Miyakogusa Predicted Gene
- Lj4g3v2295890.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2295890.1 Non Characterized Hit- tr|I1L257|I1L257_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37462
PE,84.62,0,HIS_KIN,Signal transduction histidine kinase, core; His
Kinase A (phosphoacceptor) domain,Signal
tra,NODE_75972_length_989_cov_8.184024.path1.1
(273 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g049520.1 | phytochrome protein | HC | chr2:21814696-21818... 467 e-132
Medtr2g034040.1 | phytochrome protein B | HC | chr2:12993536-129... 283 9e-77
Medtr1g085160.1 | phytochrome protein A | HC | chr1:38027094-380... 159 3e-39
Medtr1g085160.3 | phytochrome protein A | HC | chr1:38026874-380... 159 3e-39
Medtr1g085160.2 | phytochrome protein A | HC | chr1:38026874-380... 159 3e-39
Medtr8g106150.2 | cytokinin receptor histidine kinase | HC | chr... 55 7e-08
Medtr8g106150.4 | cytokinin receptor histidine kinase | HC | chr... 55 7e-08
Medtr8g106150.1 | cytokinin receptor histidine kinase | HC | chr... 55 7e-08
Medtr8g106150.3 | cytokinin receptor histidine kinase | HC | chr... 55 8e-08
Medtr4g031150.1 | hybrid sensory histidine kinase | HC | chr4:10... 52 6e-07
Medtr8g080770.1 | cytokinin receptor histidine kinase | HC | chr... 48 8e-06
Medtr8g080770.2 | cytokinin receptor histidine kinase | HC | chr... 48 9e-06
>Medtr2g049520.1 | phytochrome protein | HC | chr2:21814696-21818763 |
20130731
Length = 1122
Score = 467 bits (1202), Expect = e-132, Method: Compositional matrix adjust.
Identities = 219/271 (80%), Positives = 249/271 (91%)
Query: 1 MIGCFCFLQIVSRDPSQPSDGHRSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENT 60
+IGCFCFL +V+ D +QP GHRS+ R+ I +SKELAYILQEMKNPLNG+RFTHKLLENT
Sbjct: 848 IIGCFCFLHVVTEDLNQPFQGHRSKCRQRISKSKELAYILQEMKNPLNGIRFTHKLLENT 907
Query: 61 AVSENQKQFLDTSDACERQIMAIIENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMML 120
+SENQKQ LDTS+ACERQIMAIIE+ DL SINEGT +LNM+EFLLGNILDA+VSQVMML
Sbjct: 908 GISENQKQLLDTSEACERQIMAIIEDIDLGSINEGTWKLNMKEFLLGNILDAVVSQVMML 967
Query: 121 IKGKNLQLFHEIPEEIKTLALYGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKISPGLKI 180
IKGK+LQ+FHEI ++I+TL+LYGDQIRLQ+VLSD L N+VSHTPSPNGW+E+KI+PGLKI
Sbjct: 968 IKGKDLQMFHEISDKIQTLSLYGDQIRLQMVLSDILHNIVSHTPSPNGWIEMKITPGLKI 1027
Query: 181 IQDGNEFIHLKFRMTHSGQGLPSAVLHDMFEGGNQWTTQEGLGLYMSRKILSRMNGHVQY 240
IQDGNEFIHLKFRMTHSGQGLPS++LHDMF G NQWTTQEGLGL+MSRKILSRMNG V Y
Sbjct: 1028 IQDGNEFIHLKFRMTHSGQGLPSSILHDMFYGENQWTTQEGLGLFMSRKILSRMNGDVHY 1087
Query: 241 VREQNKCYFLIDLELRTRKERQRNLQAKISM 271
VREQNKCYFLIDLELRTRKERQRNL+ + SM
Sbjct: 1088 VREQNKCYFLIDLELRTRKERQRNLKTETSM 1118
>Medtr2g034040.1 | phytochrome protein B | HC | chr2:12993536-12986584
| 20130731
Length = 1198
Score = 283 bits (725), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 142/264 (53%), Positives = 192/264 (72%), Gaps = 1/264 (0%)
Query: 1 MIGCFCFLQIVSRDPSQPSDGHRSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENT 60
+IG FCFLQIVS + Q R + KELAYI QE+KNPL+G+RFT+ LLE+T
Sbjct: 888 IIGAFCFLQIVSPELQQALTVQRQQDSSCFARMKELAYICQEVKNPLSGIRFTNSLLEST 947
Query: 61 AVSENQKQFLDTSDACERQIMAIIENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMML 120
+++ QKQ L+TS ACE+Q++ II + DL+ I+ G+L+L EFLL N+++A+VSQVM+L
Sbjct: 948 CLTDEQKQLLETSVACEKQMLKIIRDIDLDIIDNGSLELEKREFLLENVINAVVSQVMLL 1007
