Miyakogusa Predicted Gene

Lj4g3v2336850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2336850.1 Non Characterized Hit- tr|I1L0B0|I1L0B0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18295
PE,69.35,2e-19,SNARE-like,Longin-like domain; VAMP-7,NULL; SNARE
PROTEINS,NULL; LONGIN,Longin domain; Longin,Longin,CUFF.50790.1
         (77 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g436870.1 | synaptobrevin-like protein | HC | chr2:1440722...   129   4e-31
Medtr1g047720.1 | synaptobrevin-like protein | HC | chr1:1804372...   108   1e-24
Medtr7g058900.1 | synaptobrevin-like protein | HC | chr7:2123807...   108   1e-24
Medtr4g022570.1 | synaptobrevin-like protein | HC | chr4:7537988...   101   2e-22
Medtr4g083490.1 | synaptobrevin-like protein | HC | chr4:3261613...    99   1e-21
Medtr2g028790.1 | synaptobrevin-like protein | HC | chr2:1069094...    98   2e-21
Medtr1g111890.1 | synaptobrevin-like protein | HC | chr1:5059669...    91   3e-19
Medtr7g058640.1 | synaptobrevin-like protein | HC | chr7:2121475...    90   5e-19
Medtr7g058640.2 | synaptobrevin-like protein | HC | chr7:2121475...    89   8e-19
Medtr4g052550.1 | synaptobrevin-like protein | HC | chr4:1906845...    52   1e-07

>Medtr2g436870.1 | synaptobrevin-like protein | HC |
          chr2:14407228-14411283 | 20130731
          Length = 221

 Score =  129 bits (325), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 60/75 (80%), Positives = 66/75 (88%), Gaps = 6/75 (8%)

Query: 1  MSQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVE 60
          MSQESFIYSFVARGTMVLAEYTEFTGNFPAIA+QCLQKL SSNNKFTY+CDHHTFNFLVE
Sbjct: 1  MSQESFIYSFVARGTMVLAEYTEFTGNFPAIAAQCLQKLPSSNNKFTYSCDHHTFNFLVE 60

Query: 61 DAPISISFYLFCILS 75
          D       Y +C+++
Sbjct: 61 DG------YAYCVVA 69


>Medtr1g047720.1 | synaptobrevin-like protein | HC |
          chr1:18043724-18041195 | 20130731
          Length = 221

 Score =  108 bits (270), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 48/76 (63%), Positives = 61/76 (80%), Gaps = 6/76 (7%)

Query: 1  MSQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVE 60
          M Q++ IYSFVARGTM+LAEYTEF+GNF  IASQCLQKL SSNN+FTYNCD HTFN+LV+
Sbjct: 1  MGQQTLIYSFVARGTMILAEYTEFSGNFSTIASQCLQKLPSSNNRFTYNCDGHTFNYLVD 60

Query: 61 DAPISISFYLFCILST 76
          +       + +C+++ 
Sbjct: 61 NG------FTYCVVAV 70


>Medtr7g058900.1 | synaptobrevin-like protein | HC |
          chr7:21238076-21241305 | 20130731
          Length = 221

 Score =  108 bits (269), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 49/75 (65%), Positives = 61/75 (81%), Gaps = 6/75 (8%)

Query: 1  MSQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVE 60
          M Q+S IYSFVARGT++LAEYTEFTGNF A+A+QCLQKL SSNNKF YNCD HTFN+LV+
Sbjct: 1  MGQQSLIYSFVARGTVILAEYTEFTGNFTAVAAQCLQKLPSSNNKFNYNCDDHTFNYLVD 60

Query: 61 DAPISISFYLFCILS 75
                S + +C+++
Sbjct: 61 ------SGFTYCVVA 69


>Medtr4g022570.1 | synaptobrevin-like protein | HC |
          chr4:7537988-7532569 | 20130731
          Length = 219

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 45/75 (60%), Positives = 60/75 (80%), Gaps = 6/75 (8%)

Query: 1  MSQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVE 60
          M Q+S IYSFVARGT++LAEY++FTGNF  IA QCLQKL +SNN+FTYNCD HTF+FLV+
Sbjct: 1  MGQQSLIYSFVARGTVILAEYSDFTGNFTTIALQCLQKLPASNNRFTYNCDGHTFSFLVD 60

