Miyakogusa Predicted Gene

Lj4g3v2378360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2378360.1 Non Characterized Hit- tr|D8SLB5|D8SLB5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,28.01,2e-18,DNAJ_2,Heat shock protein DnaJ, N-terminal;
DNAJ_1,Heat shock protein DnaJ, conserved site; no
descr,NODE_73572_length_2172_cov_10.878453.path1.1
         (654 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g435140.1 | DnaJ heat shock amine-terminal domain protein ...   873   0.0  

>Medtr3g435140.1 | DnaJ heat shock amine-terminal domain protein |
           HC | chr3:11452614-11442856 | 20130731
          Length = 706

 Score =  873 bits (2255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 427/627 (68%), Positives = 503/627 (80%), Gaps = 26/627 (4%)

Query: 19  RAYAIPLILLAGAMLFQLVLIPNA-SPSHYDVLQIERYSSIETVQEAYNNLESKWSMKNS 77
           +AYA+PL+L + AM +QL LIPNA  PSHYDVL+I+ YSSI+ V+EAY NLESKW   NS
Sbjct: 22  KAYALPLLLFSAAMFYQLFLIPNAFPPSHYDVLRIKMYSSIDEVKEAYVNLESKW---NS 78

Query: 78  DAEASEIREFMKIRYAYELLTNRLWKRDYDRFGIDEQFHVLESAIKL---KNISQLNLDF 134
           D E S++ EF+KIRYAYELLTN LWKRDYD FGIDEQ H++ESA K    K+IS+L  +F
Sbjct: 79  DVEVSDVCEFLKIRYAYELLTNPLWKRDYDLFGIDEQLHIIESANKRYAGKSISEL--EF 136

Query: 135 PLLHXXXXXXXXXXXKEISASDFGSMFPDSKPWIIQLYSSGSNRCVEFSKPWNQIASLLD 194
           PLLH           K I+ASDF S+FPDSKPW+IQLYSSGSNRC EFSK WN+IASLLD
Sbjct: 137 PLLHTPSSESIDHSTKVITASDFKSIFPDSKPWLIQLYSSGSNRCAEFSKSWNKIASLLD 196

Query: 195 GVANSGVMELGEIENENDLAVFLADRSSTGKPLFRKGVPLIVAIPPGCVSAKCFSRFDGE 254
           G AN+GV+ELGE E    +A++ AD+  TGKP FR G+P + AIPPGC SAKCFSRFDGE
Sbjct: 197 GFANTGVVELGEKE----VAIYFADKRPTGKPFFRNGIPSLFAIPPGCRSAKCFSRFDGE 252

Query: 255 LTVDTVTDWFATTILALPQINYYSMGTLVPNFLGKSSHHKVKVIFFSETGDRAAPFIRQA 314
            T+D VT+WFATT+LALPQINYY+  +LV NF GKSSHHKVKVIFFS++G+RA+P+IRQ 
Sbjct: 253 PTIDAVTNWFATTVLALPQINYYTKESLVANFFGKSSHHKVKVIFFSKSGERASPYIRQV 312

Query: 315 VKDYWGYASFANILWREEDSSYWLGAFGVQSAPALVFLKDPGVKPVVHHGSVNDTLFLNM 374
            KDYW +ASFA ILWREE+SSYWLGAFGV+SAPA+VFLKDPGVKPVVHHGSV+++LFL+M
Sbjct: 313 AKDYWAHASFAFILWREEESSYWLGAFGVESAPAIVFLKDPGVKPVVHHGSVDNSLFLSM 372

Query: 375 MEDNKKQELPQLRSATSMELGCDPRGYSRAGFDTTIWYCAVAVGRPSLELNKLRETMCRV 434
           ME NK QELPQLRS TSMELGCDPRGYSRAG+DT IWYCA+AVGRPS+ELN++RET+CRV
Sbjct: 373 MEKNKDQELPQLRSVTSMELGCDPRGYSRAGYDTVIWYCAIAVGRPSVELNRMRETICRV 432

Query: 435 QEKL---------SVNQSLAPAVDALKRKRLTFAWLDGEKEKDYCRFYLGSTGSEHTCGQ 485
           Q+ L         S N+SLAP VDA KRKRLTFAWLD EK+KDYC+FYLG   SE TCGQ
Sbjct: 433 QDTLAKQSELDASSENESLAPVVDAFKRKRLTFAWLDSEKQKDYCQFYLGEGASEATCGQ 492

Query: 486 RRDMTDTPRLFVVRYMRNSSALDNRKQEMAKWKTKISLVQDLIDDSDQAGQFVAGYKGAV 545
           R+ MTD PRL V+RY+RNSSA+D R Q+++KWK+   LVQDLIDD+DQAGQFVAGYKG  
Sbjct: 493 RKGMTDIPRLLVIRYLRNSSAIDTRTQDLSKWKSL--LVQDLIDDTDQAGQFVAGYKGTA 550

Query: 546 DDVSQINEWLTNIIQYGDSRDLPFFLLSTPKLVPDDDTEAVWSKPSPVAPLKNLKQSIXX 605
           DD S+I +WL+NII+ GDSRDLPFF L TPKLVP DDTE +WSK +   PLKN+KQ I  
Sbjct: 551 DD-SEITQWLSNIIKDGDSRDLPFFTLRTPKLVP-DDTEPIWSKTAQQIPLKNIKQHILG 608

Query: 606 XXXXXXXXREDPRLVSHLLLGAMISWG 632
                    +DPR+   LLL A+IS G
Sbjct: 609 VIGGLSVYLDDPRIGPFLLLAALISLG 635