Miyakogusa Predicted Gene
- Lj4g3v2295970.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2295970.1 tr|Q6J738|Q6J738_MEDTR AML5 OS=Medicago
truncatula GN=MTR_2g049640 PE=2 SV=1,78.84,0,no
description,Nucleotide-binding, alpha-beta plait; RNA recognition
motif,RNA recognition motif
dom,NODE_10188_length_1410_cov_121.843262.path1.1
(483 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g049640.2 | RNA recognition motif 2 in plant MEI2-like pro... 752 0.0
Medtr2g049640.1 | RNA recognition motif 2 in plant MEI2-like pro... 752 0.0
Medtr3g448370.5 | RNA recognition motif 2 in plant MEI2-like pro... 570 e-163
Medtr3g448370.2 | RNA recognition motif 2 in plant MEI2-like pro... 570 e-162
Medtr3g448370.1 | RNA recognition motif 2 in plant MEI2-like pro... 570 e-162
Medtr3g448370.4 | RNA recognition motif 2 in plant MEI2-like pro... 570 e-162
Medtr3g448370.3 | RNA recognition motif 2 in plant MEI2-like pro... 532 e-151
Medtr3g098620.4 | RNA recognition motif 1 in plant MEI2-like pro... 283 3e-76
Medtr3g098620.1 | RNA recognition motif 1 in plant MEI2-like pro... 283 3e-76
Medtr3g098620.3 | RNA recognition motif 1 in plant MEI2-like pro... 283 4e-76
Medtr3g098620.2 | RNA recognition motif 1 in plant MEI2-like pro... 283 4e-76
Medtr3g098620.5 | RNA recognition motif 1 in plant MEI2-like pro... 283 4e-76
Medtr8g100160.1 | RNA recognition motif 1 in plant MEI2-like pro... 262 6e-70
Medtr8g100160.2 | RNA recognition motif 1 in plant MEI2-like pro... 262 7e-70
Medtr7g020950.1 | RNA recognition motif 1 in plant MEI2-like pro... 248 9e-66
Medtr7g020950.2 | RNA recognition motif 1 in plant MEI2-like pro... 248 1e-65
Medtr7g118210.1 | RNA recognition motif 2 in plant MEI2-like pro... 241 1e-63
Medtr5g058270.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 214 2e-55
Medtr5g068540.1 | RNA recognition motif, a.k.a. RRM, RBD protein... 200 3e-51
Medtr3g086380.1 | RNA recognition motif 1 in terminal EAR1-like ... 102 8e-22
Medtr3g462120.1 | RNA recognition motif protein | LC | chr3:2477... 96 7e-20
Medtr4g131970.1 | polyadenylate-binding protein RBP47C | HC | ch... 78 2e-14
Medtr4g068120.2 | flowering time control FPA-like protein | HC |... 75 2e-13
Medtr4g068120.1 | flowering time control FPA-like protein | HC |... 75 2e-13
Medtr2g022950.1 | polyadenylate-binding protein RBP47B | HC | ch... 72 1e-12
Medtr4g085540.1 | polyadenylate-binding protein | HC | chr4:3341... 60 4e-09
Medtr3g101370.1 | polyadenylate-binding protein RBP47C | HC | ch... 60 6e-09
Medtr2g097960.1 | polyadenylate-binding protein RBP47B | HC | ch... 59 1e-08
Medtr7g094660.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 59 2e-08
Medtr1g020080.1 | polyadenylate-binding protein RBP47C | HC | ch... 59 2e-08
Medtr8g027190.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 57 3e-08
Medtr8g027190.2 | RNA-binding (RRM/RBD/RNP motif) family protein... 57 3e-08
Medtr6g040190.1 | polyadenylate-binding protein | LC | chr6:1440... 57 4e-08
Medtr1g045510.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 55 2e-07
Medtr1g097440.2 | polyadenylate-binding protein | HC | chr1:4396... 54 4e-07
Medtr1g097440.1 | polyadenylate-binding protein | HC | chr1:4396... 54 4e-07
Medtr1g061870.1 | polyadenylate-binding plant protein, putative ... 54 4e-07
Medtr3g462100.1 | MEI2-like protein, putative | LC | chr3:247628... 53 5e-07
Medtr1g101520.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 52 2e-06
Medtr3g065190.1 | RNA-binding (RRM/RBD/RNP motif) family protein... 52 2e-06
Medtr7g096260.1 | multiple RNA-binding domain protein | HC | chr... 52 2e-06
Medtr7g096260.2 | multiple RNA-binding domain protein | HC | chr... 51 2e-06
>Medtr2g049640.2 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr2:21883965-21877390 | 20130731
Length = 865
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/501 (76%), Positives = 419/501 (83%), Gaps = 18/501 (3%)
Query: 1 MKQSFDPTSWGPSRIPSINVPGKPGRGPWGVLSGSDXXXXXXXXXXXXXXXPVLPHEKLN 60
MKQSFDP+ PS+IP IN GK G V SGSD PVLPHEKLN
Sbjct: 1 MKQSFDPSFIAPSKIPPINTAGKLRHGALEVSSGSDSYHASSDASLFSSSLPVLPHEKLN 60
Query: 61 LNDTENNYQSVDDISSGFKKLHQDVAVNDSLENGDNDAIGTMLPDDEEELLAGIMDDFNL 120
LN+TEN +QSVDDIS+ FKK HQ+ +N SL+NG+N AIGTMLPDD+EELLAGIMDDF+L
Sbjct: 61 LNETENGFQSVDDISTNFKKHHQEAELNGSLDNGNNHAIGTMLPDDDEELLAGIMDDFDL 120
Query: 121 SDLPGSLEDLEEYDFFGSGGGMELETDPQETLSVGMSNLSFSDSSLGNGLPNYSIPNGVG 180
LPGSLEDLEEYD F S GG+ELETDPQE+LSVG+S LS SDSS+GN +P YS+PNGVG
Sbjct: 121 RGLPGSLEDLEEYDLFDSSGGLELETDPQESLSVGISKLSLSDSSVGNSMPPYSLPNGVG 180
Query: 181 IVAG--EHPYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYY 238
A EHPYGEHPSRTLFVRNINSNVED+EL+ LFEQYGDIRTLYTACKHRGFVMISYY
Sbjct: 181 GGAVAGEHPYGEHPSRTLFVRNINSNVEDTELRTLFEQYGDIRTLYTACKHRGFVMISYY 240
Query: 239 DIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQI 298
DIRAARTAMR+LQNKPLRRRKLDIHFSIPKDNPSDKD+NQGTLVVFNLDPSVSNEDLRQI
Sbjct: 241 DIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLRQI 300
Query: 299 FGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRN 358
FGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRN
Sbjct: 301 FGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRN 360
Query: 359 LMTQLNQDPDQDETRSFRYPVGSPIASSPPGNW--FNSPVEQNSMPTINHSPGSRIMSPT 416
LM QLNQ+ DQDE+RSFRY VGSP+A SPPGNW FNSP+EQ+S+P +NHSPGS+IMSPT
Sbjct: 361 LMLQLNQELDQDESRSFRYQVGSPLAGSPPGNWLQFNSPIEQSSLPNLNHSPGSKIMSPT 420
Query: 417 AGNHLRGLASILQPQVSNTVKAPT--KDIGRNVH------------GATFQSHSLPEPKF 462
NHL GLASILQPQ+SNTVKA T +DIGR+ H G+ F SHSLPEPKF
Sbjct: 421 TSNHLPGLASILQPQLSNTVKAATIGQDIGRSSHGDHIFPNKISSAGSNFNSHSLPEPKF 480
Query: 463 SQYHGALPTFGPSTSNGSSIE 483
S Y GAL +FG STSNGSS+E
Sbjct: 481 SPYRGALSSFGASTSNGSSVE 501
>Medtr2g049640.1 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr2:21883858-21877390 | 20130731
Length = 865
Score = 752 bits (1941), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/501 (76%), Positives = 419/501 (83%), Gaps = 18/501 (3%)
Query: 1 MKQSFDPTSWGPSRIPSINVPGKPGRGPWGVLSGSDXXXXXXXXXXXXXXXPVLPHEKLN 60
MKQSFDP+ PS+IP IN GK G V SGSD PVLPHEKLN
Sbjct: 1 MKQSFDPSFIAPSKIPPINTAGKLRHGALEVSSGSDSYHASSDASLFSSSLPVLPHEKLN 60
Query: 61 LNDTENNYQSVDDISSGFKKLHQDVAVNDSLENGDNDAIGTMLPDDEEELLAGIMDDFNL 120
LN+TEN +QSVDDIS+ FKK HQ+ +N SL+NG+N AIGTMLPDD+EELLAGIMDDF+L
Sbjct: 61 LNETENGFQSVDDISTNFKKHHQEAELNGSLDNGNNHAIGTMLPDDDEELLAGIMDDFDL 120
Query: 121 SDLPGSLEDLEEYDFFGSGGGMELETDPQETLSVGMSNLSFSDSSLGNGLPNYSIPNGVG 180
LPGSLEDLEEYD F S GG+ELETDPQE+LSVG+S LS SDSS+GN +P YS+PNGVG
Sbjct: 121 RGLPGSLEDLEEYDLFDSSGGLELETDPQESLSVGISKLSLSDSSVGNSMPPYSLPNGVG 180
Query: 181 IVAG--EHPYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYY 238
A EHPYGEHPSRTLFVRNINSNVED+EL+ LFEQYGDIRTLYTACKHRGFVMISYY
Sbjct: 181 GGAVAGEHPYGEHPSRTLFVRNINSNVEDTELRTLFEQYGDIRTLYTACKHRGFVMISYY 240
Query: 239 DIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQI 298
DIRAARTAMR+LQNKPLRRRKLDIHFSIPKDNPSDKD+NQGTLVVFNLDPSVSNEDLRQI
Sbjct: 241 DIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDINQGTLVVFNLDPSVSNEDLRQI 300
Query: 299 FGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRN 358
FGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRN
Sbjct: 301 FGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRN 360
Query: 359 LMTQLNQDPDQDETRSFRYPVGSPIASSPPGNW--FNSPVEQNSMPTINHSPGSRIMSPT 416
LM QLNQ+ DQDE+RSFRY VGSP+A SPPGNW FNSP+EQ+S+P +NHSPGS+IMSPT
Sbjct: 361 LMLQLNQELDQDESRSFRYQVGSPLAGSPPGNWLQFNSPIEQSSLPNLNHSPGSKIMSPT 420
Query: 417 AGNHLRGLASILQPQVSNTVKAPT--KDIGRNVH------------GATFQSHSLPEPKF 462
NHL GLASILQPQ+SNTVKA T +DIGR+ H G+ F SHSLPEPKF
Sbjct: 421 TSNHLPGLASILQPQLSNTVKAATIGQDIGRSSHGDHIFPNKISSAGSNFNSHSLPEPKF 480
Query: 463 SQYHGALPTFGPSTSNGSSIE 483
S Y GAL +FG STSNGSS+E
Sbjct: 481 SPYRGALSSFGASTSNGSSVE 501
>Medtr3g448370.5 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16171071-16165361 | 20130731
Length = 876
Score = 570 bits (1470), Expect = e-163, Method: Compositional matrix adjust.
