Miyakogusa Predicted Gene

Lj4g3v2375020.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2375020.1 Non Characterized Hit- tr|B9ET76|B9ET76_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,42.05,0.000001,seg,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL,CUFF.50873.1
         (339 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g118510.1 | hypothetical protein | HC | chr4:49084996-4908...   493   e-139
Medtr4g118510.2 | hypothetical protein | HC | chr4:49085126-4908...   480   e-135
Medtr4g118510.4 | hypothetical protein | HC | chr4:49084996-4908...   376   e-104
Medtr2g020820.1 | hypothetical protein | HC | chr2:6995921-69930...   375   e-104
Medtr4g118510.3 | hypothetical protein | HC | chr4:49085095-4908...   366   e-101
Medtr0260s0030.1 | hypothetical protein | HC | scaffold0260:1445...   213   2e-55
Medtr0260s0030.2 | hypothetical protein | HC | scaffold0260:1445...   121   1e-27

>Medtr4g118510.1 | hypothetical protein | HC |
           chr4:49084996-49088873 | 20130731
          Length = 344

 Score =  493 bits (1268), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 250/344 (72%), Positives = 276/344 (80%), Gaps = 5/344 (1%)

Query: 1   MAAESGDLNFDLPDDLVQVLPSDPFEQLDLARKITSIALSARVNALESESSELRARIAEK 60
           M AESG LNFDLP+D++QVLPSDPFEQLD+ARKITSIALS RV ALE ESSELRA+ AEK
Sbjct: 1   MTAESGGLNFDLPEDVMQVLPSDPFEQLDVARKITSIALSTRVKALELESSELRAKTAEK 60

Query: 61  DHLIAELQSQLDSLDATLSATADNLHRAEQDKESLINENASLSNTVRKLNRDVSKLEVFR 120
           D LIAELQSQL+SLD +LS TADNL RAEQDKE+L+ ENASLSNTVRKLNRDVSKLEVFR
Sbjct: 61  DELIAELQSQLESLDVSLSQTADNLVRAEQDKENLLKENASLSNTVRKLNRDVSKLEVFR 120

Query: 121 KTLMRSLQEEDDNSGGAPDMVAKVXXXXXXXXXXXFGDNEAXXXXXXXXXXXXXXDTGNS 180
           KTLM+SLQE++DNSGGAPD+VA++           +GDN A              D+ NS
Sbjct: 121 KTLMQSLQEDEDNSGGAPDIVARIQSQSSLTSTSQYGDNGASFQPSISSSMPHVSDSENS 180

Query: 181 FAEDHESDAIRPRVPYSLLLASQSTTPRLTPPGSPPSLSASVSPTRTSKPVSPRRHSISF 240
           +AED ESD IRPRVPY+LL+ASQ TTP +TP GSPPSLSASVSPTRTS+P+SPRRHSISF
Sbjct: 181 YAEDQESDDIRPRVPYNLLVASQRTTPLITPTGSPPSLSASVSPTRTSRPMSPRRHSISF 240

Query: 241 ATSRGMHDDRTXX-----XXXXXXXXXXXXXXXXRTRVDGKEFFRQVRNRLSYEQFGAFL 295
           +TSRG HDDR+                       RTRVDGKEFFRQVRNRLSYEQFGAFL
Sbjct: 241 STSRGTHDDRSSVFSSIGHGSISSSDSVTGSQSGRTRVDGKEFFRQVRNRLSYEQFGAFL 300

Query: 296 ANVKELNSHKQTREVTLQKADEIFGPENKDLYNIFEGLITRNVH 339
           ANVKELNSHKQTREVTLQKADEIFGPENKDLY +FEGLITRNVH
Sbjct: 301 ANVKELNSHKQTREVTLQKADEIFGPENKDLYTVFEGLITRNVH 344


>Medtr4g118510.2 | hypothetical protein | HC |
           chr4:49085126-49088800 | 20130731
          Length = 338

 Score =  480 bits (1235), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 247/344 (71%), Positives = 271/344 (78%), Gaps = 11/344 (3%)

Query: 1   MAAESGDLNFDLPDDLVQVLPSDPFEQLDLARKITSIALSARVNALESESSELRARIAEK 60
           M AESG LNFDLP+D++QVLPSDPFEQLD+ARKITSIALS RV ALE ESSELRA+ AEK
Sbjct: 1   MTAESGGLNFDLPEDVMQVLPSDPFEQLDVARKITSIALSTRVKALELESSELRAKTAEK 60

