Miyakogusa Predicted Gene
- Lj4g3v2295880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2295880.1 Non Characterized Hit- tr|I1L257|I1L257_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37462
PE,84.88,0,PHY,Phytochrome, central region; PAS,PAS fold; PAS_2,PAS
fold-2; GAF,GAF domain; Domain present in
p,NODE_37971_length_2753_cov_7.908827.path2.1
(864 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g049520.1 | phytochrome protein | HC | chr2:21814696-21818... 1359 0.0
Medtr2g034040.1 | phytochrome protein B | HC | chr2:12993536-129... 1152 0.0
Medtr1g085160.1 | phytochrome protein A | HC | chr1:38027094-380... 939 0.0
Medtr1g085160.3 | phytochrome protein A | HC | chr1:38026874-380... 939 0.0
Medtr1g085160.2 | phytochrome protein A | HC | chr1:38026874-380... 939 0.0
>Medtr2g049520.1 | phytochrome protein | HC | chr2:21814696-21818763
| 20130731
Length = 1122
Score = 1359 bits (3518), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 649/865 (75%), Positives = 731/865 (84%), Gaps = 7/865 (0%)
Query: 1 MSSGSRGNLKDSSFTSNMNTATTSNKD--KALAQFSADAENLAEFEQSGASDKSFDYSKT 58
MS GS+ LK S +S+ + +NK+ K LAQ+ DAE LAEFEQS KSF+YSKT
Sbjct: 1 MSFGSKEKLKGVSLSSSAESKMNTNKETEKTLAQYGVDAELLAEFEQSRVYGKSFEYSKT 60
Query: 59 VLDSPRLVSEEKMTAYLSKIQRGGLIQSFGCMLAIAESTFTIIGYSENCFQLLGLERHID 118
+LD PRLVSEEKM YLS+IQRGG IQ FGC++ I ESTF IIGYSENCFQLLG I
Sbjct: 61 ILDPPRLVSEEKMITYLSRIQRGGFIQPFGCLVVIEESTFRIIGYSENCFQLLG---DIG 117
Query: 119 SKQQLLGLIGVDATTLFTPPSGASLAKAVSSREISLLNPIWVYTRTTQKPFYAILHRIDV 178
S + +GLIGVDATTLFTPPSG+SL KAV+SREIS LNPIWV RTT+KPFYAILHRIDV
Sbjct: 118 S-EHFMGLIGVDATTLFTPPSGSSLVKAVASREISRLNPIWVRARTTEKPFYAILHRIDV 176
Query: 179 GVVIDLEPARSSDPALSLAGTVQSQKLAIRASSRLQSRPGEDSGLLCDAVVEEVQKFTGY 238
GV+IDLEPARSS PALSL+G+ QSQK+A+ A SRLQS ED LLCD VVEEVQK TGY
Sbjct: 177 GVLIDLEPARSSGPALSLSGSFQSQKMAVSAISRLQSCRREDISLLCDTVVEEVQKLTGY 236
Query: 239 DRVMVYKFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCQAN 298
+RVM+YKFHEDDHGEVVSE RRSDLE YLGLHYP+ DIPQAARFLFKQNRVR+I DC A
Sbjct: 237 ERVMIYKFHEDDHGEVVSETRRSDLESYLGLHYPSIDIPQAARFLFKQNRVRLIYDCHAK 296
Query: 299 AVKVIQSEDLMQPLYLVNSTLRAPQGCHSQYMANMGSIASLVMAVIVNGNDTTRLWGLLV 358
VKVIQS +L +PL LVNSTLR+P CH QYMANMGSIASLVMAV++N DTTRLWGLLV
Sbjct: 297 PVKVIQSRELKKPLCLVNSTLRSPHDCHKQYMANMGSIASLVMAVVINEKDTTRLWGLLV 356
Query: 359 CHHTSPRYVPFPVRYACEFLMQAFGLQLYMEIQLAAQMAEKRILKTQTLLCDMLLRDAPF 418
CHHTSP +V FPVR+ACEF+M FG+QLYMEIQLA+QM EKRILKTQT+LCDMLLRDAPF
Sbjct: 357 CHHTSPHHVSFPVRHACEFVMHTFGMQLYMEIQLASQMEEKRILKTQTMLCDMLLRDAPF 416
Query: 419 GIVTQSPSIMDLVKCDGAALYYDGKCWLLGTTPTESQVKDIAEWLLVNHGDSTGLSTNSL 478
GIVTQSPSIMDLVKCDGAALYYD CWLLG TPT+ QVKDIAEWLL N+ DSTGL+T SL
Sbjct: 417 GIVTQSPSIMDLVKCDGAALYYDENCWLLGITPTKLQVKDIAEWLLSNYSDSTGLTTESL 476
Query: 479 AEAGYPGATSLGDPVCGMATARINSRHFLFWFRSHTAKEMKWGGAKHHPEDKDDGGKMNP 538
+AGYPGAT LGD VCGMA+ARIN RH LFWFRSHTAKE++WGGAKHHP DKDDGGKMNP
Sbjct: 477 VDAGYPGATLLGDAVCGMASARINQRHILFWFRSHTAKEIQWGGAKHHPTDKDDGGKMNP 536