Identities = 299/443 (67%), Positives = 339/443 (76%), Gaps = 15/443 (3%)
Query: 11 GPSRIPSINVPGKPGRGPWGVLSGSDXXXXXXXXXXXXXXXPVLPHEKLNLNDTENNY-- 68
G S I S+N+P K G W + +D PVLPHEKLNL D+E +
Sbjct: 16 GLSGISSLNIPNKGGSSAWRIPHTTDIFHESNDVSLFSTSLPVLPHEKLNLTDSEQDSEQ 75
Query: 69 --QSVDDISSGFKKLHQDVAVNDSLENGDNDAIGTMLPDDEEELLAGIMDDFNLSDLPGS 126
Q VDD K+H++ ND D TMLPDDE+ELLAGIMDDF+L LP
Sbjct: 76 SGQPVDDNLLTLGKVHKEDEGNDLF-----DDFETMLPDDEDELLAGIMDDFDLRRLPNQ 130
Query: 127 LEDLEEYDFFGSGGGMELETDPQETLSVGMSNLSFSDSSLGNGLPNYSIPNGVGIVAGEH 186
LEDL+E D F +GGG E++ +PQE LS G+S +S SD NG+ Y+IPNGVG VAGEH
Sbjct: 131 LEDLDENDLFVNGGGFEMDFEPQEGLSFGISKMSISDGIASNGIGPYAIPNGVGTVAGEH 190
Query: 187 PYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTA 246
PYGEHPSRTLFVRNINSNVEDSEL+ LFEQYGDIRTLYTACKHRGFVMISYYDIRAARTA
Sbjct: 191 PYGEHPSRTLFVRNINSNVEDSELRTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTA 250
Query: 247 MRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVK 306
MR+LQNKPLRRRKLDIHFSIPKDNPS+KD+NQGTLVVFNLDPSVSN+DLRQIFGAYGEVK
Sbjct: 251 MRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVK 310
Query: 307 EIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQD 366
EIRETPHKRHHKFIE+YDVRAA+AALK+LNRSDIAGKRIKLEPSRPGGARRNLM QL+Q+
Sbjct: 311 EIRETPHKRHHKFIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQE 370
Query: 367 PDQDETRSFRYPVGSPIASSPPGNW--FNSPVEQNSMPTINHSPGSRIMSPTAGNHLRGL 424
+QDE R+FR VGSPIA+SPPG+W F SPV+ N + + + SPG SPT NHL GL
Sbjct: 371 LEQDEARTFRSQVGSPIANSPPGSWAHFGSPVDPNPLGSYSKSPGLGHASPT--NHLSGL 428
Query: 425 ASILQPQVSNTVK-APT-KDIGR 445
A+IL P S + K AP KD GR
Sbjct: 429 AAILSPHTSTSPKIAPIGKDPGR 451
>Medtr3g448370.2 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16171071-16165028 | 20130731
Length = 853
Score = 570 bits (1469), Expect = e-162, Method: Compositional matrix adjust.
Identities = 299/443 (67%), Positives = 339/443 (76%), Gaps = 15/443 (3%)
Query: 11 GPSRIPSINVPGKPGRGPWGVLSGSDXXXXXXXXXXXXXXXPVLPHEKLNLNDTENNY-- 68
G S I S+N+P K G W + +D PVLPHEKLNL D+E +
Sbjct: 13 GLSGISSLNIPNKGGSSAWRIPHTTDIFHESNDVSLFSTSLPVLPHEKLNLTDSEQDSEQ 72
Query: 69 --QSVDDISSGFKKLHQDVAVNDSLENGDNDAIGTMLPDDEEELLAGIMDDFNLSDLPGS 126
Q VDD K+H++ ND D TMLPDDE+ELLAGIMDDF+L LP
Sbjct: 73 SGQPVDDNLLTLGKVHKEDEGNDLF-----DDFETMLPDDEDELLAGIMDDFDLRRLPNQ 127
Query: 127 LEDLEEYDFFGSGGGMELETDPQETLSVGMSNLSFSDSSLGNGLPNYSIPNGVGIVAGEH 186
LEDL+E D F +GGG E++ +PQE LS G+S +S SD NG+ Y+IPNGVG VAGEH
Sbjct: 128 LEDLDENDLFVNGGGFEMDFEPQEGLSFGISKMSISDGIASNGIGPYAIPNGVGTVAGEH 187
Query: 187 PYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTA 246
PYGEHPSRTLFVRNINSNVEDSEL+ LFEQYGDIRTLYTACKHRGFVMISYYDIRAARTA
Sbjct: 188 PYGEHPSRTLFVRNINSNVEDSELRTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTA 247
Query: 247 MRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVK 306
MR+LQNKPLRRRKLDIHFSIPKDNPS+KD+NQGTLVVFNLDPSVSN+DLRQIFGAYGEVK
Sbjct: 248 MRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVK 307
Query: 307 EIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQD 366
EIRETPHKRHHKFIE+YDVRAA+AALK+LNRSDIAGKRIKLEPSRPGGARRNLM QL+Q+
Sbjct: 308 EIRETPHKRHHKFIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQE 367
Query: 367 PDQDETRSFRYPVGSPIASSPPGNW--FNSPVEQNSMPTINHSPGSRIMSPTAGNHLRGL 424
+QDE R+FR VGSPIA+SPPG+W F SPV+ N + + + SPG SPT NHL GL
Sbjct: 368 LEQDEARTFRSQVGSPIANSPPGSWAHFGSPVDPNPLGSYSKSPGLGHASPT--NHLSGL 425
Query: 425 ASILQPQVSNTVK-APT-KDIGR 445
A+IL P S + K AP KD GR
Sbjct: 426 AAILSPHTSTSPKIAPIGKDPGR 448
>Medtr3g448370.1 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16171071-16165028 | 20130731
Length = 856
Score = 570 bits (1469), Expect = e-162, Method: Compositional matrix adjust.
Identities = 299/443 (67%), Positives = 339/443 (76%), Gaps = 15/443 (3%)
Query: 11 GPSRIPSINVPGKPGRGPWGVLSGSDXXXXXXXXXXXXXXXPVLPHEKLNLNDTENNY-- 68
G S I S+N+P K G W + +D PVLPHEKLNL D+E +
Sbjct: 16 GLSGISSLNIPNKGGSSAWRIPHTTDIFHESNDVSLFSTSLPVLPHEKLNLTDSEQDSEQ 75
Query: 69 --QSVDDISSGFKKLHQDVAVNDSLENGDNDAIGTMLPDDEEELLAGIMDDFNLSDLPGS 126
Q VDD K+H++ ND D TMLPDDE+ELLAGIMDDF+L LP
Sbjct: 76 SGQPVDDNLLTLGKVHKEDEGNDLF-----DDFETMLPDDEDELLAGIMDDFDLRRLPNQ 130
Query: 127 LEDLEEYDFFGSGGGMELETDPQETLSVGMSNLSFSDSSLGNGLPNYSIPNGVGIVAGEH 186
LEDL+E D F +GGG E++ +PQE LS G+S +S SD NG+ Y+IPNGVG VAGEH
Sbjct: 131 LEDLDENDLFVNGGGFEMDFEPQEGLSFGISKMSISDGIASNGIGPYAIPNGVGTVAGEH 190
Query: 187 PYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTA 246
PYGEHPSRTLFVRNINSNVEDSEL+ LFEQYGDIRTLYTACKHRGFVMISYYDIRAARTA
Sbjct: 191 PYGEHPSRTLFVRNINSNVEDSELRTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTA 250
Query: 247 MRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVK 306
MR+LQNKPLRRRKLDIHFSIPKDNPS+KD+NQGTLVVFNLDPSVSN+DLRQIFGAYGEVK
Sbjct: 251 MRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVK 310
Query: 307 EIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQD 366
EIRETPHKRHHKFIE+YDVRAA+AALK+LNRSDIAGKRIKLEPSRPGGARRNLM QL+Q+
Sbjct: 311 EIRETPHKRHHKFIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQE 370
Query: 367 PDQDETRSFRYPVGSPIASSPPGNW--FNSPVEQNSMPTINHSPGSRIMSPTAGNHLRGL 424
+QDE R+FR VGSPIA+SPPG+W F SPV+ N + + + SPG SPT NHL GL
Sbjct: 371 LEQDEARTFRSQVGSPIANSPPGSWAHFGSPVDPNPLGSYSKSPGLGHASPT--NHLSGL 428
Query: 425 ASILQPQVSNTVK-APT-KDIGR 445
A+IL P S + K AP KD GR
Sbjct: 429 AAILSPHTSTSPKIAPIGKDPGR 451
>Medtr3g448370.4 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16172198-16165028 | 20130731
Length = 867
Score = 570 bits (1468), Expect = e-162, Method: Compositional matrix adjust.