Query: 121 IKGKNLQLFHEIPEEIKTLALYGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKISPGLKI 180
++ +NLQL +IPEEIK LA+YGDQ+R+Q VL+DFL+NVV + PSP+GWVEI + P +K
Sbjct: 1008 LRERNLQLIRDIPEEIKALAVYGDQLRIQQVLADFLMNVVRYAPSPDGWVEIHVFPRIKQ 1067
Query: 181 IQDGNEFIHLKFRMTHSGQGLPSAVLHDMFEGGNQWTTQEGLGLYMSRKILSRMNGHVQY 240
I DG +H +FRM G+GLP ++ DMF ++W TQEGLGL MSRKI+ MNG VQY
Sbjct: 1068 ISDGLTLLHAEFRMVCPGEGLPPELIQDMFH-NSKWVTQEGLGLSMSRKIIKLMNGEVQY 1126
Query: 241 VREQNKCYFLIDLELRTRKERQRN 264
VRE +CYFL+ LEL + +N
Sbjct: 1127 VREAERCYFLVVLELPVTRRSLKN 1150
>Medtr1g085160.1 | phytochrome protein A | HC | chr1:38027094-38021769
| 20130731
Length = 1171
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 160/257 (62%), Gaps = 6/257 (2%)
Query: 1 MIGCFCFLQIVSRDPSQPSDGHRSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENT 60
+ G FCFLQ+ S + Q R + ++ K L Y+ ++++NPL+G+ F+ K+LENT
Sbjct: 911 VTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLTYMRRQIRNPLSGIVFSSKMLENT 970
Query: 61 AVSENQKQFLDTSDACERQIMAIIENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMML 120
+ QK+ ++TS C+RQ+ I+++SDL+SI +G L L M EF L +L +SQVM
Sbjct: 971 ELGTEQKRIVNTSSQCQRQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQVMNR 1030
Query: 121 IKGKNLQLFHEIPEEIKTLALYGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKISPGLKI 180
+++++ +++ E I LYGD +RLQ VL+DFLL +S +PNG ++ I+ L
Sbjct: 1031 SNTRSIRIVNDVAEHIAMETLYGDSLRLQQVLADFLL--ISINSTPNGG-QVVIAATLTK 1087
Query: 181 IQDGNE--FIHLKFRMTHSGQGLPSAVLHDMFEGGNQWTTQEGLGLYMSRKILSRMNGHV 238
Q G ++L+ +TH G G+ AVL+ MF G N ++EG+ L++SRK+L MNG V
Sbjct: 1088 EQLGKSVHLVNLELSITHGGNGVAEAVLNQMF-GNNGLESEEGISLHISRKLLKLMNGDV 1146
Query: 239 QYVREQNKCYFLIDLEL 255
+Y++E K F++ +EL
Sbjct: 1147 RYLKEAGKSSFILSVEL 1163
>Medtr1g085160.3 | phytochrome protein A | HC | chr1:38026874-38021654
| 20130731
Length = 1124
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 160/257 (62%), Gaps = 6/257 (2%)
Query: 1 MIGCFCFLQIVSRDPSQPSDGHRSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENT 60
+ G FCFLQ+ S + Q R + ++ K L Y+ ++++NPL+G+ F+ K+LENT
Sbjct: 864 VTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLTYMRRQIRNPLSGIVFSSKMLENT 923
Query: 61 AVSENQKQFLDTSDACERQIMAIIENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMML 120
+ QK+ ++TS C+RQ+ I+++SDL+SI +G L L M EF L +L +SQVM
Sbjct: 924 ELGTEQKRIVNTSSQCQRQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQVMNR 983
Query: 121 IKGKNLQLFHEIPEEIKTLALYGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKISPGLKI 180
+++++ +++ E I LYGD +RLQ VL+DFLL +S +PNG ++ I+ L
Sbjct: 984 SNTRSIRIVNDVAEHIAMETLYGDSLRLQQVLADFLL--ISINSTPNGG-QVVIAATLTK 1040
Query: 181 IQDGNE--FIHLKFRMTHSGQGLPSAVLHDMFEGGNQWTTQEGLGLYMSRKILSRMNGHV 238
Q G ++L+ +TH G G+ AVL+ MF G N ++EG+ L++SRK+L MNG V
Sbjct: 1041 EQLGKSVHLVNLELSITHGGNGVAEAVLNQMF-GNNGLESEEGISLHISRKLLKLMNGDV 1099
Query: 239 QYVREQNKCYFLIDLEL 255
+Y++E K F++ +EL
Sbjct: 1100 RYLKEAGKSSFILSVEL 1116
>Medtr1g085160.2 | phytochrome protein A | HC | chr1:38026874-38021654
| 20130731
Length = 1124
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 99/257 (38%), Positives = 160/257 (62%), Gaps = 6/257 (2%)
Query: 1 MIGCFCFLQIVSRDPSQPSDGHRSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENT 60
