Miyakogusa Predicted Gene
- Lj4g3v2401050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2401050.1 CUFF.50962.1
(392 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g033880.1 | ENTH/ANTH/VHS superfamily protein | LC | chr1:... 397 e-110
Medtr4g114960.1 | clathrin assembly plant-like protein, putative... 113 4e-25
Medtr3g080490.1 | clathrin assembly protein | LC | chr3:36416634... 109 5e-24
Medtr8g106040.1 | ENTH/ANTH/VHS superfamily protein | HC | chr8:... 99 7e-21
Medtr3g106900.2 | clathrin assembly plant-like protein, putative... 95 1e-19
Medtr3g106900.1 | clathrin assembly plant-like protein, putative... 95 1e-19
Medtr2g008170.1 | clathrin assembly plant-like protein, putative... 87 2e-17
Medtr2g037980.1 | clathrin assembly plant-like protein | HC | ch... 87 4e-17
Medtr4g127440.1 | clathrin assembly plant-like protein | HC | ch... 87 4e-17
Medtr8g008860.1 | clathrin assembly plant-like protein | HC | ch... 86 8e-17
Medtr4g115420.1 | clathrin assembly plant-like protein, putative... 75 8e-14
Medtr0530s0020.1 | clathrin assembly protein | HC | scaffold0530... 62 1e-09
>Medtr1g033880.1 | ENTH/ANTH/VHS superfamily protein | LC |
chr1:12251038-12249896 | 20130731
Length = 380
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 222/398 (55%), Positives = 276/398 (69%), Gaps = 27/398 (6%)
Query: 1 MRVWKKATGALKDKNSIWVAKFSRKGPFRNPDLETVIIKATSHDEHSIDCKNVQRAFKWL 60
MR+WK+A+G LKD+ IWVAK S GP RNPDLET+IIKATSHDE +D KNVQR F+WL
Sbjct: 4 MRLWKRASGVLKDRYRIWVAKVSPYGPCRNPDLETLIIKATSHDEQCMDYKNVQRVFQWL 63
Query: 61 HTSPLYLKPLVWALSIRMQKTKSWVVALKGLMLIHGVFCCDLPVVQRMGRLPFDFSNFSD 120
TSPLYLKPL+ LS+R+Q+T+SWVVALKGLML HGV+ DLP+VQ MGRLPFD S+FSD
Sbjct: 64 RTSPLYLKPLLCGLSMRIQRTRSWVVALKGLMLTHGVYSFDLPMVQSMGRLPFDLSHFSD 123
Query: 121 AHLAPAKAWGFNAFVRAYFAYLDQRSAFVSSEVKKQKNKEGE--VEGTLMXXXXXXXXXX 178
HL+P K W FNAFVR+YFAYLDQRS + E K +NK+G+ E L+
Sbjct: 124 GHLSPEKGWVFNAFVRSYFAYLDQRSVILREEANKLQNKKGKESEEIPLIEELKNLEELQ 183
Query: 179 AMIDMLLQIKPRN-TDMNVGLVLEAMDCVIVEVFDVYSKFCKKIATVLLRIYDVGGKLEA 237
+IDMLLQIKP++ M + L+LEAMDCV+ E+ +VY KF K+I VLLR+ D+GGK EA
Sbjct: 184 KLIDMLLQIKPKSEMSMKIVLILEAMDCVMDEILEVYGKFSKEINRVLLRVCDIGGKEEA 243
Query: 238 SMGLKVLQKASVQRDELSEYFEFCRVIGVLNASQCPKIERIPEEDIRDLERIISGASAKK 297
+GL +++KA +Q D+LS YF+FCR IGVLN S+CP I RI EE+I +L+RI