Identities = 299/443 (67%), Positives = 339/443 (76%), Gaps = 15/443 (3%)
Query: 11 GPSRIPSINVPGKPGRGPWGVLSGSDXXXXXXXXXXXXXXXPVLPHEKLNLNDTENNY-- 68
G S I S+N+P K G W + +D PVLPHEKLNL D+E +
Sbjct: 27 GLSGISSLNIPNKGGSSAWRIPHTTDIFHESNDVSLFSTSLPVLPHEKLNLTDSEQDSEQ 86
Query: 69 --QSVDDISSGFKKLHQDVAVNDSLENGDNDAIGTMLPDDEEELLAGIMDDFNLSDLPGS 126
Q VDD K+H++ ND D TMLPDDE+ELLAGIMDDF+L LP
Sbjct: 87 SGQPVDDNLLTLGKVHKEDEGNDLF-----DDFETMLPDDEDELLAGIMDDFDLRRLPNQ 141
Query: 127 LEDLEEYDFFGSGGGMELETDPQETLSVGMSNLSFSDSSLGNGLPNYSIPNGVGIVAGEH 186
LEDL+E D F +GGG E++ +PQE LS G+S +S SD NG+ Y+IPNGVG VAGEH
Sbjct: 142 LEDLDENDLFVNGGGFEMDFEPQEGLSFGISKMSISDGIASNGIGPYAIPNGVGTVAGEH 201
Query: 187 PYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTA 246
PYGEHPSRTLFVRNINSNVEDSEL+ LFEQYGDIRTLYTACKHRGFVMISYYDIRAARTA
Sbjct: 202 PYGEHPSRTLFVRNINSNVEDSELRTLFEQYGDIRTLYTACKHRGFVMISYYDIRAARTA 261
Query: 247 MRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVK 306
MR+LQNKPLRRRKLDIHFSIPKDNPS+KD+NQGTLVVFNLDPSVSN+DLRQIFGAYGEVK
Sbjct: 262 MRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTLVVFNLDPSVSNDDLRQIFGAYGEVK 321
Query: 307 EIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQD 366
EIRETPHKRHHKFIE+YDVRAA+AALK+LNRSDIAGKRIKLEPSRPGGARRNLM QL+Q+
Sbjct: 322 EIRETPHKRHHKFIEFYDVRAADAALKALNRSDIAGKRIKLEPSRPGGARRNLMQQLSQE 381
Query: 367 PDQDETRSFRYPVGSPIASSPPGNW--FNSPVEQNSMPTINHSPGSRIMSPTAGNHLRGL 424
+QDE R+FR VGSPIA+SPPG+W F SPV+ N + + + SPG SPT NHL GL
Sbjct: 382 LEQDEARTFRSQVGSPIANSPPGSWAHFGSPVDPNPLGSYSKSPGLGHASPT--NHLSGL 439
Query: 425 ASILQPQVSNTVK-APT-KDIGR 445
A+IL P S + K AP KD GR
Sbjct: 440 AAILSPHTSTSPKIAPIGKDPGR 462
>Medtr3g448370.3 | RNA recognition motif 2 in plant MEI2-like
protein | HC | chr3:16170586-16165028 | 20130731
Length = 751
Score = 532 bits (1370), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/348 (76%), Positives = 298/348 (85%), Gaps = 6/348 (1%)
Query: 102 MLPDDEEELLAGIMDDFNLSDLPGSLEDLEEYDFFGSGGGMELETDPQETLSVGMSNLSF 161
MLPDDE+ELLAGIMDDF+L LP LEDL+E D F +GGG E++ +PQE LS G+S +S
Sbjct: 1 MLPDDEDELLAGIMDDFDLRRLPNQLEDLDENDLFVNGGGFEMDFEPQEGLSFGISKMSI 60
Query: 162 SDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIR 221
SD NG+ Y+IPNGVG VAGEHPYGEHPSRTLFVRNINSNVEDSEL+ LFEQYGDIR
Sbjct: 61 SDGIASNGIGPYAIPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRTLFEQYGDIR 120
Query: 222 TLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTL 281
TLYTACKHRGFVMISYYDIRAARTAMR+LQNKPLRRRKLDIHFSIPKDNPS+KD+NQGTL
Sbjct: 121 TLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSEKDINQGTL 180
Query: 282 VVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIA 341
VVFNLDPSVSN+DLRQIFGAYGEVKEIRETPHKRHHKFIE+YDVRAA+AALK+LNRSDIA
Sbjct: 181 VVFNLDPSVSNDDLRQIFGAYGEVKEIRETPHKRHHKFIEFYDVRAADAALKALNRSDIA 240
Query: 342 GKRIKLEPSRPGGARRNLMTQLNQDPDQDETRSFRYPVGSPIASSPPGNW--FNSPVEQN 399
GKRIKLEPSRPGGARRNLM QL+Q+ +QDE R+FR VGSPIA+SPPG+W F SPV+ N
Sbjct: 241 GKRIKLEPSRPGGARRNLMQQLSQELEQDEARTFRSQVGSPIANSPPGSWAHFGSPVDPN 300
Query: 400 SMPTINHSPGSRIMSPTAGNHLRGLASILQPQVSNTVK-APT-KDIGR 445
+ + + SPG SPT NHL GLA+IL P S + K AP KD GR
Sbjct: 301 PLGSYSKSPGLGHASPT--NHLSGLAAILSPHTSTSPKIAPIGKDPGR 346
>Medtr3g098620.4 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45043643-45036753 | 20130731
Length = 969
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/282 (54%), Positives = 191/282 (67%), Gaps = 17/282 (6%)
Query: 90 SLENGDNDAIGTMLPDDEEELLAGIMDDFNLSDLPGSLEDLEEYDFFGSGGGMELETDPQ 149
SLE + D IG +LPD E++L +G+ D S + +D E++D F SGGGMELE D
Sbjct: 180 SLEEIEADTIGDLLPD-EDDLFSGVTDGLGGSAHARASDDFEDFDLFSSGGGMELEGDEL 238
Query: 150 ETLSVGMSNLSFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSE 209
+S L +G P YS G G+ +GE SRTLFV NI SN EDSE
Sbjct: 239 SASGKRISGL--------DGDPAYS-----GAFKGKSSFGEQSSRTLFVGNITSNAEDSE 285
Query: 210 LKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKD 269
LKALFEQYGDIRTLYTACKHRGFVMISYYD+RAA+ AM++LQN+ L RKLDI +SIPK
Sbjct: 286 LKALFEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMKALQNRTLSSRKLDIRYSIPKG 345
Query: 270 NPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAE 329
NP++KD+ GTL++ LD +V ++L++IFG YGE+KEI E P H K+IE+YDVR AE
Sbjct: 346 NPTEKDIGHGTLMISGLDSAVLKDELKRIFGFYGEIKEIYEYPEMNHIKYIEFYDVRGAE 405
Query: 330 AALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQDE 371
A+L+SLN +AGK IKLEP P A R MTQ +Q QDE
Sbjct: 406 ASLRSLNGICLAGKHIKLEPGHPRNAIR--MTQPSQK-GQDE 444
>Medtr3g098620.1 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45044608-45036736 | 20130731
Length = 969
Score = 283 bits (724), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/282 (54%), Positives = 191/282 (67%), Gaps = 17/282 (6%)
Query: 90 SLENGDNDAIGTMLPDDEEELLAGIMDDFNLSDLPGSLEDLEEYDFFGSGGGMELETDPQ 149
SLE + D IG +LPD E++L +G+ D S + +D E++D F SGGGMELE D
Sbjct: 180 SLEEIEADTIGDLLPD-EDDLFSGVTDGLGGSAHARASDDFEDFDLFSSGGGMELEGDEL 238
Query: 150 ETLSVGMSNLSFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSE 209
+S L +G P YS G G+ +GE SRTLFV NI SN EDSE
Sbjct: 239 SASGKRISGL--------DGDPAYS-----GAFKGKSSFGEQSSRTLFVGNITSNAEDSE 285
Query: 210 LKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKD 269
LKALFEQYGDIRTLYTACKHRGFVMISYYD+RAA+ AM++LQN+ L RKLDI +SIPK
Sbjct: 286 LKALFEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMKALQNRTLSSRKLDIRYSIPKG 345
Query: 270 NPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAE 329
NP++KD+ GTL++ LD +V ++L++IFG YGE+KEI E P H K+IE+YDVR AE
Sbjct: 346 NPTEKDIGHGTLMISGLDSAVLKDELKRIFGFYGEIKEIYEYPEMNHIKYIEFYDVRGAE 405
Query: 330 AALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQDE 371
A+L+SLN +AGK IKLEP P A R MTQ +Q QDE
Sbjct: 406 ASLRSLNGICLAGKHIKLEPGHPRNAIR--MTQPSQK-GQDE 444
>Medtr3g098620.3 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45044605-45036753 | 20130731
Length = 923
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 154/282 (54%), Positives = 191/282 (67%), Gaps = 17/282 (6%)
Query: 90 SLENGDNDAIGTMLPDDEEELLAGIMDDFNLSDLPGSLEDLEEYDFFGSGGGMELETDPQ 149
SLE + D IG +LPD E++L +G+ D S + +D E++D F SGGGMELE D
Sbjct: 180 SLEEIEADTIGDLLPD-EDDLFSGVTDGLGGSAHARASDDFEDFDLFSSGGGMELEGDEL 238