Query: 61  DHLIAELQSQLDSLDATLSATADNLHRAEQDKESLINENASLSNTVRKLNRDVSKLEVFR 120
           D LIAELQSQL+SLD +LS TADNL RAEQDK      NASLSNTVRKLNRDVSKLEVFR
Sbjct: 61  DELIAELQSQLESLDVSLSQTADNLVRAEQDK------NASLSNTVRKLNRDVSKLEVFR 114

Query: 121 KTLMRSLQEEDDNSGGAPDMVAKVXXXXXXXXXXXFGDNEAXXXXXXXXXXXXXXDTGNS 180
           KTLM+SLQE++DNSGGAPD+VA++           +GDN A              D+ NS
Sbjct: 115 KTLMQSLQEDEDNSGGAPDIVARIQSQSSLTSTSQYGDNGASFQPSISSSMPHVSDSENS 174

Query: 181 FAEDHESDAIRPRVPYSLLLASQSTTPRLTPPGSPPSLSASVSPTRTSKPVSPRRHSISF 240
           +AED ESD IRPRVPY+LL+ASQ TTP +TP GSPPSLSASVSPTRTS+P+SPRRHSISF
Sbjct: 175 YAEDQESDDIRPRVPYNLLVASQRTTPLITPTGSPPSLSASVSPTRTSRPMSPRRHSISF 234

Query: 241 ATSRGMHDDRTXX-----XXXXXXXXXXXXXXXXRTRVDGKEFFRQVRNRLSYEQFGAFL 295
           +TSRG HDDR+                       RTRVDGKEFFRQVRNRLSYEQFGAFL
Sbjct: 235 STSRGTHDDRSSVFSSIGHGSISSSDSVTGSQSGRTRVDGKEFFRQVRNRLSYEQFGAFL 294

Query: 296 ANVKELNSHKQTREVTLQKADEIFGPENKDLYNIFEGLITRNVH 339
           ANVKELNSHKQTREVTLQKADEIFGPENKDLY +FEGLITRNVH
Sbjct: 295 ANVKELNSHKQTREVTLQKADEIFGPENKDLYTVFEGLITRNVH 338


>Medtr4g118510.4 | hypothetical protein | HC |
           chr4:49084996-49088873 | 20130731
          Length = 288

 Score =  376 bits (965), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 196/288 (68%), Positives = 221/288 (76%), Gaps = 5/288 (1%)

Query: 1   MAAESGDLNFDLPDDLVQVLPSDPFEQLDLARKITSIALSARVNALESESSELRARIAEK 60
           M AESG LNFDLP+D++QVLPSDPFEQLD+ARKITSIALS RV ALE ESSELRA+ AEK
Sbjct: 1   MTAESGGLNFDLPEDVMQVLPSDPFEQLDVARKITSIALSTRVKALELESSELRAKTAEK 60

Query: 61  DHLIAELQSQLDSLDATLSATADNLHRAEQDKESLINENASLSNTVRKLNRDVSKLEVFR 120
           D LIAELQSQL+SLD +LS TADNL RAEQDKE+L+ ENASLSNTVRKLNRDVSKLEVFR
Sbjct: 61  DELIAELQSQLESLDVSLSQTADNLVRAEQDKENLLKENASLSNTVRKLNRDVSKLEVFR 120

Query: 121 KTLMRSLQEEDDNSGGAPDMVAKVXXXXXXXXXXXFGDNEAXXXXXXXXXXXXXXDTGNS 180
           KTLM+SLQE++DNSGGAPD+VA++           +GDN A              D+ NS
Sbjct: 121 KTLMQSLQEDEDNSGGAPDIVARIQSQSSLTSTSQYGDNGASFQPSISSSMPHVSDSENS 180

Query: 181 FAEDHESDAIRPRVPYSLLLASQSTTPRLTPPGSPPSLSASVSPTRTSKPVSPRRHSISF 240
           +AED ESD IRPRVPY+LL+ASQ TTP +TP GSPPSLSASVSPTRTS+P+SPRRHSISF
Sbjct: 181 YAEDQESDDIRPRVPYNLLVASQRTTPLITPTGSPPSLSASVSPTRTSRPMSPRRHSISF 240

Query: 241 ATSRGMHDDRTXX-----XXXXXXXXXXXXXXXXRTRVDGKEFFRQVR 283
           +TSRG HDDR+                       RTRVDGKEFFRQVR
Sbjct: 241 STSRGTHDDRSSVFSSIGHGSISSSDSVTGSQSGRTRVDGKEFFRQVR 288


>Medtr2g020820.1 | hypothetical protein | HC | chr2:6995921-6993040
           | 20130731
          Length = 342

 Score =  375 bits (963), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 201/349 (57%), Positives = 244/349 (69%), Gaps = 18/349 (5%)