Sbjct: 244 CIGLDIIRKAQLQGDKLSLYFDFCREIGVLNKSECPNILRINEEEIEELKRI-------- 295
Query: 298 SNNGVVDGNEEEKAIVVR-DFSASSIIESEKGL-ITVITHQWEVFDDDILVDVRGNNKVC 355
+EEKAIVVR D+ + + GL TVIT QWEVF DD++VDV+ +
Sbjct: 296 ------KNKDEEKAIVVRNDYE-----QLKNGLKTTVITDQWEVFVDDVIVDVQQHVPNV 344
Query: 356 NGVIGTTTTNPF-EESYSLVPYVPHVAHNQVLPDLISL 392
+ T NPF +E YS VPY P N LPDLISL
Sbjct: 345 TTLCVIHTNNPFVDECYSSVPYDP--VQNYELPDLISL 380
>Medtr4g114960.1 | clathrin assembly plant-like protein, putative |
HC | chr4:47396184-47393729 | 20130731
Length = 601
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 38/315 (12%)
Query: 5 KKATGALKDKNSIWVAKFSRKGPFRNPDLETVIIKATSHDEHSIDCKNVQRAFKWLHTSP 64
+KA GA+KD+ SI +AK + PDLE +++KATSH+E D K V+ S
Sbjct: 7 RKAIGAMKDQTSISIAKVAGN---LAPDLEVLVVKATSHEEVPADDKYVREILNLTSYSK 63
Query: 65 LYLKPLVWALSIRMQKTKSWVVALKGLMLIHGVFCCDLPVVQ-------RMGRLPFDFSN 117
Y+ + ++S R+ KT+ W+VA+K LML+H + P + R G F+ S+
Sbjct: 64 GYVNACLISISKRLTKTRDWIVAVKSLMLVHRLLVDGHPSFEYEIVHATRSGMRVFNMSD 123
Query: 118 FSDAHLAPAKAWGFNAFVRAYFAYLDQRSAFV-------------SSEVKKQKNKEGEVE 164
F D A + +W FVR Y YLDQ+ F+ E K E + +
Sbjct: 124 FRDE--AHSSSWDHAGFVRVYAMYLDQKVEFLVYNKKLKGVVDSGDGEFGSVKRNEEKSD 181
Query: 165 GTLMXXXXXX------XXXXAMIDMLLQIKPRNTDMNVGLVLEAMDCVIVEVFDVYSKFC 218
T + ++D +L KP N LVL A+ ++ + F +Y + C
Sbjct: 182 VTPVREMKAERVLDRLKHLLQILDSVLGCKPHGAAKNNRLVLVAIYQIVRDSFKLYVEIC 241
Query: 219 KKIATVLLRIYDVGGKLEASMGLKVLQ---KASVQRDELSEYFEFCRVIGVLNASQCPKI 275
+ ++ R + +E + ++ + AS DEL+ ++ +C+ G+ +S+ P++
Sbjct: 242 DVLGVLMDRFME----MEYAHCVQAFEFYVSASKMMDELAGFYGWCKDTGIARSSEYPEV 297
Query: 276 ERIPEEDIRDLERII 290
++I + + LE +
Sbjct: 298 QKITDSLLGTLEGFL 312
>Medtr3g080490.1 | clathrin assembly protein | LC |
chr3:36416634-36413839 | 20130731
Length = 931
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 158/341 (46%), Gaps = 48/341 (14%)
Query: 5 KKATGALKDKNSIWVAKFSRKGPFRNPDLETVIIKATSHDEHSIDCKNVQRAFKWLHTSP 64
+KA GA+KD+ SI +AK + +LE I+KAT+HD++ I+ + V + ++
Sbjct: 6 RKAIGAVKDQTSISLAKVTHAA-----NLEVTILKATTHDKNPIEERYVNEIVNIVSSNK 60
Query: 65 LYLKPLVWALSIRMQKTKSWVVALKGLMLIHGVFCCDLPVVQR-------MGRLPFDFSN 117
Y + RM KT++WVVALK LM++ +F P R G + S+
Sbjct: 61 AYAAACAQCIGKRMGKTRNWVVALKSLMIVLRIFQDGDPYFPREVFHSMKRGAKILNLSS 120
Query: 118 FSDAHLAPAKAWGFNAFVRAYFAYLDQR-SAFVSSEV------------KKQKNKEG--E 162
F D + + W + AF+R + YLD+R F++ ++ K Q+N+ G +