Query: 150 ETLSVGMSNLSFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSE 209
+S L +G P YS G G+ +GE SRTLFV NI SN EDSE
Sbjct: 239 SASGKRISGL--------DGDPAYS-----GAFKGKSSFGEQSSRTLFVGNITSNAEDSE 285
Query: 210 LKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKD 269
LKALFEQYGDIRTLYTACKHRGFVMISYYD+RAA+ AM++LQN+ L RKLDI +SIPK
Sbjct: 286 LKALFEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMKALQNRTLSSRKLDIRYSIPKG 345
Query: 270 NPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAE 329
NP++KD+ GTL++ LD +V ++L++IFG YGE+KEI E P H K+IE+YDVR AE
Sbjct: 346 NPTEKDIGHGTLMISGLDSAVLKDELKRIFGFYGEIKEIYEYPEMNHIKYIEFYDVRGAE 405
Query: 330 AALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQDE 371
A+L+SLN +AGK IKLEP P A R MTQ +Q QDE
Sbjct: 406 ASLRSLNGICLAGKHIKLEPGHPRNAIR--MTQPSQK-GQDE 444
>Medtr3g098620.2 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45044593-45036753 | 20130731
Length = 923
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 154/282 (54%), Positives = 191/282 (67%), Gaps = 17/282 (6%)
Query: 90 SLENGDNDAIGTMLPDDEEELLAGIMDDFNLSDLPGSLEDLEEYDFFGSGGGMELETDPQ 149
SLE + D IG +LPD E++L +G+ D S + +D E++D F SGGGMELE D
Sbjct: 180 SLEEIEADTIGDLLPD-EDDLFSGVTDGLGGSAHARASDDFEDFDLFSSGGGMELEGDEL 238
Query: 150 ETLSVGMSNLSFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSE 209
+S L +G P YS G G+ +GE SRTLFV NI SN EDSE
Sbjct: 239 SASGKRISGL--------DGDPAYS-----GAFKGKSSFGEQSSRTLFVGNITSNAEDSE 285
Query: 210 LKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKD 269
LKALFEQYGDIRTLYTACKHRGFVMISYYD+RAA+ AM++LQN+ L RKLDI +SIPK
Sbjct: 286 LKALFEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMKALQNRTLSSRKLDIRYSIPKG 345
Query: 270 NPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAE 329
NP++KD+ GTL++ LD +V ++L++IFG YGE+KEI E P H K+IE+YDVR AE
Sbjct: 346 NPTEKDIGHGTLMISGLDSAVLKDELKRIFGFYGEIKEIYEYPEMNHIKYIEFYDVRGAE 405
Query: 330 AALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQDE 371
A+L+SLN +AGK IKLEP P A R MTQ +Q QDE
Sbjct: 406 ASLRSLNGICLAGKHIKLEPGHPRNAIR--MTQPSQK-GQDE 444
>Medtr3g098620.5 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr3:45044608-45037623 | 20130731
Length = 923
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 154/282 (54%), Positives = 191/282 (67%), Gaps = 17/282 (6%)
Query: 90 SLENGDNDAIGTMLPDDEEELLAGIMDDFNLSDLPGSLEDLEEYDFFGSGGGMELETDPQ 149
SLE + D IG +LPD E++L +G+ D S + +D E++D F SGGGMELE D
Sbjct: 180 SLEEIEADTIGDLLPD-EDDLFSGVTDGLGGSAHARASDDFEDFDLFSSGGGMELEGDEL 238
Query: 150 ETLSVGMSNLSFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSE 209
+S L +G P YS G G+ +GE SRTLFV NI SN EDSE
Sbjct: 239 SASGKRISGL--------DGDPAYS-----GAFKGKSSFGEQSSRTLFVGNITSNAEDSE 285
Query: 210 LKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKD 269
LKALFEQYGDIRTLYTACKHRGFVMISYYD+RAA+ AM++LQN+ L RKLDI +SIPK
Sbjct: 286 LKALFEQYGDIRTLYTACKHRGFVMISYYDLRAAQNAMKALQNRTLSSRKLDIRYSIPKG 345
Query: 270 NPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAE 329
NP++KD+ GTL++ LD +V ++L++IFG YGE+KEI E P H K+IE+YDVR AE
Sbjct: 346 NPTEKDIGHGTLMISGLDSAVLKDELKRIFGFYGEIKEIYEYPEMNHIKYIEFYDVRGAE 405
Query: 330 AALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQDE 371
A+L+SLN +AGK IKLEP P A R MTQ +Q QDE
Sbjct: 406 ASLRSLNGICLAGKHIKLEPGHPRNAIR--MTQPSQK-GQDE 444
>Medtr8g100160.1 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr8:40164328-40156696 | 20130731
Length = 964
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 153/280 (54%), Positives = 196/280 (70%), Gaps = 19/280 (6%)
Query: 90 SLENGDNDAIGTMLPDDEEELLAGIMDDFNLSDLPGSLEDLEEYDFFGSGGGMELETDPQ 149
SLE + D I +LPD E++L +G+ D + + +D E D F SGGGMELE D
Sbjct: 179 SLEQMEADYIHNLLPD-EDDLFSGVADGLEYNSHARTNDDSEYTDVFSSGGGMELEGD-- 235
Query: 150 ETLSVGMSNLSFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSE 209
E LS S +S +G + G G+ P+ E PSRTLFVRNINS+VED E
Sbjct: 236 EHLS------SLRRTSGLDGDHGF-----FGGSKGKLPFVEQPSRTLFVRNINSSVEDFE 284
Query: 210 LKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKD 269
LK LFEQYGDIRT+YTACKHRGFVMISY+D+RAA+ AM++LQ+KPLR RKLDIH+SIPK
Sbjct: 285 LKTLFEQYGDIRTMYTACKHRGFVMISYFDLRAAQRAMQALQSKPLRSRKLDIHYSIPKV 344
Query: 270 NPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAE 329
N +KD+ GTL++ LD SVSN++ ++IFG YGE+K+I E P +H KFIE+YDVRAAE
Sbjct: 345 NAPEKDIGHGTLMLSGLDSSVSNDEFKRIFGFYGEIKDIYEYPEMKHLKFIEFYDVRAAE 404
Query: 330 AALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQ 369
AAL++LNR +IAGK+IKLEP P +LM Q ++ D+
Sbjct: 405 AALRALNRIEIAGKQIKLEPGHP-----SLMQQSHKVQDE 439
>Medtr8g100160.2 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr8:40164328-40156696 | 20130731
Length = 968
Score = 262 bits (669), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 154/280 (55%), Positives = 196/280 (70%), Gaps = 15/280 (5%)
Query: 90 SLENGDNDAIGTMLPDDEEELLAGIMDDFNLSDLPGSLEDLEEYDFFGSGGGMELETDPQ 149
SLE + D I +LPD E++L +G+ D + + +D E D F SGGGMELE D
Sbjct: 179 SLEQMEADYIHNLLPD-EDDLFSGVADGLEYNSHARTNDDSEYTDVFSSGGGMELEGD-- 235
Query: 150 ETLSVGMSNLSFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSE 209
E LS S +S +G + G G+ P+ E PSRTLFVRNINS+VED E
Sbjct: 236 EHLS------SLRRTSGLDGDHGF-----FGGSKGKLPFVEQPSRTLFVRNINSSVEDFE 284
Query: 210 LKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKD 269
LK LFEQYGDIRT+YTACKHRGFVMISY+D+RAA+ AM++LQ+KPLR RKLDIH+SIPK
Sbjct: 285 LKTLFEQYGDIRTMYTACKHRGFVMISYFDLRAAQRAMQALQSKPLRSRKLDIHYSIPKV 344
Query: 270 NPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAE 329
N +KD+ GTL++ LD SVSN++ ++IFG YGE+K+I E P +H KFIE+YDVRAAE
Sbjct: 345 NAPEKDIGHGTLMLSGLDSSVSNDEFKRIFGFYGEIKDIYEYPEMKHLKFIEFYDVRAAE 404
Query: 330 AALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQ 369
AAL++LNR +IAGK+IKLEP P A LM Q ++ D+
Sbjct: 405 AALRALNRIEIAGKQIKLEPGHPRFA-TCLMQQSHKVQDE 443
>Medtr7g020950.1 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr7:6550688-6555387 | 20130731
Length = 822
Score = 248 bits (633), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 142/315 (45%), Positives = 199/315 (63%), Gaps = 20/315 (6%)
Query: 57 EKLNLNDTENNY-QSVDDISSGFKKLHQDVAVNDSLENGDNDAIGTMLPDDEEELLAGIM 115
