Miyakogusa Predicted Gene

Lj4g3v2409500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2409500.1 Non Characterized Hit- tr|I1K3D1|I1K3D1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.50115
PE,81.01,0,SUBFAMILY NOT NAMED,NULL; VERNALIZATION-INSENSITIVE PROTEIN
3,NULL; DUF1423,Protein of unknown funct,CUFF.51115.1
         (804 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g039650.1 | oberon-like protein | HC | chr4:14080849-14086...   373   e-103
Medtr5g097360.1 | potyviral VPg interacting protein | HC | chr5:...   297   2e-80
Medtr3g045740.1 | DUF1423 family protein | LC | chr3:14990534-14...    87   7e-17

>Medtr4g039650.1 | oberon-like protein | HC | chr4:14080849-14086502 |
            20130731
          Length = 1236

 Score =  373 bits (957), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 287/473 (60%), Gaps = 34/473 (7%)

Query: 340  IVREIVSESIPVMALTIPELTDDVIASTKEYLKNLIEKPEKKDELVSLQNRLERRSDLTK 399
            I+  I+SES+PVM+    E++   +   KE ++ L+   +   ++++ Q  L+ RSD+T 
Sbjct: 781  IIARIISESVPVMSRKFHEMSGQYMTHMKEGIRELMLNADSHGQILAFQKILQNRSDITL 840

Query: 400  ETLTKCSKLQLEILVTVKMGLTSFL--SGKVHLSEMVEIFLYRRCRNVTCKHLLPVDDCD 457
            + L KC ++QLEILV +K GL  +L     +  +++ ++FL  +CRNV+C+  LPVD+CD
Sbjct: 841  DVLVKCHRVQLEILVAIKTGLAHYLHLGDNISSNDLAQVFLNLKCRNVSCRSQLPVDECD 900

Query: 458  CKICSGNKGFCSSCMCPVCLNFDCASNTCSWIGCDVCSHWCHAACGIQRNLIKPGPSLKG 517
            CK+C    GFC  CMC VC  FD ASNT SW+GCDVC HWCH  CG++ + I+ G S  G
Sbjct: 901  CKLCVQKNGFCRECMCLVCSKFDNASNTVSWVGCDVCLHWCHTDCGLRESYIRNGNSTTG 960

Query: 518  PSGTTEMQFHCIGCGHASEMFGFVKDVFLCCAKDWGLETLMKEFDYVRRIFRGSEDRKGK 577
              GTTEMQFHCI C H SEMFGFVK+VF   AK+W  E L KE +YV+RIF  S+D +G+
Sbjct: 961  TKGTTEMQFHCIACDHPSEMFGFVKEVFQNFAKEWSAEYLYKELEYVKRIFSASKDIRGR 1020

Query: 578  ELHYKTDDMLLKLQTKMVSPSDASNYIIQFFSYADSMPNFPASGISSKDLTASQANLPKD 637
            +LH   D ML +L  K   P +    I+ F S  DS      +  S K+           
Sbjct: 1021 QLHEIADQMLPRLTIKSNLP-EVLRRIMSFLSDCDSSKLAMTTNFSGKE----------- 1068

Query: 638  TPSLSKSNSLVPSYAYDLSYSRS-HSD---------AVTNDLHQKDLKASLLSEAKSDAD 687
                 K NS+V   + + ++ +S +SD         ++     Q D K +++ E      
Sbjct: 1069 ---QGKENSVVAGPSQEAAWLKSIYSDKAPLLERPASILPRFDQND-KRTMVQE------ 1118

Query: 688  IQLAALLRRGGVENLESIVRIKEAEAKMFQTKADEARREAEGFQKMIRTKTAQMEDEYAA 747
            +QL+++ +  G + L+SI++IK AEAKMFQT+AD+ARREAEG +++   K  ++E+EY  
Sbjct: 1119 LQLSSVQKDFGFDELDSIIKIKHAEAKMFQTRADDARREAEGLKRIALAKNEKIEEEYVN 1178

Query: 748  KLGKLCLHDTEETQRKKLDEVKVLESSYVDYYKMKKRMQDEIDGLLQRMEATK 800
            ++ KL   +T+E +++KL+E+  LE ++ +Y  MK RM+ EI  LL +MEATK
Sbjct: 1179 RITKLRFTETDEMRKRKLEELHGLERAHREYLNMKMRMESEIKDLLSKMEATK 1231



 Score = 56.2 bits (134), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 25/169 (14%)

Query: 89  SLLNSLTHKGKEVVVS-EVAN--QDGKWVERDFLSLS----ETREDSSKRSLE------- 134
           S++N++  KGK + V+ +VA+  +DG W++R    L+    +  E  S+R  E       
Sbjct: 473 SVINNVKDKGKSISVTPDVAHSSKDGLWIDRGSNDLATCPVDDMEGPSRRGFELFSTSPV 532

Query: 135 -----EDDVERGSNREKKPKMETLNLSLALPDVSLSLTASNALQNIDXXXXXXXPVRTVP 189
                 D +      +    M  L+LSL+LP+V L + A                V+++ 
Sbjct: 533 RKAEKSDSLVLKKENDDSLAMGQLDLSLSLPNVLLPIGAQETATQAPGSPSQARSVQSLS 592

