Miyakogusa Predicted Gene

Lj4g3v2400820.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2400820.1 tr|G7JFL4|G7JFL4_MEDTR ATP
phosphoribosyltransferase OS=Medicago truncatula GN=MTR_4g130680 PE=4
SV=,80.37,0,Periplasmic binding protein-like II,NULL;
GlnB-like,Nitrogen regulatory PII-like, alpha/beta;
ATP_P_,CUFF.50939.1
         (376 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g130680.1 | ATP phosphoribosyltransferase catalytic subuni...   631   0.0  
Medtr2g006040.1 | ATP phosphoribosyltransferase catalytic subuni...   595   e-170

>Medtr4g130680.1 | ATP phosphoribosyltransferase catalytic subunit |
           HC | chr4:54450982-54445617 | 20130731
          Length = 373

 Score =  631 bits (1627), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/377 (81%), Positives = 337/377 (89%), Gaps = 8/377 (2%)

Query: 4   MMSFQTCFRVKTTTCYASQ----RTAGEVLTANPSSRLSERQEVRLGLPSKGRMAADTLE 59
           M++  +  R+    CYAS      T  +VL  N  SR    QE+RLGLPSKGRM++DTL+
Sbjct: 1   MLTMMSQIRLPLYCCYASSTSISETHHQVLNGNTVSR----QEIRLGLPSKGRMSSDTLD 56

Query: 60  LLKNCQLSVKQVNPRQYVAQIPQISSLEVWFQRPSDIVRKLSSGDLDLGIVGLDTLREHG 119
           LLK+CQLSVKQVNPRQYVAQIPQIS+LEVWFQRP DIVRKL SGDLDLGIVGLD L E G
Sbjct: 57  LLKDCQLSVKQVNPRQYVAQIPQISNLEVWFQRPKDIVRKLLSGDLDLGIVGLDVLTEFG 116

Query: 120 KDDPDLIVVHEALEYGDCRLSLAIPKYGIFENIHSLEELAKMSQWTEERPLRVATGFTYL 179
           + + DLIVVHEALEYGDCRLS+AIP+YGIFEN++SLEELAKM QWTE++PLRVATGFTYL
Sbjct: 117 QGNEDLIVVHEALEYGDCRLSIAIPQYGIFENVNSLEELAKMPQWTEDKPLRVATGFTYL 176

Query: 180 GPKFVKDKGLKNVAFSTGDGALEAAPAMGTADAILDLVSSGITLKENNLKEIEGGVVLES 239
           GPKF+KD G+K+VAFST DGALEAAPAMG ADAILDLVSSG TLKENNLKEIEGG VLES
Sbjct: 177 GPKFMKDNGIKHVAFSTADGALEAAPAMGIADAILDLVSSGTTLKENNLKEIEGGTVLES 236

Query: 240 QAVLVASRKSMVQRKGVLETTHEMLERLEAHLRAIGQFTVTANMRGSSAEEVAERVLSQP 299
           QA LVASR+SM+ RKGVLETTHEMLERLEAHLRA+GQFTV ANMRGSSAEEVAERVLSQP
Sbjct: 237 QAALVASRRSMIGRKGVLETTHEMLERLEAHLRAMGQFTVVANMRGSSAEEVAERVLSQP 296

Query: 300 SLSGLQGPTVSPVFCKRDGKVTADYYAIVICVPKKALYKSVQQLRAIGGSGVLISPLTYI 359
           SL+GLQGPTVSPVFCKRDGKV+ADYYAIVICVPKKALYKS+QQLRAIGGSGVL+SPLTYI
Sbjct: 297 SLAGLQGPTVSPVFCKRDGKVSADYYAIVICVPKKALYKSIQQLRAIGGSGVLVSPLTYI 356

Query: 360 FDEETPRWRQLLSELGL 376
           FDEETPRWRQLLS+LGL
Sbjct: 357 FDEETPRWRQLLSKLGL 373


>Medtr2g006040.1 | ATP phosphoribosyltransferase catalytic subunit |
           HC | chr2:429631-426433 | 20130731
          Length = 395

 Score =  595 bits (1534), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 290/353 (82%), Positives = 315/353 (89%), Gaps = 22/353 (6%)

Query: 46  GLPSKGRMAADTLELLKNCQLSVKQVNPRQYVAQIPQISSLEVWFQRPSDIVRKLSSGDL 105
           GLPSKGRM++DTL+LLK+CQLSVKQVNPRQYVAQIPQ+S+LEVWFQRP DIVRKL SGDL
Sbjct: 43  GLPSKGRMSSDTLDLLKDCQLSVKQVNPRQYVAQIPQLSNLEVWFQRPKDIVRKLLSGDL 102

Query: 106 DLGIVGLDTLREHGK----------------------DDPDLIVVHEALEYGDCRLSLAI 143
           DLGIVGLD + E G+                       + DLI+VHEALEYGDCRLS+AI
Sbjct: 103 DLGIVGLDIVTEFGQMSIIFILYTRQLPLFMFIILCQGNDDLIIVHEALEYGDCRLSIAI 162

Query: 144 PKYGIFENIHSLEELAKMSQWTEERPLRVATGFTYLGPKFVKDKGLKNVAFSTGDGALEA 203
           P+YGIFEN++SLEELAKM QWT+E+PLRVATGFTYLGPKF+KD G+K+VAFST DGALEA
Sbjct: 163 PQYGIFENVNSLEELAKMPQWTKEKPLRVATGFTYLGPKFMKDNGIKHVAFSTADGALEA 222

Query: 204 APAMGTADAILDLVSSGITLKENNLKEIEGGVVLESQAVLVASRKSMVQRKGVLETTHEM 263
           APAMG ADAILDLVSSG TLKENNLKEIEGG VLESQA LVASRKSM+ RKGVLETTHEM
Sbjct: 223 APAMGIADAILDLVSSGTTLKENNLKEIEGGTVLESQAALVASRKSMIGRKGVLETTHEM 282

Query: 264 LERLEAHLRAIGQFTVTANMRGSSAEEVAERVLSQPSLSGLQGPTVSPVFCKRDGKVTAD 323
           LERLEAHLRA+GQFTVTANMRGSSAEEVAERVLSQPSL+GLQGPTVSPVF KRDGKV+AD
Sbjct: 283 LERLEAHLRAMGQFTVTANMRGSSAEEVAERVLSQPSLAGLQGPTVSPVFLKRDGKVSAD 342

Query: 324 YYAIVICVPKKALYKSVQQLRAIGGSGVLISPLTYIFDEETPRWRQLLSELGL 376
           YYAIVICVPKKALYKS+QQLRAIGGSGVLISPLTYIFDEETPRWRQLLS+LGL
Sbjct: 343 YYAIVICVPKKALYKSIQQLRAIGGSGVLISPLTYIFDEETPRWRQLLSKLGL 395