+KL L+ Y SVD I+S + ++ ++DSLE + IG +LPD E++LL+G+
Sbjct: 74 KKLRLSANNAFYGHSVDTIASNY----EEEKLSDSLEELEAQIIGNLLPD-EDDLLSGVT 128
Query: 116 DDFNLSDLPGSLEDLEEYDFFGSGGGMELETDPQETLSVGMSNLSFSDSSLGNGLPNYSI 175
D N + +D++E D F S GG +L D + S+ +S + +G+ N SI
Sbjct: 129 DGNNYIICDSNGDDIDELDLFSSNGGFDL-GDVENPSSIE------RNSEIISGVRNSSI 181
Query: 176 PNGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMI 235
AGE+ YGEHPSRTLFVRNI+S+V+DS LKALFEQ+GDI T CKH+G MI
Sbjct: 182 -------AGENSYGEHPSRTLFVRNIDSDVKDSVLKALFEQFGDIHTFDRTCKHQGSAMI 234
Query: 236 SYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDL 295
SYYDIRAA+ AMR+L N+ R+K DIH+ IPKD+PS VNQGTL VF D S+SN +L
Sbjct: 235 SYYDIRAAQNAMRALNNRLFGRKKFDIHYPIPKDSPSRNGVNQGTLEVFLYDSSISNTEL 294
Query: 296 RQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGA 355
+ I YG +KEI E P + HK IE+YD RAA+AAL +NR+D KR+K++ + +
Sbjct: 295 QHILNVYGGIKEIHENPRSQRHKLIEFYDFRAADAALHGINRNDTTMKRLKVDQMQSTNS 354
Query: 356 RRNLMTQLNQDPDQD 370
N++ ++ + Q+
Sbjct: 355 ESNIIQPMHPEFKQE 369
>Medtr7g020950.2 | RNA recognition motif 1 in plant MEI2-like
protein | HC | chr7:6551414-6555856 | 20130731
Length = 738
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 138/302 (45%), Positives = 193/302 (63%), Gaps = 19/302 (6%)
Query: 69 QSVDDISSGFKKLHQDVAVNDSLENGDNDAIGTMLPDDEEELLAGIMDDFNLSDLPGSLE 128
SVD I+S + ++ ++DSLE + IG +LPD E++LL+G+ D N + +
Sbjct: 21 HSVDTIASNY----EEEKLSDSLEELEAQIIGNLLPD-EDDLLSGVTDGNNYIICDSNGD 75
Query: 129 DLEEYDFFGSGGGMELETDPQETLSVGMSNLSFSDSSLGNGLPNYSIPNGVGIVAGEHPY 188
D++E D F S GG +L D + S+ +S + +G+ N SI AGE+ Y
Sbjct: 76 DIDELDLFSSNGGFDL-GDVENPSSIE------RNSEIISGVRNSSI-------AGENSY 121
Query: 189 GEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMR 248
GEHPSRTLFVRNI+S+V+DS LKALFEQ+GDI T CKH+G MISYYDIRAA+ AMR
Sbjct: 122 GEHPSRTLFVRNIDSDVKDSVLKALFEQFGDIHTFDRTCKHQGSAMISYYDIRAAQNAMR 181
Query: 249 SLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEI 308
+L N+ R+K DIH+ IPKD+PS VNQGTL VF D S+SN +L+ I YG +KEI
Sbjct: 182 ALNNRLFGRKKFDIHYPIPKDSPSRNGVNQGTLEVFLYDSSISNTELQHILNVYGGIKEI 241
Query: 309 RETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQDPD 368
E P + HK IE+YD RAA+AAL +NR+D KR+K++ + + N++ ++ +
Sbjct: 242 HENPRSQRHKLIEFYDFRAADAALHGINRNDTTMKRLKVDQMQSTNSESNIIQPMHPEFK 301
Query: 369 QD 370
Q+
Sbjct: 302 QE 303
>Medtr7g118210.1 | RNA recognition motif 2 in plant MEI2-like
protein, putative | HC | chr7:49062258-49057045 |
20130731
Length = 751
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 134/292 (45%), Positives = 180/292 (61%), Gaps = 20/292 (6%)
Query: 62 NDTENNYQSVDDISSGFKKLHQDVAVNDSLENGDNDAIGTMLPDDEEELLAGIMDDFNLS 121
N+++ + +D +S G + + ++VN++L DAI + EEE L +++
Sbjct: 15 NESQAEWWKIDKLSKGHVRTVR-LSVNNALHGHSVDAIASHY---EEEKLCVSLEELEAQ 70
Query: 122 DLPGSL--EDLEEYDFFGSGGGMELETDPQETLSVGMSNLSFSDSSLGNGLPNYSIPNGV 179
+ L ED +E D S GG++LE ++ S N D +
Sbjct: 71 TIGNLLQDEDEDELDLISSNGGLDLED--FDSSSFREKNCEILDKARNTSF--------- 119
Query: 180 GIVAGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYD 239
A E+P GEHPSRTLFVRNI+S VEDSELKALFEQ+GDI T CKH+G MISYYD
Sbjct: 120 ---AVENPSGEHPSRTLFVRNIDSEVEDSELKALFEQFGDIDTFDRDCKHQGNAMISYYD 176
Query: 240 IRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIF 299
+RAA+ AMR+LQN+ RK DIH+SIPKD+PS K VNQGTL VF D S+SN ++ IF
Sbjct: 177 MRAAQKAMRALQNQLFSCRKFDIHYSIPKDSPSRKGVNQGTLAVFLYDSSISNTEIHNIF 236
Query: 300 GAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSR 351
+G++KEI E PH HHK IE+Y+ AAE AL LNR+D + KR+K+EPS+
Sbjct: 237 NVHGDIKEIHENPHSWHHKLIEFYNFEAAEKALHDLNRNDTSMKRLKVEPSQ 288
>Medtr5g058270.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
HC | chr5:24087213-24086146 | 20130731
Length = 141
Score = 214 bits (544), Expect = 2e-55, Method: Composition-based stats.
Identities = 103/131 (78%), Positives = 116/131 (88%)
Query: 216 QYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKD 275
+YGDIRTLY C+HRGFVMISYYDIRAA +AM +LQ+KPL R LDIHFS PKDNPS KD
Sbjct: 10 KYGDIRTLYKRCRHRGFVMISYYDIRAACSAMHALQDKPLGGRNLDIHFSNPKDNPSQKD 69
Query: 276 VNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSL 335
+NQGT VVFNLD SVSN+DL QI GAYGEVKEIRE+P+KR HKFIE+YDVRAA+AA+K L
Sbjct: 70 INQGTFVVFNLDLSVSNDDLHQICGAYGEVKEIRESPNKRDHKFIEFYDVRAADAAVKEL 129
Query: 336 NRSDIAGKRIK 346
N+SDIAGKRIK
Sbjct: 130 NQSDIAGKRIK 140
>Medtr5g068540.1 | RNA recognition motif, a.k.a. RRM, RBD protein |
LC | chr5:29018170-29014149 | 20130731
Length = 369
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/127 (75%), Positives = 108/127 (85%)
Query: 222 TLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTL 281
TLY C+HRGFVMISYYDIRAA TAM +LQ+K L R LD HFS PKDNPS KD+NQGTL
Sbjct: 118 TLYKRCRHRGFVMISYYDIRAACTAMHALQDKTLGARNLDFHFSNPKDNPSQKDINQGTL 177
Query: 282 VVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIA 341
VVFNLD SVSN+DL QI GAYGEVKEIRETP+KR HKFIE+YDVRAA+AALK+LN+SDI+
Sbjct: 178 VVFNLDLSVSNDDLHQICGAYGEVKEIRETPNKRDHKFIEFYDVRAADAALKALNQSDIS 237
Query: 342 GKRIKLE 348
G +E
Sbjct: 238 GHGGGIE 244
>Medtr3g086380.1 | RNA recognition motif 1 in terminal EAR1-like
protein, putative | HC | chr3:39136472-39139376 |
20130731
Length = 524
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 108/213 (50%), Gaps = 41/213 (19%)
Query: 175 IPNGVGIVAGEHPYGEHPS---RTLFVRNINSN----VEDSELKALFEQYGDIRTLYTAC 227
IP VGI PY P T+ R+I + +++L+ +G++R + T
Sbjct: 20 IPVAVGIPYPYPPYAVTPPPHLSTIPTRSILLSPAPPTPETDLRKDLSAFGEVRAVQTDS 79
Query: 228 KHRGFVMISYYDIRAARTAMRSLQN---------KPLRRRK------------------L 260
G + YYD+R A TA +++ PL + L
Sbjct: 80 FRNGVITAHYYDLRHAETAFAAIRTHHVLCAAYFNPLSYSQIFPTPLPPPPPGLVAGAPL 139
Query: 261 DIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETP-HKRHHKF 319
H+ + SD NQGTLVVFNLD VS++ L+Q+FGA+G +KE+R+TP KR+ F
Sbjct: 140 WAHYVL-----SDAQ-NQGTLVVFNLDDDVSSDQLQQVFGAFGAIKEVRDTPWKKRNQSF 193
Query: 320 IEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 352
+E++D+R AE ALK LN +I GK I +E S+P
Sbjct: 194 VEFFDIRDAEKALKELNGKEINGKPIAIEFSKP 226
>Medtr3g462120.1 | RNA recognition motif protein | LC |
chr3:24775496-24774012 | 20130731
Length = 136
Score = 96.3 bits (238), Expect = 7e-20, Method: Composition-based stats.
