Miyakogusa Predicted Gene

Lj4g3v2379450.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2379450.1 Non Characterized Hit- tr|I3SPM1|I3SPM1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.43,0,Ferritin-like,Ferritin/ribonucleotide reductase-like;
SUBFAMILY NOT NAMED,NULL; RIBONUCLEOSIDE-DIPHO,CUFF.50896.1
         (351 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g117370.1 | ribonucleoside-diphosphate reductase small cha...   603   e-173
Medtr1g050472.1 | ribonucleoside-diphosphate reductase small cha...   495   e-140
Medtr0268s0080.1 | ribonucleoside-diphosphate reductase small ch...   494   e-140
Medtr8g469010.1 | ribonucleoside-diphosphate reductase small cha...   490   e-139
Medtr7g029110.1 | ribonucleoside-diphosphate reductase small cha...   472   e-133
Medtr6g005270.1 | ribonucleoside-diphosphate reductase small cha...    49   6e-06

>Medtr4g117370.1 | ribonucleoside-diphosphate reductase small chain
           | HC | chr4:48682564-48678758 | 20130731
          Length = 341

 Score =  603 bits (1555), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 292/351 (83%), Positives = 310/351 (88%), Gaps = 10/351 (2%)

Query: 1   MGSLENGPARKETKQQLVPAQTEHEHEQEPILMEQTQRFCMFPIRYKQVWEMYKKAQASF 60
           MGSLENG           P +   E  +EPILM+QTQRFCMFP+RYKQ+WEMYKKA+ASF
Sbjct: 1   MGSLENG----------TPKKIREEETEEPILMKQTQRFCMFPVRYKQLWEMYKKAEASF 50

Query: 61  WTAEEVDLTYDVQHWATLSNSEKHFITHVLAFFAASDGIVLENLAARFLNDVQIPEARAF 120
           WTAEEVDL+YDVQHWATLS+SEKHFI+HVLAFFA SDGIVLENLAARFLNDVQIPEARAF
Sbjct: 51  WTAEEVDLSYDVQHWATLSDSEKHFISHVLAFFATSDGIVLENLAARFLNDVQIPEARAF 110

Query: 121 YGFQIAMENIHSEMYSLLLETLIKDSREKHRLFNAIENLPCVARKAEWALNWINSSTSFA 180
           YGFQIA+ENIHSEMYSLLLET IKDSREKH+LFNAIENLPCVARKAEWAL+WINSSTSFA
Sbjct: 111 YGFQIAIENIHSEMYSLLLETYIKDSREKHKLFNAIENLPCVARKAEWALSWINSSTSFA 170

Query: 181 ERLVAFACIEXXXXXXXXXXXXWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLQR 240
           ERLV FAC+E            WLKKRGLMPGLTFSNELISRDEGLHCDFAC+LYSLL R
Sbjct: 171 ERLVGFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACMLYSLLLR 230

Query: 241 PLDSERVHHIVHEAVEIETEFVCEALPCALIGMNSTLMSQYIKFVADRLLVSLGYQKKYN 300
            LDSERV +IVHEAVEIETEFVC+ALPCALIGMNS LMSQYIKFVADRLLVSLG  K YN
Sbjct: 231 QLDSERVQNIVHEAVEIETEFVCDALPCALIGMNSKLMSQYIKFVADRLLVSLGCLKIYN 290

Query: 301 VGNPFDWMEFISLQGKANFFERRVGEYQKASVMSSLQDAGKNFVFKLDEDF 351
           V NPFDWM+FISLQGKANFFERRVG+YQKASVMSSLQD GKNFVFKLDEDF
Sbjct: 291 VENPFDWMDFISLQGKANFFERRVGDYQKASVMSSLQDDGKNFVFKLDEDF 341


>Medtr1g050472.1 | ribonucleoside-diphosphate reductase small chain
           | HC | chr1:19456521-19458475 | 20130731
          Length = 330

 Score =  495 bits (1274), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 234/325 (72%), Positives = 271/325 (83%), Gaps = 1/325 (0%)

Query: 28  QEPILMEQTQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLTYDVQHWATLSNSEKHFIT 87
           +EP+L     RFCMFPI+Y ++WEMYKKA+ASFWTAEEVDL+ D++HW  L++ E+HFI+
Sbjct: 6   EEPLLAPNPDRFCMFPIQYPKIWEMYKKAEASFWTAEEVDLSSDLKHWQNLTDGERHFIS 65

Query: 88  HVLAFFAASDGIVLENLAARFLNDVQIPEARAFYGFQIAMENIHSEMYSLLLETLIKDSR 147
           HVLAFFAASDGIVLENLA RF+ ++Q+ EARAFYGFQIA+ENIHSEMYSLLLET I DS 
Sbjct: 66  HVLAFFAASDGIVLENLAGRFMKEIQVSEARAFYGFQIAIENIHSEMYSLLLETYISDSA 125

