Miyakogusa Predicted Gene
- Lj4g3v2298200.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2298200.1 Non Characterized Hit- tr|B9RCW6|B9RCW6_RICCO
Heparanase, putative OS=Ricinus communis
GN=RCOM_16216,42.17,0.00000001,seg,NULL; Glyco_hydro_79n,Glycoside
hydrolase, family 79; HEPARANASE-RELATED,NULL;
HEPARANASE-RELATE,GO034433.path1.1
(157 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g451510.1 | glycoside hydrolase family 79 amine-terminal d... 242 8e-65
Medtr2g451510.2 | glycoside hydrolase family 79 amine-terminal d... 242 8e-65
Medtr4g116070.1 | glycoside hydrolase family 79 amine-terminal d... 212 1e-55
Medtr4g109300.2 | glycoside hydrolase family 79 amine-terminal d... 159 1e-39
Medtr4g109300.1 | glycoside hydrolase family 79 amine-terminal d... 159 1e-39
Medtr5g043710.1 | glycoside hydrolase family 79 amine-terminal d... 159 1e-39
Medtr3g023700.1 | glycoside hydrolase family 79 amine-terminal d... 157 3e-39
Medtr3g023710.1 | glycoside hydrolase family 79 amine-terminal d... 150 4e-37
Medtr3g023690.1 | glycoside hydrolase family 79 amine-terminal d... 148 2e-36
Medtr4g109300.3 | glycoside hydrolase family 79 amine-terminal d... 146 7e-36
Medtr4g116050.1 | glycoside hydrolase family 79 amine-terminal d... 74 7e-14
>Medtr2g451510.1 | glycoside hydrolase family 79 amine-terminal
domain protein | HC | chr2:22880254-22875548 | 20130731
Length = 537
Score = 242 bits (618), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 114/146 (78%), Positives = 125/146 (85%), Gaps = 9/146 (6%)
Query: 20 VNTLSE---------KGTVTIDGKSAIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLL 70
VNT+S+ KG V IDG S IGNIDDDF+CATLDWWPP+KCDYG CSWGLASLL
Sbjct: 21 VNTVSDESGYDEDVKKGNVVIDGSSVIGNIDDDFICATLDWWPPQKCDYGTCSWGLASLL 80
Query: 71 NLDLNNKIFLNAVKAFSPLKLRLGGSLQDKVNYGTEDYHRPCTPFVRKQSEMFGFTEGCL 130
NLDLNNKIFLNAVKAFSPLKLRLGGSLQD + YGT+DY++PCTPFVR SEMFGF++GCL
Sbjct: 81 NLDLNNKIFLNAVKAFSPLKLRLGGSLQDLLVYGTDDYNKPCTPFVRNASEMFGFSQGCL 140
Query: 131 PMNRWDELNKFFAKSGAKIIFGLNAL 156
PM RWDELN FF K+GAKIIFGLNAL
Sbjct: 141 PMPRWDELNHFFQKAGAKIIFGLNAL 166
>Medtr2g451510.2 | glycoside hydrolase family 79 amine-terminal
domain protein | HC | chr2:22880254-22875491 | 20130731
Length = 537
Score = 242 bits (618), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 114/146 (78%), Positives = 125/146 (85%), Gaps = 9/146 (6%)
Query: 20 VNTLSE---------KGTVTIDGKSAIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLL 70
VNT+S+ KG V IDG S IGNIDDDF+CATLDWWPP+KCDYG CSWGLASLL
Sbjct: 21 VNTVSDESGYDEDVKKGNVVIDGSSVIGNIDDDFICATLDWWPPQKCDYGTCSWGLASLL 80
Query: 71 NLDLNNKIFLNAVKAFSPLKLRLGGSLQDKVNYGTEDYHRPCTPFVRKQSEMFGFTEGCL 130
NLDLNNKIFLNAVKAFSPLKLRLGGSLQD + YGT+DY++PCTPFVR SEMFGF++GCL
Sbjct: 81 NLDLNNKIFLNAVKAFSPLKLRLGGSLQDLLVYGTDDYNKPCTPFVRNASEMFGFSQGCL 140
Query: 131 PMNRWDELNKFFAKSGAKIIFGLNAL 156
PM RWDELN FF K+GAKIIFGLNAL
Sbjct: 141 PMPRWDELNHFFQKAGAKIIFGLNAL 166
>Medtr4g116070.1 | glycoside hydrolase family 79 amine-terminal
domain protein | HC | chr4:47992164-47988786 | 20130731
