Miyakogusa Predicted Gene

Lj4g3v2400850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2400850.1 Non Characterized Hit- tr|K4AXM8|K4AXM8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum GN=Sol,46.15,3e-17,
,CUFF.50945.1
         (124 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g131720.1 | hypothetical protein | HC | chr4:54952002-5495...   163   3e-41
Medtr2g022610.1 | hypothetical protein | HC | chr2:7835123-78362...   160   3e-40

>Medtr4g131720.1 | hypothetical protein | HC |
           chr4:54952002-54953188 | 20130731
          Length = 117

 Score =  163 bits (413), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 91/120 (75%), Positives = 99/120 (82%), Gaps = 8/120 (6%)

Query: 1   MEVAVELEDDLFFADLSKQLSLLIMDEDDDPLASCAVHP-QSFSGAIHPPPQSAILYEQV 59
           MEVAVELEDDL+FADLSKQ+SLLIMDED+DPL S   H  QSFSGAIHPPPQS  LYEQ+
Sbjct: 1   MEVAVELEDDLYFADLSKQISLLIMDEDEDPLTSHPSHSLQSFSGAIHPPPQSNFLYEQM 60

Query: 60  -LRRQSKGTGVFIPQS-TQPRRKQRKGRTSSYAKYQKQSQD-TRMISHVPIKNPFKETND 116
            LRRQSKGTGVFIPQS TQPRRK RKGR+SSYAK QKQSQD TR +S    +N FK  N+
Sbjct: 61  ALRRQSKGTGVFIPQSTTQPRRKHRKGRSSSYAKCQKQSQDTTRTVS----QNSFKPINN 116


>Medtr2g022610.1 | hypothetical protein | HC | chr2:7835123-7836296
           | 20130731
          Length = 115

 Score =  160 bits (404), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 80/115 (69%), Positives = 97/115 (84%), Gaps = 2/115 (1%)

Query: 1   MEVAVELEDDLFFADLSKQLSLLIMDEDDDPLASCAVHP-QSFSGAIHPPPQSAILYEQV 59
           MEVA+E+EDDLFFA+LSK+++LLIMDED+DPLAS   +  Q FS AIHPPPQ    YEQ 
Sbjct: 1   MEVALEMEDDLFFANLSKEIALLIMDEDEDPLASQPPNSLQDFSRAIHPPPQFDFFYEQA 60

Query: 60  L-RRQSKGTGVFIPQSTQPRRKQRKGRTSSYAKYQKQSQDTRMISHVPIKNPFKE 113
           L RR+SKGTGVFIPQ+TQPRR+ +KGR++S++KYQKQSQDTRMIS VP KN  K+
Sbjct: 61  LIRRESKGTGVFIPQATQPRRRYKKGRSNSFSKYQKQSQDTRMISQVPNKNSIKQ 115