Query: 148 EKHRLFNAIENLPCVARKAEWALNWINSSTSFAERLVAFACIEXXXXXXXXXXXXWLKKR 207
           EK+RLF+AIE +PC+A+KA+WA+ WI+SS SFAER+VAFAC+E            WLKKR
Sbjct: 126 EKNRLFHAIETIPCIAKKADWAMKWIDSSDSFAERIVAFACVEGIFFSGSFCAIFWLKKR 185

Query: 208 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQRPLDSERVHHIVHEAVEIETEFVCEALP 267
           GLMPGLTFSNELISRDEGLHCDFACLLYSLL++ L SERV  IV +AVEIE EFVC ALP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRKKLSSERVKEIVCDAVEIEREFVCHALP 245

Query: 268 CALIGMNSTLMSQYIKFVADRLLVSLGYQKKYNVGNPFDWMEFISLQGKANFFERRVGEY 327
           CAL+GMN  LMS YI+FVADRLL  LG +K YNV NPFDWME ISLQGK NFFE+RVGEY
Sbjct: 246 CALVGMNGGLMSTYIEFVADRLLGELGCEKVYNVQNPFDWMELISLQGKTNFFEKRVGEY 305

Query: 328 QKASVMSSLQDAG-KNFVFKLDEDF 351
           QKASVM+SL   G  +F FKLDEDF
Sbjct: 306 QKASVMNSLNGNGAADFCFKLDEDF 330


>Medtr0268s0080.1 | ribonucleoside-diphosphate reductase small chain
           | HC | scaffold0268:22239-23602 | 20130731
          Length = 330

 Score =  494 bits (1272), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 235/325 (72%), Positives = 270/325 (83%), Gaps = 1/325 (0%)

Query: 28  QEPILMEQTQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLTYDVQHWATLSNSEKHFIT 87
           +EP+L     RFCMFPI+Y ++WEMYKKA+ASFWTAEEVDL+ D++HW  L++ E+HFI+
Sbjct: 6   EEPLLAPNPDRFCMFPIQYPKIWEMYKKAEASFWTAEEVDLSSDLKHWNNLTDGERHFIS 65

Query: 88  HVLAFFAASDGIVLENLAARFLNDVQIPEARAFYGFQIAMENIHSEMYSLLLETLIKDSR 147
           HVLAFFAASDGIVLENLA RF+ +VQI EARAFYGFQIA+ENIHSEMYSLL+ET I DS 
Sbjct: 66  HVLAFFAASDGIVLENLAGRFMKEVQISEARAFYGFQIAIENIHSEMYSLLIETYISDSA 125

Query: 148 EKHRLFNAIENLPCVARKAEWALNWINSSTSFAERLVAFACIEXXXXXXXXXXXXWLKKR 207
           EK+RLF+AIE +PC+A+KA+WA+ WI+SS SFAER+VAFAC+E            WLKKR
Sbjct: 126 EKNRLFHAIETIPCIAKKADWAMKWIDSSDSFAERIVAFACVEGIFFSGSFCAIFWLKKR 185

Query: 208 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQRPLDSERVHHIVHEAVEIETEFVCEALP 267
           GLMPGLTFSNELISRDEGLHCDFACLLYSLLQ+ L SERV  IV  AVEIE EFVC+ALP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQKKLTSERVKEIVCNAVEIEREFVCKALP 245

Query: 268 CALIGMNSTLMSQYIKFVADRLLVSLGYQKKYNVGNPFDWMEFISLQGKANFFERRVGEY 327
           CAL+GMN  LMS YI+FVADRLL  LG +K YNV NPFDWME ISLQGK NFFE+RVGEY
Sbjct: 246 CALVGMNGGLMSTYIEFVADRLLGELGCEKVYNVQNPFDWMELISLQGKTNFFEKRVGEY 305

Query: 328 QKASVMSSLQDAG-KNFVFKLDEDF 351
           QKASVM+SL   G  +F F LDEDF
Sbjct: 306 QKASVMNSLNGNGAADFCFSLDEDF 330


>Medtr8g469010.1 | ribonucleoside-diphosphate reductase small chain
           | HC | chr8:25026278-25025046 | 20130731
          Length = 325

 Score =  490 bits (1262), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 231/324 (71%), Positives = 270/324 (83%), Gaps = 4/324 (1%)

Query: 28  QEPILMEQTQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLTYDVQHWATLSNSEKHFIT 87
           +EP+L     RFCMFPI+Y ++WEMYKKA+ASFWTAEEVDL+ D+QHW  L++ E+HFI+
Sbjct: 6   EEPLLAPNPDRFCMFPIQYPKIWEMYKKAEASFWTAEEVDLSSDLQHWNNLTDGERHFIS 65

Query: 88  HVLAFFAASDGIVLENLAARFLNDVQIPEARAFYGFQIAMENIHSEMYSLLLETLIKDSR 147
           H+LAFFAASDGIVLENLA RF+ +VQI EARAFYGFQIA+ENIHSEMYSLLLET I DS 
Sbjct: 66  HILAFFAASDGIVLENLAGRFMKEVQISEARAFYGFQIAIENIHSEMYSLLLETYISDSA 125

