Miyakogusa Predicted Gene

Lj4g3v2374890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2374890.1 Non Characterized Hit- tr|I1LDI3|I1LDI3_SOYBN
Uncharacterized protein OS=Glycine max PE=3
SV=1,69.35,2e-17,Concanavalin A-like lectins/glucanases,Concanavalin
A-like lectin/glucanases superfamily; seg,NULL; ,CUFF.50861.1
         (155 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g099260.1 | lectin receptor kinase | HC | chr1:44798455-44...    52   2e-07

>Medtr1g099260.1 | lectin receptor kinase | HC |
           chr1:44798455-44800500 | 20130731
          Length = 666

 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 63/146 (43%), Gaps = 19/146 (13%)

Query: 8   RAFYAHSVRFLYPFTNXXXXXXXXXX-XXXXXXXXXXXXDGIAFVIAANTYFPSLSHGYM 66
           RAFY + VRFL P TN                       DGIAF+I++ T F SLS+GYM
Sbjct: 64  RAFYLYPVRFLDPLTNSTASFSCRFSFSILSSPSCPSSSDGIAFLISSTTDFSSLSNGYM 123

Query: 67  GLPGPVLNHKDSYFA-------DPDVVFTNWGGGGADPGGTLHISEKRL--KLGDRFMGF 117
           GLP    + +DSYFA       DP +   N    G D G  +  +   L  +  D   G 
Sbjct: 124 GLPH---SDQDSYFAVEFDTSFDPSLGDINGNHVGIDLGSVVSFASADLLSRRIDLKSGK 180

Query: 118 SLDGGVEVGEH------WVSLSHHNP 137
            ++  +E  +       WVS S   P
Sbjct: 181 IINAWIEYRDDMKMVRVWVSYSSTRP 206