Sbjct: 121 FKDD--SNSSPWDYTAFIRTFALYLDERLDCFLTGKLQRRFTYNNRFHEKNQRNEPGIRD 178
Query: 163 VEGTLMXXXXXXXXXXAMIDMLLQIKPRNTDMNVGLVLEAMDCVIVEVFDVYSKFCKKIA 222
++ TL+ ++D + +P N LV ++ V+ E FD+Y +
Sbjct: 179 MKPTLVLNRITYWQR--LLDRAIGTRPTGAAKNNRLVQISLYAVVQESFDLYKDISDGLG 236
Query: 223 TVLLRIYDVGGKLEASM-GLKVLQKASVQRDELSEYFEFCRVIGVLNASQCPKIERIPEE 281
VL +++ L A + K+ Q DELS ++ FC IG+ + + P ++++ EE
Sbjct: 237 VVLDNFFNL--PLSACVTAFNACVKSYKQFDELSAFYSFCLNIGIGRSYEYPSVQKVSEE 294
Query: 282 DIRDLERIISG--------------ASAKKSNNGVVDGNEE 308
+ L+ + ++ KKSN G+ +E
Sbjct: 295 LMETLQAFLKDQASFHNTASKHFILSAQKKSNAGLSSSQDE 335
>Medtr8g106040.1 | ENTH/ANTH/VHS superfamily protein | HC |
chr8:44758195-44759989 | 20130731
Length = 439
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 140/309 (45%), Gaps = 21/309 (6%)
Query: 2 RVWKKATGALKDKNSIWVAKFSRKGPFRNPDLETVIIKATSHDEHSIDCKNVQRAFKWLH 61
R ++K +LK+++ I AK + F D+ +IIKATS D+ + K +Q K
Sbjct: 3 RRFQKVCTSLKEQSCISYAKIASAAGF--SDMNLIIIKATSPDDLPVHEKYIQHLLKLFS 60
Query: 62 TSPLYLKPLVWALSIRMQKTKSWVVALKGLMLIHGV---------FCCDLPVVQRMGRLP 112
SP + + R T+SW VALK L+L+H + +L + G +
Sbjct: 61 LSPSSCHSFTISFTRRFGTTRSWRVALKSLILLHRLLRSVQGNSPLWTELLWTRSNGLIS 120
Query: 113 FDFSNFSDAHLAPAKAWGFNAFVRAYFAYLDQRSAFVSSEVKKQKNKEGEVEGTLMXXXX 172
+F DA + + + FV +Y LD+ V+ + K +N++ E +
Sbjct: 121 LYPCHFKDATSSSTCSISYTKFVTSYAHLLDEALNCVALDNTKLENQQHLEEKNVTFQEK 180
Query: 173 XXX---------XXXAMIDMLLQIKPRNTDMNVGLVLEAMDCVIVEVFDVYSKFCKKIAT 223
++ID ++ P +V AM +I + F Y+ F ++I
Sbjct: 181 MKEMGETLEILPQLQSIIDRVIDCYPIGVATKSFIVQSAMKHIIRDSFICYTMFRREIVA 240
Query: 224 VLLRIYDVGGKLEASMGLKVLQKASVQRDELSEYFEFCRVIGVLNASQCPKIERIPEEDI 283
V+ ++++ + + + +KASVQ ++L E++E+C+ G+ + P +E IP I
Sbjct: 241 VMENLFEMSYR-NSIAAFNIYKKASVQTNKLCEFYEWCKAKGLCGYYEYPLLEPIPHIQI 299
Query: 284 RDLERIISG 292
+ LE +SG
Sbjct: 300 KALESFLSG 308
>Medtr3g106900.2 | clathrin assembly plant-like protein, putative |
HC | chr3:49401713-49404604 | 20130731
Length = 641
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 14/149 (9%)
Query: 5 KKATGALKDKNSIWVAKFSRKGPFRNPDLETVIIKATSHDEHSIDCKNVQRAFKWLHTSP 64
+KA GA+KD+ SI +AK + P+LE I+KATSHDE K ++ + S
Sbjct: 7 RKAIGAVKDQTSIGIAKVASN---MAPELEVAIVKATSHDEDPASEKYIREILNLMSYSR 63
Query: 65 LYLKPLVWALSIRMQKTKSWVVALKGLMLIHGVFCCDLPVVQ-------RMGRLPFDFSN 117