+ G FCFLQ+ S + Q R + ++ K L Y+ ++++NPL+G+ F+ K+LENT
Sbjct: 864 VTGVFCFLQLASPELQQALHIQRLSEQTALKRLKVLTYMRRQIRNPLSGIVFSSKMLENT 923
Query: 61 AVSENQKQFLDTSDACERQIMAIIENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMML 120
+ QK+ ++TS C+RQ+ I+++SDL+SI +G L L M EF L +L +SQVM
Sbjct: 924 ELGTEQKRIVNTSSQCQRQLSKILDDSDLDSIIDGYLDLEMAEFTLHEVLVTSLSQVMNR 983
Query: 121 IKGKNLQLFHEIPEEIKTLALYGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKISPGLKI 180
+++++ +++ E I LYGD +RLQ VL+DFLL +S +PNG ++ I+ L
Sbjct: 984 SNTRSIRIVNDVAEHIAMETLYGDSLRLQQVLADFLL--ISINSTPNGG-QVVIAATLTK 1040
Query: 181 IQDGNE--FIHLKFRMTHSGQGLPSAVLHDMFEGGNQWTTQEGLGLYMSRKILSRMNGHV 238
Q G ++L+ +TH G G+ AVL+ MF G N ++EG+ L++SRK+L MNG V
Sbjct: 1041 EQLGKSVHLVNLELSITHGGNGVAEAVLNQMF-GNNGLESEEGISLHISRKLLKLMNGDV 1099
Query: 239 QYVREQNKCYFLIDLEL 255
+Y++E K F++ +EL
Sbjct: 1100 RYLKEAGKSSFILSVEL 1116
>Medtr8g106150.2 | cytokinin receptor histidine kinase | HC |
chr8:44824480-44817990 | 20130731
Length = 1003
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Query: 23 RSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENTAVSENQKQFLDTSDACERQIMA 82
R+E + + +S+ LA + E++ P+NG+ LL T ++ Q+ + T+ AC + ++A
Sbjct: 376 RAEAAD-VAKSQFLATVSHEIRTPMNGILGMLGLLLRTELNSTQRDYAQTAQACGKALIA 434
Query: 83 II-ENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMMLIKGKNLQLFHEIPEEIKTLAL 141
+I E D I G L+L F L +ILD ++S + K L+L + +++ + +
Sbjct: 435 LINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVM 494
Query: 142 YGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKISPGLKIIQDG 184
GD R + ++++ + N V T + +V++ +S K + +G
Sbjct: 495 -GDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLSENRKPVTNG 536
>Medtr8g106150.4 | cytokinin receptor histidine kinase | HC |
chr8:44823842-44817990 | 20130731
Length = 1003
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Query: 23 RSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENTAVSENQKQFLDTSDACERQIMA 82
R+E + + +S+ LA + E++ P+NG+ LL T ++ Q+ + T+ AC + ++A
Sbjct: 376 RAEAAD-VAKSQFLATVSHEIRTPMNGILGMLGLLLRTELNSTQRDYAQTAQACGKALIA 434
Query: 83 II-ENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMMLIKGKNLQLFHEIPEEIKTLAL 141
+I E D I G L+L F L +ILD ++S + K L+L + +++ + +
Sbjct: 435 LINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVM 494
Query: 142 YGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKISPGLKIIQDG 184
GD R + ++++ + N V T + +V++ +S K + +G
Sbjct: 495 -GDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLSENRKPVTNG 536
>Medtr8g106150.1 | cytokinin receptor histidine kinase | HC |
chr8:44824500-44817990 | 20130731
Length = 1003
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Query: 23 RSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENTAVSENQKQFLDTSDACERQIMA 82
R+E + + +S+ LA + E++ P+NG+ LL T ++ Q+ + T+ AC + ++A
Sbjct: 376 RAEAAD-VAKSQFLATVSHEIRTPMNGILGMLGLLLRTELNSTQRDYAQTAQACGKALIA 434
Query: 83 II-ENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMMLIKGKNLQLFHEIPEEIKTLAL 141
+I E D I G L+L F L +ILD ++S + K L+L + +++ + +
Sbjct: 435 LINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVM 494
Query: 142 YGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKISPGLKIIQDG 184
GD R + ++++ + N V T + +V++ +S K + +G
Sbjct: 495 -GDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLSENRKPVTNG 536