Length = 529
Score = 212 bits (540), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/139 (71%), Positives = 112/139 (80%), Gaps = 2/139 (1%)
Query: 21 NTLSEKGTVTIDGKSAIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFL 80
N + KG V I GK+ IG ID+DFVCATLDWWPP+KCD+GRCSWG ASLLNLDLNNKI L
Sbjct: 33 NDSAVKGVVVIHGKAFIGRIDNDFVCATLDWWPPQKCDWGRCSWGHASLLNLDLNNKILL 92
Query: 81 NAVKAFSPLKLRLGGSLQDKVNYGTEDYHRPCTPFVRKQSEM--FGFTEGCLPMNRWDEL 138
NA+KAFSPLK+RLGG+LQD V YGTED + CTPF E FGFT+GCLPM RWDEL
Sbjct: 93 NAIKAFSPLKIRLGGTLQDMVIYGTEDNKQSCTPFALSSKEKIDFGFTKGCLPMQRWDEL 152
Query: 139 NKFFAKSGAKIIFGLNALA 157
N FF K+G K+IFGLNALA
Sbjct: 153 NSFFQKAGVKVIFGLNALA 171
>Medtr4g109300.2 | glycoside hydrolase family 79 amine-terminal
domain protein | HC | chr4:45387586-45390745 | 20130731
Length = 564
Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 91/132 (68%)
Query: 25 EKGTVTIDGKSAIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFLNAVK 84
E G++ ++G I DD+F+CAT+DWWP EKCDY C WG +S+LNLDL+N I ++
Sbjct: 23 EHGSIEVNGVQGIAENDDNFICATIDWWPQEKCDYNYCPWGSSSVLNLDLSNPILAKVIQ 82
Query: 85 AFSPLKLRLGGSLQDKVNYGTEDYHRPCTPFVRKQSEMFGFTEGCLPMNRWDELNKFFAK 144
A PL++R+GGSLQD+V Y PC F + + +FGF++GCL M RWDELN FF
Sbjct: 83 ALRPLRIRVGGSLQDQVLYEVGSLKSPCQNFQKMKGGLFGFSKGCLHMKRWDELNHFFKN 142
Query: 145 SGAKIIFGLNAL 156
+GA + FGLNAL
Sbjct: 143 TGAMVTFGLNAL 154
>Medtr4g109300.1 | glycoside hydrolase family 79 amine-terminal
domain protein | HC | chr4:45387586-45390508 | 20130731
Length = 548
Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 68/132 (51%), Positives = 91/132 (68%)
Query: 25 EKGTVTIDGKSAIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFLNAVK 84
E G++ ++G I DD+F+CAT+DWWP EKCDY C WG +S+LNLDL+N I ++
Sbjct: 23 EHGSIEVNGVQGIAENDDNFICATIDWWPQEKCDYNYCPWGSSSVLNLDLSNPILAKVIQ 82
Query: 85 AFSPLKLRLGGSLQDKVNYGTEDYHRPCTPFVRKQSEMFGFTEGCLPMNRWDELNKFFAK 144
A PL++R+GGSLQD+V Y PC F + + +FGF++GCL M RWDELN FF
Sbjct: 83 ALRPLRIRVGGSLQDQVLYEVGSLKSPCQNFQKMKGGLFGFSKGCLHMKRWDELNHFFKN 142
Query: 145 SGAKIIFGLNAL 156
+GA + FGLNAL
Sbjct: 143 TGAMVTFGLNAL 154
>Medtr5g043710.1 | glycoside hydrolase family 79 amine-terminal
domain protein | HC | chr5:19216865-19212813 | 20130731
Length = 504
Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 95/133 (71%)
Query: 24 SEKGTVTIDGKSAIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFLNAV 83
+E + + G + I D++F+CATLDWWP KCDY +C WG A +LNLDL N+I NAV
Sbjct: 19 AEDVLLNVKGVTNIATTDNNFICATLDWWPENKCDYNQCPWGKAGILNLDLGNRILSNAV 78
Query: 84 KAFSPLKLRLGGSLQDKVNYGTEDYHRPCTPFVRKQSEMFGFTEGCLPMNRWDELNKFFA 143
KAF+PL++RLGGSLQD++ Y + + C ++ +FGF++GCLP NRWD++N FF
Sbjct: 79 KAFNPLRIRLGGSLQDQIIYQFGSHIKRCPNMIKIAGGLFGFSKGCLPQNRWDQVNDFFN 138
Query: 144 KSGAKIIFGLNAL 156
K+G K+ FGLNAL
Sbjct: 139 KNGVKLTFGLNAL 151
>Medtr3g023700.1 | glycoside hydrolase family 79 amine-terminal
domain protein | HC | chr3:7203745-7207847 | 20130731
Length = 520
Score = 157 bits (398), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 94/133 (70%)
Query: 25 EKGTVTIDGKSAIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFLNAVK 84
E G + ++G A I D+F+CAT+DWWPPE C++G CSWG +S++NLDL++ + A++
Sbjct: 23 EHGLILVNGAQAKAEIGDNFICATIDWWPPELCNFGVCSWGHSSIVNLDLSHPLLAKAIQ 82
Query: 85 AFSPLKLRLGGSLQDKVNYGTEDYHRPCTPFVRKQSEMFGFTEGCLPMNRWDELNKFFAK 144
A PL++RLGGSLQD+V Y + P PF + + GF+EG L M RWDELN FF K
Sbjct: 83 ALKPLRIRLGGSLQDQVVYNVGNLKSPGHPFQKVKGGFLGFSEGSLHMQRWDELNHFFNK 142
Query: 145 SGAKIIFGLNALA 157
+GA ++FGLNAL+
Sbjct: 143 TGAIVMFGLNALS 155
>Medtr3g023710.1 | glycoside hydrolase family 79 amine-terminal
domain protein | HC | chr3:7210088-7213562 | 20130731
Length = 528
Score = 150 bits (379), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 95/135 (70%), Gaps = 2/135 (1%)
Query: 25 EKGTVTIDGKSAIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFLNAVK 84
E G + ++G A D+F+CAT+DWWP +KC+ G CSWG +S++NLDL++ A++
Sbjct: 23 EHGLLLVNGAQAKAETGDNFICATIDWWPHDKCNDGYCSWGHSSIVNLDLSHPFLAKAIQ 82
Query: 85 AFSPLKLRLGGSLQDKVNYGTEDYHRPCTPFVRK--QSEMFGFTEGCLPMNRWDELNKFF 142
A PL++RLGGSLQD++ Y + PC P + Q +FGF++GCL M RWDELN+FF
Sbjct: 83 ALKPLRIRLGGSLQDQIVYDIGNLKSPCHPLQKMNGQGWLFGFSKGCLHMKRWDELNQFF 142
Query: 143 AKSGAKIIFGLNALA 157
++GA ++FGLNAL+
Sbjct: 143 NQTGAIVMFGLNALS 157
>Medtr3g023690.1 | glycoside hydrolase family 79 amine-terminal
domain protein | HC | chr3:7195235-7200903 | 20130731
Length = 516
Score = 148 bits (373), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 93/132 (70%), Gaps = 1/132 (0%)
Query: 25 EKGTVTIDGKSAIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFLNAVK 84
E G + ++G A D+F+CAT+DWWPPE C++G CSWG +S++NLDL+ + A++
Sbjct: 23 EHGLLLVNGAKAKAETGDNFICATIDWWPPE-CNFGVCSWGHSSIVNLDLSRPLLAKAIQ 81
Query: 85 AFSPLKLRLGGSLQDKVNYGTEDYHRPCTPFVRKQSEMFGFTEGCLPMNRWDELNKFFAK 144
A PL++RLGGSLQD+V Y + PF + ++ +FGF++G L M RWDELN FF K
Sbjct: 82 ALKPLRIRLGGSLQDQVVYNVGNLKSTGHPFQKMKNGLFGFSKGSLHMQRWDELNHFFNK 141
Query: 145 SGAKIIFGLNAL 156
+GA ++FGLNAL
Sbjct: 142 TGAIVMFGLNAL 153
>Medtr4g109300.3 | glycoside hydrolase family 79 amine-terminal
domain protein | HC | chr4:45387586-45390508 | 20130731
Length = 582
Score = 146 bits (369), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 85/128 (66%)
Query: 25 EKGTVTIDGKSAIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFLNAVK 84
E G++ ++G I DD+F+CAT+DWWP EKCDY C WG +S+LNLDL+N I ++
Sbjct: 23 EHGSIEVNGVQGIAENDDNFICATIDWWPQEKCDYNYCPWGSSSVLNLDLSNPILAKVIQ 82
Query: 85 AFSPLKLRLGGSLQDKVNYGTEDYHRPCTPFVRKQSEMFGFTEGCLPMNRWDELNKFFAK 144
A PL++R+GGSLQD+V Y PC F + + +FGF++GCL M RWDELN FF
Sbjct: 83 ALRPLRIRVGGSLQDQVLYEVGSLKSPCQNFQKMKGGLFGFSKGCLHMKRWDELNHFFKN 142
Query: 145 SGAKIIFG 152
+G + G
Sbjct: 143 TGFSYVGG 150
>Medtr4g116050.1 | glycoside hydrolase family 79 amine-terminal
domain protein | LC | chr4:47982694-47982110 | 20130731
Length = 77
Score = 73.6 bits (179), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 40/50 (80%)
Query: 85 AFSPLKLRLGGSLQDKVNYGTEDYHRPCTPFVRKQSEMFGFTEGCLPMNR 134
FSPLK+RLGG+LQDK+ YGT+D + CT FV +E+FGFT+GCLPM R
Sbjct: 28 TFSPLKIRLGGTLQDKLTYGTQDNKQHCTTFVLNPNELFGFTQGCLPMKR 77