Y+ V A+S R+ KT+ W+VALK L+L+H + P+ Q R G + S+
Sbjct: 64 GYVNACVSAVSKRLGKTRDWIVALKALILVHRLMNDGTPIFQEEIMYAPRRGTRLLNMSD 123
Query: 118 FSD-AHLAPAKAWGFNAFVRAYFAYLDQR 145
F D AH + +W +AFVR Y YLDQR
Sbjct: 124 FRDEAH---SSSWDHSAFVRTYALYLDQR 149
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 180 MIDMLLQIKPRNTDMNVGLVLEAMDCVIVEVFDVYSKFCKKIATVLLRIYDVGGKLEASM 239
++D L +P N ++L A+ ++ E F +Y+ C+ +A +L + +D+ +
Sbjct: 244 LLDRFLACRPTGLAKNNRMILIALYPLVKESFQLYADICEVLAVLLDKFFDMEYP-DCVK 302
Query: 240 GLKVLQKASVQRDELSEYFEFCRVIGVLNASQCPKIERIPEEDIRDLERII 290
A+ Q DEL ++ +C+ G+ +S+ P+++RI + + LE +
Sbjct: 303 AFDAYASAAKQIDELVAFYNWCKESGLARSSEYPEVQRITSKLLETLEEFV 353
>Medtr3g106900.1 | clathrin assembly plant-like protein, putative |
HC | chr3:49401686-49404604 | 20130731
Length = 641
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 14/149 (9%)
Query: 5 KKATGALKDKNSIWVAKFSRKGPFRNPDLETVIIKATSHDEHSIDCKNVQRAFKWLHTSP 64
+KA GA+KD+ SI +AK + P+LE I+KATSHDE K ++ + S
Sbjct: 7 RKAIGAVKDQTSIGIAKVASN---MAPELEVAIVKATSHDEDPASEKYIREILNLMSYSR 63
Query: 65 LYLKPLVWALSIRMQKTKSWVVALKGLMLIHGVFCCDLPVVQ-------RMGRLPFDFSN 117
Y+ V A+S R+ KT+ W+VALK L+L+H + P+ Q R G + S+
Sbjct: 64 GYVNACVSAVSKRLGKTRDWIVALKALILVHRLMNDGTPIFQEEIMYAPRRGTRLLNMSD 123
Query: 118 FSD-AHLAPAKAWGFNAFVRAYFAYLDQR 145
F D AH + +W +AFVR Y YLDQR
Sbjct: 124 FRDEAH---SSSWDHSAFVRTYALYLDQR 149
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 180 MIDMLLQIKPRNTDMNVGLVLEAMDCVIVEVFDVYSKFCKKIATVLLRIYDVGGKLEASM 239
++D L +P N ++L A+ ++ E F +Y+ C+ +A +L + +D+ +
Sbjct: 244 LLDRFLACRPTGLAKNNRMILIALYPLVKESFQLYADICEVLAVLLDKFFDMEYP-DCVK 302
Query: 240 GLKVLQKASVQRDELSEYFEFCRVIGVLNASQCPKIERIPEEDIRDLERII 290
A+ Q DEL ++ +C+ G+ +S+ P+++RI + + LE +
Sbjct: 303 AFDAYASAAKQIDELVAFYNWCKESGLARSSEYPEVQRITSKLLETLEEFV 353
>Medtr2g008170.1 | clathrin assembly plant-like protein, putative |
HC | chr2:1328318-1330353 | 20130731
Length = 607
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 145/332 (43%), Gaps = 54/332 (16%)
Query: 5 KKATGALKDKNSIWVAKFSRKGPFRNPDLETVIIKATSHDEHSIDCKNVQRAFKWLHTSP 64
+KA GA+KD+ SI +A DL+ I+KAT HDE+ + K ++ S
Sbjct: 7 RKAFGAVKDQTSIGLAMVGSSTSL--ADLDVAIVKATRHDEYPAEEKYIREILSLTCYSR 64
Query: 65 LYLKPLVWALSIRMQKTKSWVVALKGLMLIHGVFCCDLPVVQ-------RMGRLPFDFSN 117
++ V LS R+ KTK+W VALK L+LI + P + R G + S+