Query: 61 DAPISISFYLFCILS 75
          +       + +C+++
Sbjct: 61 NG------FTYCVVA 69


>Medtr4g083490.1 | synaptobrevin-like protein | HC |
          chr4:32616135-32610150 | 20130731
          Length = 220

 Score = 98.6 bits (244), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 43/74 (58%), Positives = 61/74 (82%), Gaps = 6/74 (8%)

Query: 2  SQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVED 61
          +Q+S IY+FV+RG+++L+EYTEF+GNF +IA QCLQKL +SNNKFTYNCD HTFN+LV++
Sbjct: 4  NQKSLIYAFVSRGSVILSEYTEFSGNFNSIAFQCLQKLPASNNKFTYNCDGHTFNYLVDN 63

Query: 62 APISISFYLFCILS 75
                 Y +C+++
Sbjct: 64 G------YTYCVVA 71


>Medtr2g028790.1 | synaptobrevin-like protein | HC |
          chr2:10690943-10695600 | 20130731
          Length = 220

 Score = 97.8 bits (242), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 42/74 (56%), Positives = 61/74 (82%), Gaps = 6/74 (8%)

Query: 2  SQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVED 61
          +Q+  IY+FV+RGT++LAE+TEF+GNF +IA QCLQKL S+NNKFTYNCD+HTFN+L+++
Sbjct: 6  NQKQLIYAFVSRGTVILAEFTEFSGNFNSIAFQCLQKLPSTNNKFTYNCDNHTFNYLIDN 65

Query: 62 APISISFYLFCILS 75
                 Y +C+++
Sbjct: 66 G------YTYCVVA 73


>Medtr1g111890.1 | synaptobrevin-like protein | HC |
          chr1:50596698-50600474 | 20130731
          Length = 238

 Score = 90.9 bits (224), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 51/62 (82%)

Query: 1  MSQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVE 60
          MSQ   IYSFVA+GT+VLAE+T++TGNF  IA QCL KL S++ K+TY+CD HTFNFL++
Sbjct: 1  MSQRGLIYSFVAKGTVVLAEHTQYTGNFSTIAVQCLNKLPSNSTKYTYSCDGHTFNFLLD 60

Query: 61 DA 62
          + 
Sbjct: 61 NG 62


>Medtr7g058640.1 | synaptobrevin-like protein | HC |
          chr7:21214758-21216356 | 20130731
          Length = 214

 Score = 89.7 bits (221), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 41/75 (54%), Positives = 53/75 (70%), Gaps = 6/75 (8%)

Query: 1  MSQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVE 60
          M Q+S IYSFVARG ++LAE+T FTGNF  IA QCLQ+L ++N KFTYN D HTFN+L  
Sbjct: 1  MVQQSLIYSFVARGMVILAEHTNFTGNFVEIALQCLQRLPATNTKFTYNTDGHTFNYLAH 60

Query: 61 DAPISISFYLFCILS 75
          D       + +C++ 
Sbjct: 61 DG------FTYCVVG 69


>Medtr7g058640.2 | synaptobrevin-like protein | HC |
          chr7:21214758-21216282 | 20130731
          Length = 194

 Score = 89.4 bits (220), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 40/62 (64%), Positives = 48/62 (77%)

Query: 1  MSQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVE 60
          M Q+S IYSFVARG ++LAE+T FTGNF  IA QCLQ+L ++N KFTYN D HTFN+L  
Sbjct: 1  MVQQSLIYSFVARGMVILAEHTNFTGNFVEIALQCLQRLPATNTKFTYNTDGHTFNYLAH 60

Query: 61 DA 62
          D 
Sbjct: 61 DG 62


>Medtr4g052550.1 | synaptobrevin-like protein | HC |
          chr4:19068456-19063628 | 20130731
          Length = 220

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 40/59 (67%), Gaps = 1/59 (1%)

Query: 5  SFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKL-TSSNNKFTYNCDHHTFNFLVEDA 62
          + +Y+ VARGT+VLAE++  TGN  A+A + L+KL T S+++  ++ D + F+ L  D 
Sbjct: 2  AILYALVARGTVVLAEFSAVTGNTGAVARRLLEKLPTESDSRLCFSQDRYIFHILRSDG 60