>Medtr8g106150.3 | cytokinin receptor histidine kinase | HC |
chr8:44822464-44817990 | 20130731
Length = 760
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 87/163 (53%), Gaps = 3/163 (1%)
Query: 23 RSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENTAVSENQKQFLDTSDACERQIMA 82
R+E + + +S+ LA + E++ P+NG+ LL T ++ Q+ + T+ AC + ++A
Sbjct: 133 RAEAAD-VAKSQFLATVSHEIRTPMNGILGMLGLLLRTELNSTQRDYAQTAQACGKALIA 191
Query: 83 II-ENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMMLIKGKNLQLFHEIPEEIKTLAL 141
+I E D I G L+L F L +ILD ++S + K L+L + +++ + +
Sbjct: 192 LINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVM 251
Query: 142 YGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKISPGLKIIQDG 184
GD R + ++++ + N V T + +V++ +S K + +G
Sbjct: 252 -GDPGRFRQIVTNLVGNSVKFTERGHIFVKVHLSENRKPVTNG 293
>Medtr4g031150.1 | hybrid sensory histidine kinase | HC |
chr4:10593442-10597271 | 20130731
Length = 790
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 105/239 (43%), Gaps = 23/239 (9%)
Query: 20 DGHRSEGRESIYESKE-LAYILQEMKNPLNGLRFTHKLLENTAVSENQKQFLDTSDACER 78
D R E +I+ + LA + EM+ P++ + L++ T ++ Q+ ++T
Sbjct: 381 DMARREAETAIHARNDFLAVMNHEMRTPMHAIIALSSLMQETDLTAEQRLMVETILKSSN 440
Query: 79 QIMAIIENS-DLESINEGTLQLNMEEFLLGNILDAIVSQVMMLIKGKNLQLFHEIPEEIK 137
+ ++ + DL + +G+ QL + F L ++ +++ + + K L L ++
Sbjct: 441 LLATLVNDVLDLSRLEDGSFQLEISTFNLHSLFREVLNLIKPVASVKKLSLTLHFASDLP 500
Query: 138 TLALYGDQIRLQVVLSDFLLNVVSHTP-----------SPNGWVEIKISPGLKIIQDGNE 186
A+ GD+ RL +L + + N V T P + +I+ L + D +
Sbjct: 501 VHAI-GDEKRLMQILLNVVGNAVKFTKEGSISITVVVVKPESFRDIRFPDFLPVPSDSH- 558
Query: 187 FIHLKFRMTHSGQGLPSAVLHDMFEG-------GNQWTTQEGLGLYMSRKILSRMNGHV 238
+L+ ++ SG G+ + +F G + GLGL + ++ ++ M GH+
Sbjct: 559 -FYLRVQVKDSGSGINPQDIPKLFTKFAQNQTLGTKNPVGSGLGLAICKRFVNLMEGHI 616
>Medtr8g080770.1 | cytokinin receptor histidine kinase | HC |
chr8:34767110-34773417 | 20130731
Length = 970
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 23 RSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENTAVSENQKQFLDTSDACERQIMA 82
R+E + + +S+ LA + E++ P+NG+ +L +T + Q++++ T+ + +++
Sbjct: 385 RAEAAD-VAKSQFLATVSHEIRTPMNGVLGMMHMLMDTDLDVTQQEYVRTAQESGKALVS 443
Query: 83 II-ENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMMLIKGKNLQLFHEIPEEIKTLAL 141
+I E D I G L+L F + +ILD ++S +GK ++L + +++ L L
Sbjct: 444 LINEVLDQAKIEFGKLELEAVLFDIRSILDDVLSLFSDKSQGKGVELAAYVSDQVPKL-L 502
Query: 142 YGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKI 174
GD R + ++++ + N + T + +V I +
Sbjct: 503 IGDPGRFRQIITNLMGNSIKFTDKGHIFVTIHL 535
>Medtr8g080770.2 | cytokinin receptor histidine kinase | HC |
chr8:34768417-34773414 | 20130731
Length = 861
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 23 RSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENTAVSENQKQFLDTSDACERQIMA 82
R+E + + +S+ LA + E++ P+NG+ +L +T + Q++++ T+ + +++
Sbjct: 276 RAEAAD-VAKSQFLATVSHEIRTPMNGVLGMMHMLMDTDLDVTQQEYVRTAQESGKALVS 334
Query: 83 II-ENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMMLIKGKNLQLFHEIPEEIKTLAL 141
+I E D I G L+L F + +ILD ++S +GK ++L + +++ L L
Sbjct: 335 LINEVLDQAKIEFGKLELEAVLFDIRSILDDVLSLFSDKSQGKGVELAAYVSDQVPKL-L 393
Query: 142 YGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKI 174
GD R + ++++ + N + T + +V I +
Sbjct: 394 IGDPGRFRQIITNLMGNSIKFTDKGHIFVTIHL 426