Miyakogusa Predicted Gene

Lj4g3v2373760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2373760.1 tr|G7JJ22|G7JJ22_MEDTR Helicase swr1 OS=Medicago
truncatula GN=MTR_4g118720 PE=4 SV=1,74.5,0,coiled-coil,NULL; no
description,Glutamine-Leucine-Glutamine, QLQ; seg,NULL;
HSA,Helicase/SANT-assoc,CUFF.50853.1
         (933 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g118720.1 | SNF2 family amine-terminal protein | HC | chr4...  1279   0.0  

>Medtr4g118720.1 | SNF2 family amine-terminal protein | HC |
           chr4:49190490-49169826 | 20130731
          Length = 3282

 Score = 1279 bits (3310), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 656/949 (69%), Positives = 728/949 (76%), Gaps = 24/949 (2%)

Query: 1   MVSLNNVELEAANFLHKLIQDSKDEPAKLATKLHVILQHMKSSGKENSMPYQVISRAMET 60
           M S  NVELEAA FLHKLIQDSKDEP KLATKL+VILQHMKSSGKE+SMPYQVISRAMET
Sbjct: 18  MASPQNVELEAAKFLHKLIQDSKDEPVKLATKLYVILQHMKSSGKEHSMPYQVISRAMET 77

Query: 61  VISQHGLDIEALKPSRLPLTGGPLIGSSSSQTVGRTKDSRVGLAENEASKMDPFTSGRPP 120
           VI+QHGLDIEALK SRLPLTG P IGSSS Q VG  KDSR  LAE+EA KM+PFTSGRPP
Sbjct: 78  VINQHGLDIEALKSSRLPLTGVPQIGSSS-QAVGGAKDSRPSLAESEAPKMEPFTSGRPP 136

Query: 121 IAPTGGAPDYYQGSVAQKXXXXXXXXXXXXLDSRSANSQSQDRRDTANWDKQQVNQKDXX 180
           IAPTGGAPDYYQGSVAQ+            LDSRSANS SQD+RDT  WDKQ  NQKD  
Sbjct: 137 IAPTGGAPDYYQGSVAQRSNQSFDQESPSSLDSRSANSLSQDKRDTVIWDKQ-ANQKDGK 195

Query: 181 XXXXXXXXXXXSSPVELHADSSS---PGNTGVNARRGRKTKAEPSDGLSAKSDELTNFNL 237
                      +SPVE+H DSSS   P NTGVN R+G+ TK EPSDG+ AKS E+TNF++
Sbjct: 196 KGNTKRKRGDSTSPVEMHVDSSSLVEPRNTGVNTRKGKMTKTEPSDGIPAKSGEMTNFSV 255

Query: 238 VSTSSQVQNISTFSGNMRKMPRANQEGHHLLAKQIDLTKIGNPMVRAPNSKYPEDTEVSS 297
           V  +SQ++NISTFSGNM+ M RAN EGHHLLAKQ D T IGNP  RAPNSKYPED EVSS
Sbjct: 256 VPNNSQMENISTFSGNMKTMLRANPEGHHLLAKQTDSTNIGNPTGRAPNSKYPEDLEVSS 315

Query: 298 AHIAPGKQKGAYAKFHGGMAVPAGVSPMAEPVFSNS------------SSTTLADGHKIA 345
           AHIAPGKQ+GAYA+ HGGM VPA VS M EPVFS+S            SS TLADGH+I+
Sbjct: 316 AHIAPGKQQGAYARVHGGMVVPANVSAMNEPVFSSSMQYGVPLNRDGGSSNTLADGHQIS 375

Query: 346 QIAKQNSGSEMTMLRQGAPSRDTGKSTYPAPPGSSVKPFNEQQLKQLRAQCLVFLAIRNG 405
           QI +QNSGSEMTMLRQG P RDTGKS  P P  SS  PF E QLKQLRAQCLVFLA RNG
Sbjct: 376 QIGRQNSGSEMTMLRQGVPPRDTGKS--PVPAASSTMPFKENQLKQLRAQCLVFLAFRNG 433

