Miyakogusa Predicted Gene

Lj4g3v2312410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2312410.1 Non Characterized Hit- tr|K3ZUZ9|K3ZUZ9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si030430,56.25,0.000000000000001,seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; Myb_DNA-bind_4,NULL,CUFF.50754.1
         (138 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g014280.1 | transcription factor | HC | chr3:4028479-40314...   141   2e-34
Medtr1g037650.1 | Myb/SANT-like DNA-binding domain protein | HC ...   140   3e-34
Medtr1g061600.1 | aspartate/glutamate/uridylate kinase family pr...    70   5e-13
Medtr8g022290.1 | transcription factor | HC | chr8:7894420-78924...    59   2e-09
Medtr4g117990.1 | transcription factor | HC | chr4:48969471-4897...    55   2e-08
Medtr2g016140.1 | transcription factor | HC | chr2:4875032-48740...    55   2e-08
Medtr2g016140.2 | transcription factor | HC | chr2:4875032-48709...    55   2e-08
Medtr4g079960.1 | sequence-specific DNA-binding transcription fa...    54   5e-08
Medtr4g079960.2 | sequence-specific DNA-binding transcription fa...    54   6e-08
Medtr4g079960.3 | sequence-specific DNA-binding transcription fa...    54   7e-08
Medtr5g017500.1 | Myb/SANT-like DNA-binding domain protein | HC ...    47   5e-06
Medtr7g081190.1 | Myb/SANT-like DNA-binding domain protein | HC ...    46   8e-06

>Medtr3g014280.1 | transcription factor | HC | chr3:4028479-4031484
           | 20130731
          Length = 325

 Score =  141 bits (356), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 70/91 (76%), Positives = 77/91 (84%), Gaps = 1/91 (1%)

Query: 24  ITAKEESPRKAIXXXXXXXXXDRLKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEE 83
           I   +ESPRK +         +RLKRDEWSEGAV TLLEAYE+KWVLRNRAKLKGQDWE+
Sbjct: 11  IQQNQESPRK-LQNNIIGSGNERLKRDEWSEGAVTTLLEAYESKWVLRNRAKLKGQDWED 69

Query: 84  VAKHVSSRANNTKSPKTQTQCKNKIESMKKR 114
           VAKHVSSR+N+TKSPKTQTQCKNKIESMKKR
Sbjct: 70  VAKHVSSRSNSTKSPKTQTQCKNKIESMKKR 100


>Medtr1g037650.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr1:13960642-13959736 | 20130731
          Length = 189

 Score =  140 bits (354), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 70/91 (76%), Positives = 77/91 (84%), Gaps = 1/91 (1%)

Query: 24  ITAKEESPRKAIXXXXXXXXXDRLKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEE 83
           I   +ESPRK +         +RLKRDEWSEGAV TLLEAYE+KWVLRNRAKLKGQDWE+
Sbjct: 11  IQQNQESPRK-LQNNIIGSGNERLKRDEWSEGAVTTLLEAYESKWVLRNRAKLKGQDWED 69

Query: 84  VAKHVSSRANNTKSPKTQTQCKNKIESMKKR 114
           VAKHVSSR+N+TKSPKTQTQCKNKIESMKKR
Sbjct: 70  VAKHVSSRSNSTKSPKTQTQCKNKIESMKKR 100


>Medtr1g061600.1 | aspartate/glutamate/uridylate kinase family
           protein, putative | HC | chr1:26896287-26891384 |
           20130731
          Length = 512

 Score = 70.5 bits (171), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 2/69 (2%)

Query: 46  RLKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCK 105
           R  R+EWS+ A+  LLEAY  K+   NR  L+G+DWEEVA  VS R  N    K+  QCK
Sbjct: 127 RKDREEWSDTAIVCLLEAYTEKFTQLNRGNLRGRDWEEVASMVSERCEN--QSKSVEQCK 184

Query: 106 NKIESMKKR 114
           NK++++KKR
Sbjct: 185 NKVDNLKKR 193


>Medtr8g022290.1 | transcription factor | HC | chr8:7894420-7892470
           | 20130731
          Length = 371

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 43/64 (67%)

Query: 48  KRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCKNK 107
           + D WSE A   L+EA+  +++  +R  LK + W+EVA+ V+ R +  K+PKT  QCKN+
Sbjct: 64  REDCWSEAATAVLIEAWGERYLELSRGNLKQKHWKEVAEIVNGRGDYLKAPKTDVQCKNR 123

Query: 108 IESM 111
           I+++
Sbjct: 124 IDTV 127


>Medtr4g117990.1 | transcription factor | HC |
           chr4:48969471-48970716 | 20130731
          Length = 340

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 37/69 (53%)

