: 180 ELALVSTPSTDISSVNERQLAGGLDSLTLNSLYDEG 215
           ELALV+ PS++ S+    +LAGGLD LTL+SLYD+ 
Sbjct: 406 ELALVTAPSSNESAAAASKLAGGLDMLTLDSLYDDA 441


>Medtr0530s0020.1 | clathrin assembly protein | HC |
           scaffold0530:8161-4528 | 20130731
          Length = 532

 Score =  101 bits (252), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 128/259 (49%), Gaps = 51/259 (19%)

Query: 1   MPRHEAIKALEAYKRAGQQALNLSDFYEVCKGLELARNFQFPVLREPPQSFLTTMEEYIK 60
           M R +A+ AL+ Y+++G QA  LS F+E C+ L+  R  +F  +++PP SF+TTMEEYIK
Sbjct: 224 MNRDDAVSALKIYRKSGSQAERLSQFFETCRALDFGRGHKFINIKQPPASFMTTMEEYIK 283

Query: 61  EAPRVVTVPSEPMLQ---LTYRPD-----EVLAIEDTK-SPEEEETSVPIDXXXXXXXXX 111
           EAP  + +  E   +    T + D     ++L+++++  SP++ E +VP           
Sbjct: 284 EAPNTLMLEYEVNGKEEGSTGKEDGTCVGDLLSVDESDPSPDKNEATVPT---------- 333

Query: 112 XXXXXXXXXXXXXFDTGDLLGLNDIAPNASAIEESNALALAIVPTENGTASTFNSGAAQT 171
                            DL+GL D+   AS  +E N +ALAIV TEN    + NS   + 
Sbjct: 334 --------------QAADLMGLYDLLTGASEFDE-NPVALAIVSTEN----SLNSNNDEN 374

Query: 172 KDFDPTGWELALVSTPSTDISSVNERQLAG-------GLDSLTLNSLYDE---GAYKAAR 221
           +    TGWE+AL +    ++ +V E +  G        +D L L  LY+E   G      
Sbjct: 375 EASPITGWEVALFT--EQNMVAVAENKELGLQNKQDDEVDMLKLEGLYNEANAGVQHDGG 432

Query: 222 QPVDGVPSAPNPFE-VQDP 239
             +  V S P  F+ + DP
Sbjct: 433 YQIGQVNSNPFDFQTIHDP 451


>Medtr4g127440.1 | clathrin assembly plant-like protein | HC |
           chr4:52898132-52902112 | 20130731
          Length = 579

 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/120 (42%), Positives = 66/120 (55%), Gaps = 12/120 (10%)

Query: 129 DLLGLNDIAPNASAIEESNALALAIVPTENGTASTFNSGAAQTKDFDPTGWELALVSTPS 188
           D LGLN+I P A  +E+SNALALAI+P +   ++      A T     TGWELALV+TPS
Sbjct: 378 DFLGLNEINPKAQELEDSNALALAIIPPDGNNSNNL----ALTNITGTTGWELALVTTPS 433

Query: 189 TDISSVNERQLAGGLDSLTLNSLY-DEGAYKAARQPVDGV----PSAPNPFEV---QDPF 240
                 +++ +AGG D L LNSLY DE A +  +    G      +  NPF      DPF
Sbjct: 434 NHTCQASDQNMAGGFDKLLLNSLYEDENARRQLQLQNAGYGYGGAATHNPFNSYNQHDPF 493


>Medtr2g037980.1 | clathrin assembly plant-like protein | HC |
           chr2:16484005-16479782 | 20130731
          Length = 592

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/114 (44%), Positives = 65/114 (57%), Gaps = 4/114 (3%)

Query: 127 TGDLLGLNDIAPNASAIEESNALALAIVPTENGTASTFNSGAAQTKDFDPTGWELALVST 186
           T DLLGLN+I P A  +EESNALALAIVP   G  ++ N   +       TGWELALV+T
Sbjct: 382 TDDLLGLNEINPKAVELEESNALALAIVPP-GGNNNSNNLALSNIGG--TTGWELALVTT 438

Query: 187 PSTDISSVNERQLAGGLDSLTLNSLYDEGAYKAARQPVDGVPSAPNPFEVQDPF 240
           PS   S   +R +AGG D L L+SLY++   +   Q +           VQ+PF
Sbjct: 439 PSNHTSQAPDRAMAGGFDKLLLDSLYEDEHARRQLQ-LQNAGYGHEEMTVQNPF 491


>Medtr4g114960.1 | clathrin assembly plant-like protein, putative |
           HC | chr4:47396184-47393729 | 20130731
          Length = 601

 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 104/257 (40%), Gaps = 72/257 (28%)

Query: 1   MPRHEAIKALEAYKRAGQQALNLSDFYEVCKGLELARNFQFPVLREPPQSFLTTMEEYIK 60
           M     ++A E Y  A +    L+ FY  CK   +AR+ ++P +++   S L T+E ++K
Sbjct: 254 MEYAHCVQAFEFYVSASKMMDELAGFYGWCKDTGIARSSEYPEVQKITDSLLGTLEGFLK 313

Query: 61  E---------------------------APRVVTVPSEPMLQLTYRPDEV-LAIEDTKSP 92
           E                           A  V  +P+  +  LT RP +  +A++  ++P
Sbjct: 314 EMSDRTKSPEKKLEVKVITLKEQEPEAYANEVKALPAPEVKNLTPRPQQPPVALQPKETP 373

Query: 93  EEEETSVPIDXXXXXXXXXXXXXXXXXXXXXXFDTGDLLGLNDIAPNASAIEESNALALA 152
             ++                             +TG+L+ L +     SA E+ N  ALA
Sbjct: 374 RVQQ-----------------------------ETGELVNLRE--DGVSADEQGNKFALA 402

Query: 153 I------VPTEN-----GTASTFNSGAAQTKDFDPTGWELALVSTPSTDISSVNERQLAG 201
           +      V TE      G++   ++      +     WELALV T S    S  +  L G
Sbjct: 403 LFSGASTVKTEGLWEEFGSSKVTSAWETPAAEIGKADWELALVETSSN--LSKQKADLGG 460

Query: 202 GLDSLTLNSLYDEGAYK 218
           G DSL LN +YD+GA +
Sbjct: 461 GFDSLILNGMYDQGAVR 477