Sbjct: 65 AFISACVNTLSRRLSKTKNWTVALKTLILIQRLLEEGDPAYEQEIFFSTRRGTRLLNMSD 124
Query: 118 FSDAHLAPAKAWGFNAFVRAYFAYLDQRSAF-VSSEVKKQ-------------------- 156
F D+ + + +W F+AFVR Y YLD+R + + S K+
Sbjct: 125 FRDS--SQSGSWDFSAFVRTYSLYLDERLEYKMQSRRGKRSMFGYDEDEEERERERERER 182
Query: 157 ---------KNKEGEVEGT------LMXXXXXXXXXXAMIDMLLQIKPRNTDMNVGLVLE 201
K +E V T L +++ L +P T + +V+
Sbjct: 183 ESEREKERDKGREIVVRSTPVREMKLEQIFSKMQHLQLLLERFLACRPTGTAKSHRIVIV 242
Query: 202 AMDCVIVEVFDVYSKFCKKIATVLLRIYDVGGKLEASMGLKVLQ---KASVQRDELSEYF 258
A+ ++ E F Y + ++ ++ R D ++ + +KV + Q DEL ++
Sbjct: 243 ALYPIVKESFQSYYDISEILSILIDRFSD----MDVADCIKVYDIFCRIGKQFDELDLFY 298
Query: 259 EFCRVIGVLNASQCPKIERIPEEDIRDLERII 290
+ + IG+ +S+ P+I+++ + + +E I
Sbjct: 299 GWSKNIGICRSSEYPEIDKVTPKKLEVMEEFI 330
>Medtr2g037980.1 | clathrin assembly plant-like protein | HC |
chr2:16484005-16479782 | 20130731
Length = 592
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 140/323 (43%), Gaps = 30/323 (9%)
Query: 4 WKKATGALKDKNSIWVAKFSRKGPFRNPDLETVIIKATSHDEHSIDCKNVQRAF--KWLH 61
++KA GALKD + +AK + + +L+ I+KAT+H E+ ++V++ F H
Sbjct: 7 FRKAYGALKDSTKVGLAKVNSE----YKELDIAIVKATNHVEYPPKERHVRKVFYATSAH 62
Query: 62 TSPLYLKPLVWALSIRMQKTKSWVVALKGLMLIH-------GVFCCDLPVVQRMGRLPFD 114
+ + LS R+ KT+SW+VALK L++IH F +L R G +
Sbjct: 63 QPRADVAYCIHKLSKRLAKTRSWIVALKTLIVIHRTLREGDPTFREELLNYSRKGHI-LQ 121
Query: 115 FSNFSDAHLAPAKAWGFNAFVRAYFAYLDQR-------------SAFVSSEVKKQKNKEG 161
SNF D + AW +A+VR Y +L++R V S + K
Sbjct: 122 ISNFKDD--SSPLAWDCSAWVRTYALFLEERLECFRVLKYDIESERLVKSSATEPKPHSR 179
Query: 162 EVEGTLMXXXXXXXXXXAMIDMLLQIKPRNTDMNVGLVLEAMDCVIVEVFDVYSKFCKKI 221
++ L+ +P N LV A+ V+ E F +Y I
Sbjct: 180 TRSLANDDLLEQLPALQQLLFRLIGCQPEGCAYNNYLVQYALALVLKESFKIYCALNDGI 239
Query: 222 ATVLLRIYDVGGKLEASMGLKVLQKASVQRDELSEYFEFCRVIGVLNASQCPKIERIPEE 281
++ ++ + EA L + ++A Q + L+E++++C+ + + Q P + + P
Sbjct: 240 INLVDMFFET-SRHEAVKALNIYKRAGQQAENLAEFYDYCKGLDLARNFQFPTLRQPPPS 298
Query: 282 DIRDLERIISGASAKKSNNGVVD 304
+ +E I A S N ++
Sbjct: 299 FLATMEEYIKEAPQSGSVNNRLE 321
>Medtr4g127440.1 | clathrin assembly plant-like protein | HC |
chr4:52898132-52902112 | 20130731
Length = 579
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 146/314 (46%), Gaps = 33/314 (10%)
Query: 1 MRVWKKATGALKDKNSIWVAKFSRKGPFRNPDLETVIIKATSHDEHSIDCKNVQRAF--K 58
+ W+KA GALKD + +AK + + +L+ I+KATSH E+ ++V++ F