Query: 406 LAPKKLHLEIALGATFSREDSSRKDLIDHKGKSQSFNEPVNTSGVMMPFGGLSNVRQTDK 465
           L PKKLHLE+A G  F+RED S KD  D KGKSQSF+EP N  GV+MPFG  SN+R TDK
Sbjct: 434 LPPKKLHLEVAFGTFFAREDGSNKDSNDPKGKSQSFSEPGNMPGVIMPFGSSSNLRPTDK 493

Query: 466 NPFGSSSAGKFLEADSLSTGTESPRMLEDTGNLNSDIHMNSQERKHLLATKIGELERVQE 525
           NP GSS AGKFLEA+S   GT+  R+LED GNL+SDI   S++ KHL A +  E  R+QE
Sbjct: 494 NPSGSS-AGKFLEAESFMKGTDGTRLLEDKGNLHSDIQTPSEDSKHLAAKRDVE-RRIQE 551

Query: 526 RVVA--SSAISCQQQDSLSTRGTVAGNNHLDEVGNANMQVGRSNQPSIVGSNSWTGFTGH 583
           RV A  SSA   QQ+DS S+RG V GN++LD+  N  +  GR+NQPS+VG N+WTGF G 
Sbjct: 552 RVAAQSSSATPYQQKDSSSSRGIVVGNSNLDDSDNGILTAGRANQPSVVGPNNWTGFAGP 611

Query: 584 NEASKGPPQIPTIQHELPTERRENIPSPFQNVGNSCGSLNHNSVNHLASYSLKEHWKLVP 643
           +EASKGPPQ+ T QHELP ERRENIP+ FQ+V NS GS N NSVNHL SYSLKEHWK VP
Sbjct: 612 SEASKGPPQVSTSQHELPIERRENIPTHFQSVVNSRGSWNPNSVNHLTSYSLKEHWKPVP 671

Query: 644 ETDRDPHGATVMKDGNAMTKNVSSDQEGNEILVSSDLSSSKKYTMSERWIMDQQRKRLLV 703
             D + HG     +GN + KNVS++Q GN+ L S+DL S KK+TMSERWIMDQQ+KRLLV
Sbjct: 672 GIDSNHHGGVTTMNGNVLGKNVSAEQGGNDKLASADLPS-KKFTMSERWIMDQQKKRLLV 730

Query: 704 EQNWVQKHQKTKERMTTCFHKLKENVSSSEDISAKTKSVIXXXXXXXXXXXXXXRSDFLN 763
           +QNW+QK QK KERMTTCFHKLKENVSS EDISAKTKSVI              RSDFLN
Sbjct: 731 QQNWMQKQQKAKERMTTCFHKLKENVSSCEDISAKTKSVIELKKLQLLDLQRRLRSDFLN 790

Query: 764 DFFKPITTEMEHLKSIKKHRHGRRVKQLXXXXXXXXXXXXXXXXXXXXXFFSEIEVHKEK 823
           DFFKP+T+E+EHLKS KK+RHGRRVKQL                     FF+EIEVHKEK
Sbjct: 791 DFFKPVTSELEHLKSFKKNRHGRRVKQLERYELKMKEERQKRIRERQKEFFTEIEVHKEK 850

Query: 824 LDDVFKIKKERWKGFNRYVKEFHKRKERIHREKVDRIQREKINLLKINDVEGYLRMVQDA 883
           LDDVFKIK+ERWKG NRYVKEFHKRKERIHREK+DRIQREKINLLKINDVEGYLRMVQDA
Sbjct: 851 LDDVFKIKRERWKGVNRYVKEFHKRKERIHREKIDRIQREKINLLKINDVEGYLRMVQDA 910

Query: 884 KSDRVKQLLKETEKYLQKLGSKLQAAKAAAGRFGHDIDETGSRSFLDNS 932
           KSDRVKQLLK TEKYLQKLGSKLQ AKAAA R G D+DE GS +FL+NS
Sbjct: 911 KSDRVKQLLKATEKYLQKLGSKLQEAKAAAERSGQDVDEGGSTNFLENS 959