Query: 148 EKHRLFNAIENLPCVARKAEWALNWINSSTSFAERLVAFACIEXXXXXXXXXXXXWLKKR 207
           EK+RLF+AI+ +PC+A+KA+WAL WI+SS SFAER+VAFAC+E            WLKKR
Sbjct: 126 EKNRLFHAIDTIPCIAKKADWALKWIDSSDSFAERIVAFACVEGIFFSGSFCAIFWLKKR 185

Query: 208 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQRPLDSERVHHIVHEAVEIETEFVCEALP 267
           GLMPGLTFSNELISRDEGLHCDFACLLYSLL++ L +ERV  IV +AVEIE EFVC+ALP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLRQKLSTERVVKIVRDAVEIEREFVCDALP 245

Query: 268 CALIGMNSTLMSQYIKFVADRLLVSLGYQKKYNVGNPFDWMEFISLQGKANFFERRVGEY 327
           CAL+GMN  LMSQYI+FVADRLL  LG +K YNV NPFDWM+ ISLQGK NFFE+RVGEY
Sbjct: 246 CALVGMNGELMSQYIEFVADRLLGELGCEKVYNVQNPFDWMDLISLQGKTNFFEKRVGEY 305

Query: 328 QKASVMSSLQDAGKNFVFKLDEDF 351
           QKASVM    + G ++ F LDEDF
Sbjct: 306 QKASVM----NGGADYCFTLDEDF 325


>Medtr7g029110.1 | ribonucleoside-diphosphate reductase small chain
           | HC | chr7:10197814-10196629 | 20130731
          Length = 330

 Score =  472 bits (1214), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 232/325 (71%), Positives = 267/325 (82%), Gaps = 1/325 (0%)

Query: 28  QEPILMEQTQRFCMFPIRYKQVWEMYKKAQASFWTAEEVDLTYDVQHWATLSNSEKHFIT 87
           +EP+L     RFCMFPI+Y ++WEMYKKA+ASFWTAEEVDL+ D++HW  L++ E+HFI+
Sbjct: 6   EEPLLAPNPDRFCMFPIQYPKIWEMYKKAEASFWTAEEVDLSSDLKHWNNLTDGERHFIS 65

Query: 88  HVLAFFAASDGIVLENLAARFLNDVQIPEARAFYGFQIAMENIHSEMYSLLLETLIKDSR 147
           HVLAFFAASDGIVLENLA RF+ +VQI EARAFYGFQIA+ENIHSEMYSLL+ET I DS 
Sbjct: 66  HVLAFFAASDGIVLENLAGRFMKEVQISEARAFYGFQIAIENIHSEMYSLLIETYISDSA 125

Query: 148 EKHRLFNAIENLPCVARKAEWALNWINSSTSFAERLVAFACIEXXXXXXXXXXXXWLKKR 207
           EK+RLF+AIE +PC+A+KA+WA+ WI+SS SFAER+VAFAC+E            WLKKR
Sbjct: 126 EKNRLFHAIETIPCIAKKADWAMKWIDSSDSFAERIVAFACVEGIFFSGSFCAIFWLKKR 185

Query: 208 GLMPGLTFSNELISRDEGLHCDFACLLYSLLQRPLDSERVHHIVHEAVEIETEFVCEALP 267
           GLMPGLTFSNELISRDEGLHCDFACLLYSLL + L SERV  IV  AVEIE EFVC ALP
Sbjct: 186 GLMPGLTFSNELISRDEGLHCDFACLLYSLLLKKLTSERVKEIVCNAVEIEREFVCYALP 245

Query: 268 CALIGMNSTLMSQYIKFVADRLLVSLGYQKKYNVGNPFDWMEFISLQGKANFFERRVGEY 327
           CAL+GMN  LMS YI+FVADRLL  LG +K YNV NPFDWM+ ISLQG  NFFE+RVGEY
Sbjct: 246 CALVGMNGGLMSTYIEFVADRLLGDLGCEKVYNVQNPFDWMDLISLQGNTNFFEKRVGEY 305

Query: 328 QKASVMSSLQDAG-KNFVFKLDEDF 351
           QKASVM+SL   G  +F F LDEDF
Sbjct: 306 QKASVMNSLNGNGAADFCFSLDEDF 330


>Medtr6g005270.1 | ribonucleoside-diphosphate reductase small chain,
           putative | LC | chr6:682624-682876 | 20130731
          Length = 70

 Score = 49.3 bits (116), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/43 (53%), Positives = 28/43 (65%)

Query: 287 DRLLVSLGYQKKYNVGNPFDWMEFISLQGKANFFERRVGEYQK 329
           +RLL  LG +K YNV NPFDWM+ I LQGK  F    +G  +K
Sbjct: 25  ERLLDELGCEKVYNVHNPFDWMDLILLQGKTIFLISALGSIRK 67