Sbjct: 4 FQTWRKAYGALKDSTKVGLAKVNSE----YKELDIAIVKATSHLEYPPKERHVRKIFYAT 59
Query: 59 WLHTSPLYLKPLVWALSIRMQKTKSWVVALKGLMLIHGV-------FCCDLPVVQRMGRL 111
H + + LS R+ KT++W+VA+K L+++H + F DL V R+
Sbjct: 60 SAHQPRTDVSYCLQTLSKRLLKTRNWIVAIKTLIVVHRILREGDLSFKEDL--VNYSHRV 117
Query: 112 PF-DFSNFSDAHLAPAKAWGFNAFVRAYFAYLDQRSAFV-----------SSEVKKQKNK 159
F SNF D + AW +A+VR Y +L++R S+++ +
Sbjct: 118 RFLRISNFKDD--SSPLAWDCSAWVRTYAQFLEERLECFRIFKYDIEFERSTKLSSPAST 175
Query: 160 EGEVEGTLMXXXXXXXXXXAMIDMLLQI---KPRNTDMNVGLVLEAMDCVIVEVFDVYSK 216
+ T++ A+ +L ++ +P N L+ A+ ++ E + +YS
Sbjct: 176 KTHSRTTVLTSDELLEQLPALQQLLYRLVCCQPEGAAFNNYLIQYALALILKESYKIYSS 235
Query: 217 FCKKIATVLLRIYDVGGKLEASMGLKVLQKASVQRDELSEYFEFCRVIGVLNASQCPKIE 276
I + +D+ K +A L + ++A Q + L++++E+C+ + + Q P +
Sbjct: 236 LNDGIIKLGDVFFDM-AKHDAINALHIYKRAGQQAECLADFYEYCKGLDLARNFQFPVLR 294
Query: 277 RIPEEDIRDLERII 290
+ P + +E I
Sbjct: 295 QPPPSFVATMEEYI 308
>Medtr8g008860.1 | clathrin assembly plant-like protein | HC |
chr8:1923626-1926030 | 20130731
Length = 588
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 147/342 (42%), Gaps = 52/342 (15%)
Query: 5 KKATGALKDKNSIWVAKFSRKGPFRNPDLETVIIKATSHDEHSIDCKNVQRAFKWLHTSP 64
++A GA+KD+ SI +AK DL+ I+KAT HDE+ + ++++ S
Sbjct: 7 RRAIGAVKDQTSIGIAKVGSSASI--GDLQVAIVKATKHDENPAEERHIREILSLTCYSR 64
Query: 65 LYLKPLVWALSIRMQKTKSWVVALKGLMLIHGVFCCD--------LPVVQRMGRLPFDFS 116
++ V LS R+ KT SW VALK L+LI + QR RL + S
Sbjct: 65 AFISSCVNTLSKRLIKTSSWTVALKTLVLIQRLLADGDRAYEQEIFFSTQRGTRL-LNMS 123
Query: 117 NFSDAHLAPAKAWGFNAFVRAYFAYLDQR------------SAFVSSEVKKQKNKEGE-- 162
+F D + + +W +++FVR Y YLD+R F E ++++++E +
Sbjct: 124 DFRDK--SKSNSWDYSSFVRTYALYLDERLEYRMQYKRGRSGRFAYDEDEEEQSRESKRE 181
Query: 163 ------------VEGTLMXXXXXXXXXXAM------IDMLLQIKPRNTDMNVGLVLEAMD 204
V T + M ++ + +P +V+ A+
Sbjct: 182 RYRERDRDKEIVVRSTPLREMKTDDLFSRMQHLQLLLERFMACRPTGRAKTHRMVIVALY 241
Query: 205 CVIVEVFDVYSKFCKKIATVLLRIYDVGGKLEASMGLKVLQ---KASVQRDELSEYFEFC 261
++ E F Y + ++L D ++E KV + Q DEL ++ +
Sbjct: 242 PIVKESFQTY----HDMTSILGIFIDRFTEMEVPEYYKVYDVFCRVGKQYDELDLFYSWS 297
Query: 262 RVIGVLNASQCPKIERIPEEDIRDLERIISGASAKKSNNGVV 303
+ IG+ +S+ P+IE++ + + +++ I S N ++
Sbjct: 298 KSIGIGRSSEYPEIEKVTTKKLDLMDQFIRDKSLVSQANKLI 339
>Medtr4g115420.1 | clathrin assembly plant-like protein, putative |
HC | chr4:47678478-47672469 | 20130731