Identities = 41/53 (77%), Positives = 49/53 (92%)
Query: 216 QYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPK 268
QYGDI T+YTACKHRGFVMISY+D+RAA+ AM++LQ KPLR RKL+IH+SIPK
Sbjct: 81 QYGDICTMYTACKHRGFVMISYFDLRAAQRAMQALQCKPLRSRKLNIHYSIPK 133
>Medtr4g131970.1 | polyadenylate-binding protein RBP47C | HC |
chr4:55111286-55115662 | 20130731
Length = 411
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 110/232 (47%), Gaps = 29/232 (12%)
Query: 160 SFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSELKALFE-QYG 218
+F+ + + NG N+ + N +GE + + P T+FV ++ ++V D L +F +Y
Sbjct: 134 TFNGTIMPNGGQNFRL-NWATFSSGEKRHDDSPDYTIFVGDLAADVSDHHLTEVFRTRYN 192
Query: 219 DIRTL-----YTACKHRGFVMISYYDIRAARTAMRSLQ---------------NKPLRRR 258
++ T + +G+ + + D AM +Q NK L +
Sbjct: 193 SVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASNKNLGTQ 252
Query: 259 KLDIHFSIPKDNPSDK-DVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHH 317
+ P+ ++ D N T+ V NLDP+V++E L+Q+F YGE+ ++ P +
Sbjct: 253 TSKASYQNPQGGAQNENDPNNTTIFVGNLDPNVTDEHLKQVFTQYGELVHVK-IPSGKRC 311
Query: 318 KFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQ 369
F+++ D +AE AL+ LN + + G+ ++L R + Q QDP+Q
Sbjct: 312 GFVQFADRSSAEEALRVLNGTLLGGQNVRLSWGRSPANK-----QTQQDPNQ 358
>Medtr4g068120.2 | flowering time control FPA-like protein | HC |
chr4:25458538-25448035 | 20130731
Length = 973
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 9/167 (5%)
Query: 192 PSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQ 251
PS L+V N++ +V DS+L LF QYG + ++ T+ R + + + I A+ A +LQ
Sbjct: 25 PSNNLYVANLSPDVTDSDLMDLFVQYGALDSV-TSYSARNYAFVFFKRIDDAKAAKNALQ 83
Query: 252 NKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRET 311
R L I F+ P K Q L V + P+V+ EDL F +G+V++ +
Sbjct: 84 GFNFRGNSLRIEFARPA-----KTCKQ--LWVGGISPAVTKEDLEADFRKFGKVEDFKFF 136
Query: 312 PHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRN 358
R+ +E++++ A A+K +N I G+ I+++ R A+R+
Sbjct: 137 -RDRNTACVEFFNLDDAIQAMKIMNGKHIGGENIRVDFLRSNYAKRD 182
>Medtr4g068120.1 | flowering time control FPA-like protein | HC |
chr4:25458538-25450507 | 20130731
Length = 973
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 9/167 (5%)
Query: 192 PSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQ 251
PS L+V N++ +V DS+L LF QYG + ++ T+ R + + + I A+ A +LQ
Sbjct: 25 PSNNLYVANLSPDVTDSDLMDLFVQYGALDSV-TSYSARNYAFVFFKRIDDAKAAKNALQ 83
Query: 252 NKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRET 311
R L I F+ P K Q L V + P+V+ EDL F +G+V++ +
Sbjct: 84 GFNFRGNSLRIEFARPA-----KTCKQ--LWVGGISPAVTKEDLEADFRKFGKVEDFKFF 136
Query: 312 PHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRN 358
R+ +E++++ A A+K +N I G+ I+++ R A+R+
Sbjct: 137 -RDRNTACVEFFNLDDAIQAMKIMNGKHIGGENIRVDFLRSNYAKRD 182
>Medtr2g022950.1 | polyadenylate-binding protein RBP47B | HC |
chr2:7987418-7992129 | 20130731
Length = 401
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 30/233 (12%)
Query: 160 SFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEH--PSRTLFVRNINSNVEDSELKALFE-Q 216
+++ + + NG NY + N AGE + P T+FV ++ ++V D L+ F +
Sbjct: 120 TYNGTIMPNGGQNYRL-NWATFSAGERSSRQDDGPDHTIFVGDLAADVTDYLLQETFRAR 178
Query: 217 YGDIRTLYTAC-----KHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKD-- 269
Y ++ + +G+ + + D AM +Q R + I + K+
Sbjct: 179 YNSVKGAKVVIDRLTGRSKGYGFVRFADEGEQMRAMTEMQGVLCSTRPMRIGPATNKNPA 238
Query: 270 ---------NPS----DKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRH 316
NPS + D N T+ V NLDP+V+++ LRQ+F YGE+ ++ P +
Sbjct: 239 ATTQPKASYNPSGGQSENDPNNTTIFVGNLDPNVTDDHLRQVFTQYGELVHVK-IPSGKR 297
Query: 317 HKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQ 369
F+++ D AE A++ LN + + G+ ++L R + Q QDP Q
Sbjct: 298 CGFVQFSDRSCAEEAIRVLNGTLLGGQNVRLSWGRTPSNK-----QTQQDPTQ 345
>Medtr4g085540.1 | polyadenylate-binding protein | HC |
chr4:33416965-33423437 | 20130731
Length = 654
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 84/166 (50%), Gaps = 11/166 (6%)
Query: 193 SRTLFVRNINSNVEDSELKALFEQYGDIRTL-----YTACKHRGFVMISYYDIRAARTAM 247
+ +L+V +++ NV DS+L LF Q G + ++ T + G+ ++Y + + A A+
Sbjct: 33 TTSLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARAL 92
Query: 248 RSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE 307
L PL R + I +S +PS + QG + + NLD ++ ++ L F ++G +
Sbjct: 93 DVLNFTPLNNRPIRIMYS--HRDPSIRKSGQGNIFIKNLDKAIDHKALHDTFSSFGNILS 150
Query: 308 IRE----TPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEP 349
+ + + + F+++ AA+ A++ LN + K++ + P
Sbjct: 151 CKVAVDGSGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQVYVGP 196
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 25/194 (12%)
Query: 196 LFVRNINSNVEDSELKALFEQYGDIRTLYTA----CKHRGFVMISYYDIRAARTAMRSL- 250
+FV+N++ + D ELK F ++G I + K + F +++ A A+ +L
Sbjct: 215 VFVKNLSESTTDDELKKTFGEFGTITSAVVMRDGDGKSKCFGFVNFESTDDAARAVEALN 274
Query: 251 --------------QNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLR 296
Q K R +L I F +DK L V NLD S+++E L+
Sbjct: 275 GKKIDDKEWYVGKAQKKSEREHELKIKFEQSMKEAADK-YQGANLYVKNLDDSIADEKLK 333
Query: 297 QIFGAYGEVK--EIRETPH--KRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 352
++F +YG + ++ P+ R F+ + A AL +N +A K + + ++
Sbjct: 334 ELFSSYGTITSCKVMRDPNGVSRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVTLAQR 393
Query: 353 GGARR-NLMTQLNQ 365
RR L Q Q
Sbjct: 394 KEDRRARLQAQFAQ 407
>Medtr3g101370.1 | polyadenylate-binding protein RBP47C | HC |
chr3:46662442-46658399 | 20130731
Length = 420
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 25/206 (12%)
Query: 170 LPNYSIP---NGVGIVAGEHPYGEH-PSRTLFVRNINSNVEDSELKALF-EQYGDIRTLY 224
+PN P N G+H ++ P ++FV ++ ++V D+ L F ++Y ++
Sbjct: 159 MPNTEQPFRLNWATFSTGDHKRSDNVPDLSIFVGDLAADVTDTMLLETFSDKYPSVKAAK 218
Query: 225 TAC-----KHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNP-------- 271
+ +G+ + + D A+ + R + I + P+ +
Sbjct: 219 VVFDANTGRSKGYGFVRFGDDGERSKALNEMNGVFCSSRAMRIGAATPRKSSGYQQGGQS 278
Query: 272 ------SDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDV 325
SD D T+ V LDPS + EDLRQ F YGE+ ++ P + F+++ +
Sbjct: 279 NGTPSQSDTDSTNTTIFVGGLDPSATAEDLRQPFSQYGEIVSVK-IPVGKGCGFVQFANR 337
Query: 326 RAAEAALKSLNRSDIAGKRIKLEPSR 351
AE AL+ LN + + + ++L R
Sbjct: 338 NNAEEALQKLNGTTVGKQTVRLSWGR 363
>Medtr2g097960.1 | polyadenylate-binding protein RBP47B | HC |
chr2:41853094-41847353 | 20130731
Length = 428
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 93/232 (40%), Gaps = 43/232 (18%)
Query: 192 PSRTLFVRNINSNVEDSELKALFE-QYGDIRTLYTAC-----KHRGFVMISYYDIRAART 245
P ++FV ++ +V D L+ F YG +R + +G+ + + D
Sbjct: 106 PDHSIFVGDLAPDVTDYLLQETFRTHYGSVRGAKVVTDPNTGRSKGYGFVKFSDESERNR 165
Query: 246 AMRSLQNKPLRRRKLDIHFSIPKDN----------------------------------- 270
AM + R + I + PK