Query: 1   MAAESGDLNFDLPDDLVQVLPSDPFEQLDLARKITSIALSARVNALESESSELRARIAEK 60
           + AE    N D+P++L+QVLPSDPFEQLD+ARKITSIALS RVN L+SE S LR  + +K
Sbjct: 2   LVAELSGSNLDIPEELLQVLPSDPFEQLDVARKITSIALSTRVNTLQSEVSALRDELVKK 61

Query: 61  DHLIAELQSQLDSLDATLSATADNLHRAEQDKESLINENASLSNTVRKLNRDVSKLEVFR 120
           D LIAEL++Q + L A LS  AD L  AEQDKE L+ ENASLS+TVRKL+RDVSKLEVFR
Sbjct: 62  DELIAELEAQGEPLHAALSEAADKLALAEQDKEKLLKENASLSSTVRKLSRDVSKLEVFR 121

Query: 121 KTLMRSLQEEDDNSGG-APDMVAKVXXXXXXXXXXXFGDNEAXXXXXXXXXXXXXXDTGN 179
           K LM+SLQE+++  G  +P++ A +            GD +A              D GN
Sbjct: 122 KALMQSLQEDEEKPGAVSPNIAAMLHSQSSTTSTSQLGDEDASLPPRPSSMQTNTSDAGN 181

Query: 180 SFAEDHESDA------IRPRV---PYSLLLASQSTTPRLTPPGSPPSLSASVSPTRTSKP 230
           S+AED +SDA      +R +     +++LLASQ+TTPR++PPGSPP +SASVSP+RTSKP
Sbjct: 182 SYAEDRQSDAGPGPGPVRSQASSSSHNILLASQTTTPRISPPGSPPIVSASVSPSRTSKP 241

Query: 231 VSPRRHSISFATSRGMHDDRTXXXXXXXXXXXXXXXXXXRTRVDGKEFFRQVRNRLSYEQ 290
            SPRRH++S    R      +                  RTRVDGKEFFRQVR+RLSYEQ
Sbjct: 242 ASPRRHAVSLQIDRTSSMFSS--------TGSMSSSGTARTRVDGKEFFRQVRSRLSYEQ 293

Query: 291 FGAFLANVKELNSHKQTREVTLQKADEIFGPENKDLYNIFEGLITRNVH 339
           FGAFLANVKELNSHKQT+E TL+KADEIFGPENKDLY IFEGLI+RNVH
Sbjct: 294 FGAFLANVKELNSHKQTKEETLKKADEIFGPENKDLYTIFEGLISRNVH 342


>Medtr4g118510.3 | hypothetical protein | HC |
           chr4:49085095-49088873 | 20130731
          Length = 283

 Score =  366 bits (939), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 194/288 (67%), Positives = 217/288 (75%), Gaps = 10/288 (3%)

Query: 1   MAAESGDLNFDLPDDLVQVLPSDPFEQLDLARKITSIALSARVNALESESSELRARIAEK 60
           M AESG LNFDLP+D++QVLPSDPFEQLD+ARKITSIALS RV ALE ESSELRA+ AEK
Sbjct: 1   MTAESGGLNFDLPEDVMQVLPSDPFEQLDVARKITSIALSTRVKALELESSELRAKTAEK 60

Query: 61  DHLIAELQSQLDSLDATLSATADNLHRAEQDKESLINENASLSNTVRKLNRDVSKLEVFR 120
           D LIAELQSQL+SLD +LS TADNL RAEQDKE     NASLSNTVRKLNRDVSKLEVFR
Sbjct: 61  DELIAELQSQLESLDVSLSQTADNLVRAEQDKE-----NASLSNTVRKLNRDVSKLEVFR 115

Query: 121 KTLMRSLQEEDDNSGGAPDMVAKVXXXXXXXXXXXFGDNEAXXXXXXXXXXXXXXDTGNS 180
           KTLM+SLQE++DNSGGAPD+VA++           +GDN A              D+ NS
Sbjct: 116 KTLMQSLQEDEDNSGGAPDIVARIQSQSSLTSTSQYGDNGASFQPSISSSMPHVSDSENS 175

Query: 181 FAEDHESDAIRPRVPYSLLLASQSTTPRLTPPGSPPSLSASVSPTRTSKPVSPRRHSISF 240
           +AED ESD IRPRVPY+LL+ASQ TTP +TP GSPPSLSASVSPTRTS+P+SPRRHSISF
Sbjct: 176 YAEDQESDDIRPRVPYNLLVASQRTTPLITPTGSPPSLSASVSPTRTSRPMSPRRHSISF 235

Query: 241 ATSRGMHDDRTXX-----XXXXXXXXXXXXXXXXRTRVDGKEFFRQVR 283
           +TSRG HDDR+                       RTRVDGKEFFRQVR
Sbjct: 236 STSRGTHDDRSSVFSSIGHGSISSSDSVTGSQSGRTRVDGKEFFRQVR 283