Length = 545
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 145/304 (47%), Gaps = 27/304 (8%)
Query: 5 KKATGALKDKNSIWVAKFSRKGPFRNPDLETVIIKATSHDEHSIDCKNVQRAFKWLH-TS 63
+KA GALKD ++ +AK + +L+ I++AT+H E K+++ F + T
Sbjct: 10 RKALGALKDTTTVSLAKVNSG----YKELDIAIVRATNHVERPAKEKHIRAIFSAISATR 65
Query: 64 PLY-LKPLVWALSIRMQKTKSWVVALKGLMLIH-------GVFCCDLPVVQRMGRLPFDF 115
P + + AL+ R+ KT +W VALK L++IH F +L R +
Sbjct: 66 PRADVAYCIHALARRLSKTHNWAVALKTLIVIHRALREVDPTFHEELINYGRSRSHMLNM 125
Query: 116 SNFSDAHLAPAKAWGFNAFVRAYFAYLDQRSA---FVSSEVKKQKNKEGEVEGTLMXXXX 172
++F D + AW ++A+VR+Y +L++R + +++ + + +++ +
Sbjct: 126 AHFKDD--SSPNAWDYSAWVRSYALFLEERLECFRVLKYDIEADRPRTKDLDTAELLEQL 183
Query: 173 XXXXXXAMIDMLLQI---KPRNTDMNVGLVLEAMDCVIVEVFDVYSKFCKKIATVLLRIY 229
A+ +L ++ +P+ +N ++ A+ V E +Y ++ + +
Sbjct: 184 P-----ALQQLLYRVIGCQPQGAAVNNFVIQLALQLVASESIKIYQAISDGTVNMVDKFF 238
Query: 230 DVGGKLEASMGLKVLQKASVQRDELSEYFEFCRVIGVLNASQCPKIERIPEEDIRDLERI 289
++ + +A L + ++ +Q + LSE++E CR + + + K+E+ P ++ +E
Sbjct: 239 EMQ-REDALKALDIYRRVGLQAERLSEFYEICRNLDIGRGEKFIKVEQPPSSFMQAMEDY 297
Query: 290 ISGA 293
+ A
Sbjct: 298 VKDA 301
>Medtr0530s0020.1 | clathrin assembly protein | HC |
scaffold0530:8161-4528 | 20130731
Length = 532
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 127/301 (42%), Gaps = 42/301 (13%)
Query: 33 LETVIIKATSHDEHSIDCKNVQRAFKWLHTSPLYLKP------LVWALSIRMQKTKSWVV 86
L+T I+KAT+ D K+++ F+ L S KP + +L+ R+ +T +W V
Sbjct: 17 LDTAIVKATNFDHALPKEKHIRYIFQSLSPS----KPRSEVAYCIHSLARRLNETNNWAV 72
Query: 87 ALKGLMLIH-GVFCCDLPVVQRM-------GRLPFDFSNFSDAHLAPAKAWGFNAFVRAY 138
LK L++IH + D V + + G L D S+F D + A ++ ++R Y
Sbjct: 73 VLKTLIIIHRAMRELDNTVWEELVNYSKGRGHL-IDISHFHDTSIP--NALDYSVWIRNY 129
Query: 139 FAYLDQR-----------SAFVSSEVKKQKNKEGEVEGTLMXXXXXXXXXXAMIDMLLQI 187
+L +R +A+ S +K KE ++ LL
Sbjct: 130 GLFLGERLRCFIIVNHDVAAYTPSNSQKLDTKE---------LLEQLPALQNLLFRLLDS 180
Query: 188 KPRNTDMNVGLVLEAMDCVIVEVFDVYSKFCKKIATVLLRIYDVGGKLEASMGLKVLQKA 247
KP L+ A+ + E +Y ++ +L + +++ + +A LK+ +K+
Sbjct: 181 KPGGASAFNRLIQYALSMIAGESVKIYVAITVRVVELLDKFFEMN-RDDAVSALKIYRKS 239
Query: 248 SVQRDELSEYFEFCRVIGVLNASQCPKIERIPEEDIRDLERIISGASAKKSNNGVVDGNE 307
Q + LS++FE CR + + I++ P + +E I A V+G E
Sbjct: 240 GSQAERLSQFFETCRALDFGRGHKFINIKQPPASFMTTMEEYIKEAPNTLMLEYEVNGKE 299
Query: 308 E 308
E
Sbjct: 300 E 300