Sbjct: 166 AMSEMNGVYCSTRPMRISAATPKKTTGYQQNPYAAVVAAAPVPKAIYPVPAYTTAPVNTV 225
Query: 271 PSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEA 330
P + DVN T+ V NLD +VS E+L+Q F +GE+ ++ P K F+++ +AE
Sbjct: 226 PPEYDVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPGKA-CGFVQFGARASAEE 284
Query: 331 ALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQDETRSFRYPVGSP 382
A++ + + + I++ RP AR+++ Q DQ + ++ Y G P
Sbjct: 285 AIQKMQGKILGQQVIRVSWGRPQTARQDVPGGWGQQVDQSQWSAY-YGYGQP 335
>Medtr7g094660.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr7:37745112-37734961 | 20130731
Length = 865
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 21/187 (11%)
Query: 193 SRTLFVRNINSNVEDSELKALF-EQYGDIRTLYTACKHR---------GFVMISYYDIRA 242
+R+LFV+N+N D L+ F E + R L K GF + +
Sbjct: 640 ARSLFVKNLNFKTTDEVLREHFSEHMKEGRILSVKVKKHLKNGKNVSMGFGFVEFDSTET 699
Query: 243 ARTAMRSLQNKPLRRRKLDIHFSIPKDN------PSDKDVNQGTLVVFNLDPSVSNEDLR 296
A + LQ L L + K++ +KD + L+V N+ + +DLR
Sbjct: 700 ATSVCNDLQGTVLDGHALILQLCHVKNDDDKVQKKVEKDKSSTKLLVKNVAFEATEKDLR 759
Query: 297 QIFGAYGEVKEIRETPHK----RHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 352
Q+F +G++K +R P K R F+EY + A+ AL +L+ + + G+ + +E ++
Sbjct: 760 QLFSPFGQIKSLR-LPMKFGNHRGFAFVEYVTQQEAQNALTALSSTHLYGRHLVIERAKE 818
Query: 353 GGARRNL 359
G + L
Sbjct: 819 GESLEEL 825
>Medtr1g020080.1 | polyadenylate-binding protein RBP47C | HC |
chr1:6171590-6176327 | 20130731
Length = 425
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 46/237 (19%)
Query: 195 TLFVRNINSNVEDSELKALFEQ-YGDIR---TLYTA--CKHRGFVMISYYDIRAARTAMR 248
++FV ++ ++V DS L F Y ++ +Y A + +G+ + + D AM
Sbjct: 191 SIFVGDLAADVTDSVLHETFSSSYPSVKAAKVVYDANTGRSKGYGFVRFGDESERSQAMT 250
Query: 249 SLQNKPLRRRKLDIHFSIPKDNP--------------SDKDVNQGTLVVFNLDPSVSNED 294
+ R + I + P+ + S+ D T+ V LD +V++ED
Sbjct: 251 QMNGVYCSSRPMRIGAATPRKSSGHQPGGQSNGTSSQSEADSTNTTIFVGGLDSNVTDED 310
Query: 295 LRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGG 354
L+Q F YGE+ ++ P + F+++ + AE AL+ LN + I + ++L R
Sbjct: 311 LKQTFSQYGEIASVK-IPVGKGCGFVQFANRNNAEEALQKLNGTMIGKQTVRLSWGR--- 366
Query: 355 ARRNLMTQLNQDPDQDETRSFRYPVGSPIASSPPGNWFNSPVEQN---SMPTINHSP 408
+ FR VGS G +F SP+ +MP+ +H P
Sbjct: 367 --------------NPAYKQFRLDVGSWA-----GPYFPSPIYDGYGYAMPSPHHDP 404
>Medtr8g027190.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr8:9557166-9560056 | 20130731
Length = 249
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 194 RTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNK 253
R +F N+ + SEL+ LF +YG I + GF + Y D R A A+R+L N
Sbjct: 2 RPVFAGNLEYDTRQSELERLFSKYGRIERVDMKS---GFAFVYYEDERDAEEAIRALDNI 58
Query: 254 PL--RRRKLDIHFS-----IPKDNPSDKDVNQGTLVVFNLDPSVSN-EDLRQIFGAYGEV 305
P +R+L + ++ +D TL V N DP + D+ + F YG +
Sbjct: 59 PFGHDKRRLSVEWARGERGRHRDGSKPNQKPTKTLFVINFDPIRTRVSDIERHFKPYGPL 118
Query: 306 KEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLE 348
+R +R+ F++Y A AL+ N S I + + +E
Sbjct: 119 HHVR---IRRNFAFVQYETQEDATKALECTNMSKILDRVVSVE 158
>Medtr8g027190.2 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr8:9557166-9560056 | 20130731
Length = 249
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 14/163 (8%)
Query: 194 RTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNK 253
R +F N+ + SEL+ LF +YG I + GF + Y D R A A+R+L N
Sbjct: 2 RPVFAGNLEYDTRQSELERLFSKYGRIERVDMKS---GFAFVYYEDERDAEEAIRALDNI 58
Query: 254 PL--RRRKLDIHFS-----IPKDNPSDKDVNQGTLVVFNLDPSVSN-EDLRQIFGAYGEV 305
P +R+L + ++ +D TL V N DP + D+ + F YG +
Sbjct: 59 PFGHDKRRLSVEWARGERGRHRDGSKPNQKPTKTLFVINFDPIRTRVSDIERHFKPYGPL 118
Query: 306 KEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLE 348
+R +R+ F++Y A AL+ N S I + + +E
Sbjct: 119 HHVR---IRRNFAFVQYETQEDATKALECTNMSKILDRVVSVE 158
>Medtr6g040190.1 | polyadenylate-binding protein | LC |
chr6:14408733-14404765 | 20130731
Length = 623
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 189 GEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHR------GFVMISYYDIRA 242
G + +L+V ++ NV D++L LF Q + ++ C+ + G+ ++Y + R
Sbjct: 20 GRFENSSLYVGDLQGNVNDAQLYDLFSQIAPVISV-RVCRDQMTQSSLGYGYVNYSNARD 78
Query: 243 ARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAY 302
A AM +L PL + + I FS +P + L + NL+ S+ N+ L + F +
Sbjct: 79 AANAMENLNYVPLNGKPIRIMFS--HRDPLIRKTGFANLFIKNLETSIDNKALHETFSVF 136
Query: 303 GEVKEIR----ETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRI 345
G V + H + H F+++ + ++A+ A++ L+ + K++
Sbjct: 137 GNVLSCKVAMDSNGHSKGHGFVQFDNDQSAKNAIEKLDGMLMNDKKV 183
>Medtr1g045510.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr1:17072567-17075712 | 20130731
Length = 285
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 18/179 (10%)
Query: 184 GEHPYGEHPSRT-LFVRNINSNVEDSELKALFEQYGD---IRTLYT--ACKHRGFVMISY 237
G E +RT L+ N+ +V+ + L L E+YG I LY K RGF ++
Sbjct: 102 GGETVAEVDTRTKLYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTM 161
Query: 238 YDIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKD----VNQGTLVVFNLDPSVSNE 293
+ +++L K R L ++FS D P K+ + L V NL +V++E
Sbjct: 162 SCVEDCNAVIQNLDGKEFMGRTLRVNFS---DKPKPKEPLYPETEYKLFVGNLAWTVTSE 218
Query: 294 DLRQIFGAYGEVKEIR-----ETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKL 347
L Q F +G V R ET R + F+ Y + AL ++ ++ G+ +++
Sbjct: 219 SLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMDTALAIMDNVELEGRTLRV 277
>Medtr1g097440.2 | polyadenylate-binding protein | HC |
chr1:43966152-43970565 | 20130731
Length = 646
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 189 GEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHR------GFVMISYYDIRA 242
G + +L+V ++ +V + +L LF Q + ++ C+ + G+ +++ + +
Sbjct: 25 GPFANASLYVGDLEGSVNEGQLFDLFSQVAQVVSIRV-CRDQTRRSSLGYAYVNFTNAQD 83
Query: 243 ARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAY 302
A A L PL + + I FS + +PS + G + + NLD S+ ++ L F A+
Sbjct: 84 AANAKELLNFTPLNEKPIRIMFS--QRDPSVRKSGSGNVFIKNLDTSIDHKALHDTFAAF 141
Query: 303 GEVKEIRET----PHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRI 345
G V + + + F+++ + AA++A+K L+ I K++
Sbjct: 142 GPVLSCKVALDGNGQSKGYGFVQFDNEEAAKSAIKQLDGMLINDKQV 188
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 114/256 (44%), Gaps = 50/256 (19%)
Query: 120 LSDLPGSLEDLEEYDFFGSGG---GMELETDPQETLSVGMSNLSFS---DSSLGNGLPNY 173
+ DL GS+ + + +D F + + D S+G + ++F+ D++ L N+
Sbjct: 34 VGDLEGSVNEGQLFDLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFTNAQDAANAKELLNF 93
Query: 174 SIPNGVGIVAGEHPYGEHPSRTLF----------------VRNINSNVEDSELKALFEQY 217
+ P E P R +F ++N++++++ L F +
Sbjct: 94 T------------PLNEKPIRIMFSQRDPSVRKSGSGNVFIKNLDTSIDHKALHDTFAAF 141
Query: 218 GDIRTLYTAC----KHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSI-----PK 268
G + + A + +G+ + + + AA++A++ L + +++ + F + +