>Medtr0260s0030.1 | hypothetical protein | HC |
           scaffold0260:14453-21136 | 20130731
          Length = 342

 Score =  213 bits (543), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/337 (40%), Positives = 184/337 (54%), Gaps = 22/337 (6%)

Query: 8   LNFDLPDDLVQVLPSDPFEQLDLARKITSIALSARVNALESESSELRARIAEKDHLIAEL 67
           ++FDLPD+++ V+P+DP+ QLDLARKITS+A+++RV++LES++  LR ++ EKD +I EL
Sbjct: 21  VDFDLPDEILAVIPTDPYHQLDLARKITSMAIASRVSSLESDTGRLRQKLLEKDRVINEL 80

Query: 68  QSQLDSLDATLSATADNLHRAEQDKESLINENASLSNTVRKLNRDVSKLEVFRKTLMRSL 127
           + ++ +L          L+ A ++   L  E   L+ TV+KL+RD +KLE F+K LMRSL
Sbjct: 81  EDRVSTLTRASQQAHSALNNAVEENVKLTKERDELAATVKKLSRDFAKLETFKKQLMRSL 140

Query: 128 QEEDDNSGGAPDMVAKVXXXXXXXXXXXFGDNEAXXXXXXXXXXXXXXDTGNSFAEDHES 187
              DDN   A  +  +             G                  D G +  E    
Sbjct: 141 --ADDNPPQAETIDIRTCDQAVPKDDDVNG-------YTTHNSYRGSADVGKTIDE---- 187

Query: 188 DAIRPRVPYSLLLASQSTTPRLTP------PGSPPSLSASVSPTRTSKPVSPRRHSISFA 241
               PR        +   TPRLTP       GSP   SA+VSP +TS   SP + S    
Sbjct: 188 ---APRYSGQKFSLTPYITPRLTPTATPKTAGSPRGYSAAVSPNQTSGATSPSKVSYDGR 244

Query: 242 TSRGMHDDRTXXXXXXXXXXXXXXXXXXRTRVDGKEFFRQVRNRLSYEQFGAFLANVKEL 301
           +S       +                    ++DGKEFFRQ R+RLSYEQF AFLAN+KEL
Sbjct: 245 SSLSSWYPSSQQSSAANSPPRGRSIPGRTPKIDGKEFFRQARSRLSYEQFSAFLANIKEL 304

Query: 302 NSHKQTREVTLQKADEIFGPENKDLYNIFEGLITRNV 338
           N+ KQTRE TL+KADEIFG +NKDLY  F+GL+ RNV
Sbjct: 305 NAQKQTREETLRKADEIFGSDNKDLYLSFQGLLNRNV 341


>Medtr0260s0030.2 | hypothetical protein | HC |
           scaffold0260:14453-18997 | 20130731
          Length = 272

 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/236 (35%), Positives = 122/236 (51%), Gaps = 22/236 (9%)

Query: 8   LNFDLPDDLVQVLPSDPFEQLDLARKITSIALSARVNALESESSELRARIAEKDHLIAEL 67
           ++FDLPD+++ V+P+DP+ QLDLARKITS+A+++RV++LES++  LR ++ EKD +I EL
Sbjct: 21  VDFDLPDEILAVIPTDPYHQLDLARKITSMAIASRVSSLESDTGRLRQKLLEKDRVINEL 80

Query: 68  QSQLDSLDATLSATADNLHRAEQDKESLINENASLSNTVRKLNRDVSKLEVFRKTLMRSL 127
           + ++ +L          L+ A ++   L  E   L+ TV+KL+RD +KLE F+K LMRSL
Sbjct: 81  EDRVSTLTRASQQAHSALNNAVEENVKLTKERDELAATVKKLSRDFAKLETFKKQLMRSL 140

Query: 128 QEEDDNSGGAPDMVAKVXXXXXXXXXXXFGDNEAXXXXXXXXXXXXXXDTGNSFAEDHES 187
              DDN   A  +  +             G                  D G +  E    
Sbjct: 141 --ADDNPPQAETIDIRTCDQAVPKDDDVNG-------YTTHNSYRGSADVGKTIDE---- 187

Query: 188 DAIRPRVPYSLLLASQSTTPRLTP------PGSPPSLSASVSPTRTSKPVSPRRHS 237
               PR        +   TPRLTP       GSP   SA+VSP +TS   SP + S
Sbjct: 188 ---APRYSGQKFSLTPYITPRLTPTATPKTAGSPRGYSAAVSPNQTSGATSPSKVS 240