Query: 190 NRPSTTHTSYSNDYTAASLSYSYSHQFSHNPSCSLTRNSTENFEYSMSK 238
           N    T  + S+ +TA S+S+S S    HNPSCSLT+NS  ++E S+ K
Sbjct: 593 N----TFCTNSDGFTA-SMSFSGSQSLYHNPSCSLTKNSV-DYEQSVGK 635


>Medtr5g097360.1 | potyviral VPg interacting protein | HC |
           chr5:42645832-42649703 | 20130731
          Length = 565

 Score =  297 bits (761), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 164/460 (35%), Positives = 253/460 (55%), Gaps = 19/460 (4%)

Query: 327 DGGKMRKISRPERI-VREIVSESIPVMALTIPELTDDVIASTKEYLKNLIEKP---EKKD 382
           D   +R++S  +RI +++I  E + V+   +  L  + +   K  L+ ++E     + +D
Sbjct: 74  DQSVIRRVSSADRISLQDIARERVDVIHEKMLRLPGEFLEELKTGLRVILEGGNGMQHRD 133

Query: 383 ELVSLQNRLERRSDLTKETLTKCSKLQLEILVTVKMGLTSFLSGKVHLSE--MVEIFLYR 440
           E   LQ  ++ RSDLT +TL +  ++QLEILV +  G+  FL   + LS+  ++EIFLY+
Sbjct: 134 EFFILQKLVQSRSDLTAKTLIRAHRVQLEILVAINTGIQGFLHPNISLSQPSLIEIFLYK 193

Query: 441 RCRNVTCKHLLPVDDCDCKICSGNKGFCSSCMCPVCLNFDCASNTCSWIGCDVCSHWCHA 500
           RCRN+ C++ LP DDC C+ C+ N GFC+ CMC +C  FD   NTC WIGCD+CSHW H 
Sbjct: 194 RCRNIACQNQLPADDCSCETCTNNSGFCNLCMCTICSKFDFEVNTCRWIGCDLCSHWTHT 253

Query: 501 ACGIQRNLIKPGPSLKGPSGTTEMQFHCIGCGHASEMFGFVKDVFLCCAKDWGLETLMKE 560
            C I+  LI  GP +K  SG +EM F C  C   SE+ G+VKDVF  CA  W  ++LM+E
Sbjct: 254 DCAIREQLICMGPPVKSGSGPSEMVFRCQSCSRTSELLGWVKDVFQHCAPSWDGDSLMRE 313

Query: 561 FDYVRRIFRGSEDRKGKELHYKTDDMLLKLQTKMVSPSDASNYIIQFFSYADSMPNFPAS 620
            D+V RIF GS+D +G  L +K DD+  KL+++ +    A   I+  F   D        
Sbjct: 314 LDFVSRIFHGSKDHRGMNLFWKCDDLKEKLKSRKMEAKAACRAILTVFQELDLDSPKSLE 373

Query: 621 GISSKDLTASQANLPKDT----PSLSKSNSLVPSYAYDLSYSRSHSDAVTNDLHQKDLKA 676
            + S  L A Q    +       ++ K   +          +R   +A   +L  K    
Sbjct: 374 NVESGRLIAPQEACNRIAEVVQEAIRKMEFVADEKMRMFKKARLALEACDRELADK---- 429

Query: 677 SLLSEAKSDADIQLAALLRRGGVENLESIVRIKEAEAKMFQTKADEARREAEGFQKMIRT 736
                A+   ++++    ++  +E LE IVR+K AEA MFQ KA+EA+REAE  Q++   
Sbjct: 430 -----AREAEELKMERQKKKSQIEELERIVRLKNAEADMFQLKANEAKREAERLQRIALA 484

Query: 737 KTAQMEDEYAAKLGKLCLHDTEETQRKKLDEVKVLESSYV 776
           K+ + E+EY +   K  L + E  ++   +++K+ ESS +
Sbjct: 485 KSDKSEEEYTSNYLKQKLSEAEAEKQYLYEKIKLQESSRL 524


>Medtr3g045740.1 | DUF1423 family protein | LC |
           chr3:14990534-14992667 | 20130731
          Length = 170

 Score = 87.0 bits (214), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 48/84 (57%), Positives = 64/84 (76%), Gaps = 2/84 (2%)

Query: 351 VMALTIPELTDDVIASTKEYLKNLIEKPEKKDELVSLQNRLERRSDLTKETLTKCSKLQL 410
           V+   + E+  +V+AS K+YLKN+IE   KK+ELV+LQNRL+RRSDL+KETL K +K+QL
Sbjct: 58  VLNHIVREIVKEVVASIKKYLKNMIE--NKKEELVNLQNRLKRRSDLSKETLYKGNKVQL 115

Query: 411 EILVTVKMGLTSFLSGKVHLSEMV 434
           E LV V M L+SFL G + LS+ V
Sbjct: 116 ENLVAVNMKLSSFLYGNLQLSKNV 139