Sbjct: 142 GPVLSCKVALDGNGQSKGYGFVQFDNEEAAKSAIKQLDGMLINDKQVYVGFFVRHQERAR 201
Query: 269 DNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE---IRETPHK-RHHKFIEYYD 324
N S K N + V N+ + ++EDL+Q+FG +G + +++ K R F+ +
Sbjct: 202 TNGSPKFTN---VYVKNISEASTDEDLKQLFGPFGMITSATVMKDANGKSRCFGFVNFQS 258
Query: 325 VRAAEAALKSLNRSDI 340
+A AA++ LN + I
Sbjct: 259 PDSAAAAVEKLNGTAI 274
>Medtr1g097440.1 | polyadenylate-binding protein | HC |
chr1:43966161-43970565 | 20130731
Length = 646
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 81/167 (48%), Gaps = 13/167 (7%)
Query: 189 GEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHR------GFVMISYYDIRA 242
G + +L+V ++ +V + +L LF Q + ++ C+ + G+ +++ + +
Sbjct: 25 GPFANASLYVGDLEGSVNEGQLFDLFSQVAQVVSIRV-CRDQTRRSSLGYAYVNFTNAQD 83
Query: 243 ARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAY 302
A A L PL + + I FS + +PS + G + + NLD S+ ++ L F A+
Sbjct: 84 AANAKELLNFTPLNEKPIRIMFS--QRDPSVRKSGSGNVFIKNLDTSIDHKALHDTFAAF 141
Query: 303 GEVKEIRET----PHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRI 345
G V + + + F+++ + AA++A+K L+ I K++
Sbjct: 142 GPVLSCKVALDGNGQSKGYGFVQFDNEEAAKSAIKQLDGMLINDKQV 188
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/256 (19%), Positives = 114/256 (44%), Gaps = 50/256 (19%)
Query: 120 LSDLPGSLEDLEEYDFFGSGG---GMELETDPQETLSVGMSNLSFS---DSSLGNGLPNY 173
+ DL GS+ + + +D F + + D S+G + ++F+ D++ L N+
Sbjct: 34 VGDLEGSVNEGQLFDLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFTNAQDAANAKELLNF 93
Query: 174 SIPNGVGIVAGEHPYGEHPSRTLF----------------VRNINSNVEDSELKALFEQY 217
+ P E P R +F ++N++++++ L F +
Sbjct: 94 T------------PLNEKPIRIMFSQRDPSVRKSGSGNVFIKNLDTSIDHKALHDTFAAF 141
Query: 218 GDIRTLYTAC----KHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSI-----PK 268
G + + A + +G+ + + + AA++A++ L + +++ + F + +
Sbjct: 142 GPVLSCKVALDGNGQSKGYGFVQFDNEEAAKSAIKQLDGMLINDKQVYVGFFVRHQERAR 201
Query: 269 DNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKE---IRETPHK-RHHKFIEYYD 324
N S K N + V N+ + ++EDL+Q+FG +G + +++ K R F+ +
Sbjct: 202 TNGSPKFTN---VYVKNISEASTDEDLKQLFGPFGMITSATVMKDANGKSRCFGFVNFQS 258
Query: 325 VRAAEAALKSLNRSDI 340
+A AA++ LN + I
Sbjct: 259 PDSAAAAVEKLNGTAI 274
>Medtr1g061870.1 | polyadenylate-binding plant protein, putative |
HC | chr1:27029234-27025443 | 20130731
Length = 522
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 196 LFVRNINSNVEDSELKALFEQYGDIRTLYTA----CKHRGFVMISYYDIRAARTAMRSLQ 251
+FV+N+ +++++ L LF++YG+I + A K +GF I + +A A++ +
Sbjct: 105 VFVKNLAASIDNVGLHDLFQKYGNILSSKIARSEDGKSKGFGYIQFDSEESANVAIQKMN 164
Query: 252 NKPLRRRKLDIHFSIPKDNPS--DKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR 309
+R +++ + I K S D D L V NLDP V+ + L + F ++G++ +
Sbjct: 165 GSTVRDKQIYVGKFIRKSERSLPDLDAKFTNLYVKNLDPVVTEKHLGEKFSSFGKIVSLA 224
Query: 310 ----ETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQL 363
E + F+ Y A A+++++ S K + + ++ R ++ L
Sbjct: 225 IKKDENGQSKGFGFVNYDSPDDARRAMEAMDGSQFGSKILYVARAQKKVEREQILHHL 282
>Medtr3g462100.1 | MEI2-like protein, putative | LC |
chr3:24762802-24761878 | 20130731
Length = 123
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/67 (53%), Positives = 48/67 (71%), Gaps = 6/67 (8%)
Query: 286 LDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRI 345
LD SV N+ +++FG Y E+KE++ + KFIE+YDVRAAEAAL++LN +IAGK I
Sbjct: 5 LDSSVLNDKFKRVFGFYREIKEMK------YLKFIEFYDVRAAEAALRALNMIEIAGKHI 58
Query: 346 KLEPSRP 352
KLE P
Sbjct: 59 KLELGHP 65
>Medtr1g101520.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr1:45856698-45851996 | 20130731
Length = 388
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 19/168 (11%)
Query: 194 RTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNK 253
+ +F N + +SEL+ LF +YG + + GF I D R A A+R+L
Sbjct: 2 KAIFCGNFEYDCRESELERLFRRYGKVDRVDMKA---GFAFIYMEDERDAEAAIRALDRI 58
Query: 254 PLRR--RKLDIHFSI-------PKDNPSDKDVN---QGTLVVFNLDP-SVSNEDLRQIFG 300
R R+L + ++ P + P N TL V N D DL + F
Sbjct: 59 EFGRKGRRLRVEWTKQERGVRRPAERPKRSSANARPSKTLFVINFDTYQTRTRDLERHFE 118
Query: 301 AYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLE 348
YG++ +R +++ F++Y A AL++ N S + + I +E
Sbjct: 119 PYGKIVSVR---IRKNFAFVQYESEDDACKALEATNNSKLMDRVISVE 163
>Medtr3g065190.1 | RNA-binding (RRM/RBD/RNP motif) family protein |
HC | chr3:29411645-29406062 | 20130731
Length = 379
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 175 IPNGVGI-VAGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYT-----ACK 228
I GVG + G+H + T +V N++ + + L LF Q G + +Y +
Sbjct: 5 IAPGVGANLLGQHSAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQ 64
Query: 229 HRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGT-LVVFNLD 287
H+G+ + + A A++ L L + + ++ K + K ++ G L + NLD
Sbjct: 65 HQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGANLFIGNLD 120
Query: 288 PSVSNEDLRQIFGAYGEV----KEIR--ETPHKRHHKFIEYYDVRAAEAALKSLNRSDIA 341
P V + L F A+G + K +R +T + R FI Y A+++A++++N +
Sbjct: 121 PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLC 180
Query: 342 GKRIKL 347
++I +
Sbjct: 181 NRQITV 186
>Medtr7g096260.1 | multiple RNA-binding domain protein | HC |
chr7:38601352-38612085 | 20130731
Length = 709
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 32/192 (16%)
Query: 193 SRTLFVRNINSNVEDSELKALFEQY---GDIRTLYTACKHR-------GFVMISYYDIRA 242
+R+LFV+N+N D L+ F ++ G I ++ + GF + +
Sbjct: 485 ARSLFVKNLNFKTTDEGLREHFSKHMKEGRILSVKVKKHLKKGKNVSMGFGFVEFDSAET 544
Query: 243 ARTAMRSLQN----------KPLRRRKL-DIHFSIPKDNPSDKDVNQGTLVVFNLDPSVS 291
A + LQ +P + + + + KD S K L+V N+ +
Sbjct: 545 ATSVCNDLQGAVLDSYAHILQPCHVKNVGKVQKKVEKDKSSTK------LLVRNVAFEAT 598
Query: 292 NEDLRQIFGAYGEVKEIRETPHK----RHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKL 347
+DLRQ+F +G++K+++ P K R F+EY + A+ AL +L+ + + G+ + +
Sbjct: 599 KKDLRQLFSPFGQIKKLK-LPMKFGNHRGFAFVEYVTQQEAQNALTALSSTHLYGRHLVI 657
Query: 348 EPSRPGGARRNL 359
E ++ G + + L
Sbjct: 658 ERAKEGESLKEL 669
>Medtr7g096260.2 | multiple RNA-binding domain protein | HC |
chr7:38600263-38612243 | 20130731
Length = 723
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 32/192 (16%)
Query: 193 SRTLFVRNINSNVEDSELKALFEQY---GDIRTLYTACKHR-------GFVMISYYDIRA 242
+R+LFV+N+N D L+ F ++ G I ++ + GF + +
Sbjct: 499 ARSLFVKNLNFKTTDEGLREHFSKHMKEGRILSVKVKKHLKKGKNVSMGFGFVEFDSAET 558
Query: 243 ARTAMRSLQN----------KPLRRRKL-DIHFSIPKDNPSDKDVNQGTLVVFNLDPSVS 291
A + LQ +P + + + + KD S K L+V N+ +
Sbjct: 559 ATSVCNDLQGAVLDSYAHILQPCHVKNVGKVQKKVEKDKSSTK------LLVRNVAFEAT 612
Query: 292 NEDLRQIFGAYGEVKEIRETPHK----RHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKL 347
+DLRQ+F +G++K+++ P K R F+EY + A+ AL +L+ + + G+ + +
Sbjct: 613 KKDLRQLFSPFGQIKKLK-LPMKFGNHRGFAFVEYVTQQEAQNALTALSSTHLYGRHLVI 671
Query: 348 EPSRPGGARRNL 359
E ++ G + + L
Sbjct: 672 ERAKEGESLKEL 683