Query: 46  RLKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCK 105
           RL    WS      L+++Y  KW    R  LK   W+EVA  VS+R  N    KT  QC+
Sbjct: 38  RLPPPCWSPEETLALIDSYREKWYSLGRGNLKATHWQEVADSVSNRCPNVTPAKTPVQCR 97

Query: 106 NKIESMKKR 114
           +K+E ++KR
Sbjct: 98  HKMEKLRKR 106


>Medtr2g016140.1 | transcription factor | HC | chr2:4875032-4874034
           | 20130731
          Length = 332

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 49/72 (68%), Gaps = 1/72 (1%)

Query: 47  LKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNT-KSPKTQTQCK 105
           ++ D WSE A  TL++A+  +++  NR  L+ +DW++VA  V++   +T K+ +T  QCK
Sbjct: 18  VREDCWSEDASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCK 77

Query: 106 NKIESMKKRTCV 117
           N+I+++KK+  V
Sbjct: 78  NRIDTIKKKYKV 89


>Medtr2g016140.2 | transcription factor | HC | chr2:4875032-4870933
           | 20130731
          Length = 317

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 27/72 (37%), Positives = 49/72 (68%), Gaps = 1/72 (1%)

Query: 47  LKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNT-KSPKTQTQCK 105
           ++ D WSE A  TL++A+  +++  NR  L+ +DW++VA  V++   +T K+ +T  QCK
Sbjct: 18  VREDCWSEDASSTLVDAWGRRYLELNRGNLRQKDWQDVADAVNALHGHTKKTHRTDVQCK 77

Query: 106 NKIESMKKRTCV 117
           N+I+++KK+  V
Sbjct: 78  NRIDTIKKKYKV 89


>Medtr4g079960.1 | sequence-specific DNA-binding transcription
           factors protein, putative | HC | chr4:30958199-30957118
           | 20130731
          Length = 313

 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 48  KRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSR--ANNTKSPKTQTQCK 105
           + D W+E A  TL++A+  +++  NR  L+ + W+EVA  V+    A N K+ +T  QCK
Sbjct: 27  REDCWTEDATSTLIDAWGERYLDLNRGNLRQKTWQEVADAVNDFHAAGNRKARRTDVQCK 86

Query: 106 NKIESMKKR 114
           N+I+++KK+
Sbjct: 87  NRIDTLKKK 95


>Medtr4g079960.2 | sequence-specific DNA-binding transcription
           factors protein, putative | HC | chr4:30958270-30954949
           | 20130731
          Length = 304

 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 48  KRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSR--ANNTKSPKTQTQCK 105
           + D W+E A  TL++A+  +++  NR  L+ + W+EVA  V+    A N K+ +T  QCK
Sbjct: 27  REDCWTEDATSTLIDAWGERYLDLNRGNLRQKTWQEVADAVNDFHAAGNRKARRTDVQCK 86

Query: 106 NKIESMKKR 114
           N+I+++KK+
Sbjct: 87  NRIDTLKKK 95


>Medtr4g079960.3 | sequence-specific DNA-binding transcription
           factors protein, putative | HC | chr4:30958242-30955342
           | 20130731
          Length = 315

 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 48  KRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSR--ANNTKSPKTQTQCK 105
           + D W+E A  TL++A+  +++  NR  L+ + W+EVA  V+    A N K+ +T  QCK
Sbjct: 27  REDCWTEDATSTLIDAWGERYLDLNRGNLRQKTWQEVADAVNDFHAAGNRKARRTDVQCK 86

Query: 106 NKIESMKKR 114
           N+I+++KK+
Sbjct: 87  NRIDTLKKK 95


>Medtr5g017500.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr5:6397265-6398575 | 20130731
          Length = 229

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 2/65 (3%)

Query: 52  WSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSR-ANNTKSP-KTQTQCKNKIE 109
           W+      L+ AY+ KW    R  L+G  WEEVA  V++R   +   P KT  QC++K+E
Sbjct: 22  WTHQETINLIRAYQDKWYSLKRGPLRGSQWEEVAVVVAARCGYDYNHPSKTALQCRHKME 81

Query: 110 SMKKR 114
            +++R
Sbjct: 82  KLRQR 86


>Medtr7g081190.1 | Myb/SANT-like DNA-binding domain protein | HC |
           chr7:30965503-30963216 | 20130731
          Length = 388

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)

Query: 52  WSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSP--KTQTQCKNKIE 109
           W+      L+++Y  KW    R  LK   W+EVA  V+ R  N+ SP  KT  QC++K+E
Sbjct: 46  WTPEETSALIDSYRDKWYSLGRTNLKATHWQEVADAVAVRCPNS-SPVAKTAVQCRHKME 104

Query: 110 SMKKR 114
            ++KR
Sbjct: 105 KLRKR 109