Miyakogusa Predicted Gene

Lj4g3v2401060.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2401060.1 Non Characterized Hit- tr|G7K9J9|G7K9J9_MEDTR
Uncharacterized protein OS=Medicago truncatula
GN=MTR_,40.24,0.000000004,seg,NULL,CUFF.50963.1
         (162 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g027940.1 | hypothetical protein | HC | chr5:11666453-1166...    67   7e-12

>Medtr5g027940.1 | hypothetical protein | HC |
           chr5:11666453-11669433 | 20130731
          Length = 149

 Score = 67.0 bits (162), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 54/82 (65%), Gaps = 4/82 (4%)

Query: 41  GVDKNTDFFPVEHPLEPPDEDRPVKCPMPESSVISDERMHERRFAENLRKRGEISEGMAE 100
           G++   +F PVEHP+EP D DRP++CP+PE S+++D R+ + R +  +R+RG++   M E
Sbjct: 49  GIEVAVEFKPVEHPVEPLDNDRPIQCPLPEPSILNDGRIWKERASATVRRRGDLPV-MKE 107

Query: 101 GERTDGIDNQPPARGVRKRHHN 122
           G     I+++ PA   R+ H N
Sbjct: 108 G---GAIESEGPAPRPRRSHSN 126