Query: 539 RSSFKAFLEIVKRKSLPWEVSEINAIHSLQLIMRDSFQDTQNFGPTTLNFIQKIGTAIER 598
R+SFKAFLE++K KSLPWE+SEINAIHSLQLIM+D FQDT N P TL +K I
Sbjct: 537 RTSFKAFLEVLKSKSLPWEISEINAIHSLQLIMQDLFQDTDNTCPKTLKDFEKSDALIGG 596
Query: 599 KGELSSVACEMVRLIETATVPIFGVDSDGLINGWNVQTSELTGLQASEAIGKSLVNEVVH 658
E+SS+A EMVRLIETA VPIFGVDSDGLINGWNV+ +ELTGL SEA+GKSL NEVVH
Sbjct: 597 SHEISSIALEMVRLIETAAVPIFGVDSDGLINGWNVKIAELTGLPTSEAMGKSLENEVVH 656
Query: 659 ADSRETLTNVLSRALQGEEEKNVELKIKHFGIDQ-KKVVYLRANACTSRDYTNAIVGVCF 717
DSRETLTN+L RALQG++ KNVELKI F + Q K+VVYL ++C SRDYTNAIVGV F
Sbjct: 657 VDSRETLTNILRRALQGQDNKNVELKINRFVLHQEKEVVYLMISSCISRDYTNAIVGVGF 716
Query: 718 VGQDITHEKVVLDKFIKLEGDYKAIIQSLNPLIPPIFASDENACCSEWNAAMEKLTGWKR 777
VGQDIT EKV++ KFIKLEGDYKAI+ SLNPLIPPIFASDENACCSEWN AME++TGWK+
Sbjct: 717 VGQDITFEKVIVKKFIKLEGDYKAIMHSLNPLIPPIFASDENACCSEWNVAMERVTGWKK 776
Query: 778 EEVIGKLLPGEIFGNFCQLKGQDTLTNFMILLYRGLSGQDSEKLPFGFFDRNGKFVEVYI 837
+EVIGK+L GEIFG+FC+LKGQD LT+FMILLY G+SGQDSEK PFGF+DRNGKF+E YI
Sbjct: 777 DEVIGKMLLGEIFGSFCRLKGQDALTDFMILLYHGISGQDSEKSPFGFYDRNGKFIETYI 836
Query: 838 TASKRNDAAGNMIGCFCFLQIVSRD 862
T +KR DA+ ++IGCFCFL +V+ D
Sbjct: 837 TTNKRTDASEDIIGCFCFLHVVTED 861
>Medtr2g034040.1 | phytochrome protein B | HC |
chr2:12993536-12986584 | 20130731
Length = 1198
Score = 1152 bits (2980), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 553/857 (64%), Positives = 674/857 (78%), Gaps = 27/857 (3%)
Query: 28 KALAQFSADAENLAEFEQSGASDKSFDYSK----TVLDSPRLVSEEKMTAYLSKIQRGGL 83
KA+AQ++ DA A FEQSG SFDYS+ T + V E+++TAYL+KIQRGG
Sbjct: 46 KAIAQYTEDARLHAVFEQSG---DSFDYSQSIRLTTAAHSQSVPEQQITAYLAKIQRGGF 102
Query: 84 IQSFGCMLAIAESTFTIIGYSENCFQLLGLERHI------DSKQQLLGL-IGVDATTLFT 136
IQ FG M+A+ E +F ++ YSEN +LG+ D + G IG D +LFT
Sbjct: 103 IQPFGSMIAVDEPSFRVLAYSENARDMLGITPQSVPSLEDDDESSSSGFNIGTDVRSLFT 162
Query: 137 PPSGASLAKAVSSREISLLNPIWVYTRTTQKPFYAILHRIDVGVVIDLEPARSSDPALSL 196
SG L KA ++REISL+NPIW+++R+T KPFY ILHRIDVGVVIDLEPARS DPALS+
Sbjct: 163 HSSGVLLEKAFAAREISLMNPIWIHSRSTGKPFYGILHRIDVGVVIDLEPARSEDPALSI 222
Query: 197 AGTVQSQKLAIRASSRLQSRPGEDSGLLCDAVVEEVQKFTGYDRVMVYKFHEDDHGEVVS 256
AG VQSQKLA+RA S+LQS PG D +LCDAVVE V++ TGYDRVMVYKFHED+HGEVV+
Sbjct: 223 AGAVQSQKLAVRAISQLQSLPGGDVKVLCDAVVESVRELTGYDRVMVYKFHEDEHGEVVA 282
Query: 257 EIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCQANAVKVIQSEDLMQPLYLVN 316
E +R DLEPY+GLHYPATDIPQA+RFLFKQNRVRMI DC A+ V+V Q E L+QP+ LV
Sbjct: 283 ESKRIDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNASPVRVFQDEALVQPVCLVG 342
Query: 317 STLRAPQGCHSQYMANMGSIASLVMAVIVNGND------------TTRLWGLLVCHHTSP 364
STLRAP GCH+QYMANMGSIASL MAVI+NGND + RLWGL+VCHHTS
Sbjct: 343 STLRAPHGCHAQYMANMGSIASLAMAVIINGNDEDGVGIGGTGRNSMRLWGLVVCHHTSA 402
Query: 365 RYVPFPVRYACEFLMQAFGLQLYMEIQLAAQMAEKRILKTQTLLCDMLLRDAPFGIVTQS 424
R +PFP+RYACEFLMQAFGLQL ME+QLAAQ EKR+L+TQTLLCDMLLRD+P GIVTQS
Sbjct: 403 RCIPFPLRYACEFLMQAFGLQLNMELQLAAQSLEKRVLRTQTLLCDMLLRDSPTGIVTQS 462
Query: 425 PSIMDLVKCDGAALYYDGKCWLLGTTPTESQVKDIAEWLLVNHGDSTGLSTNSLAEAGYP 484
PSIMDLVKC+GAAL+Y G + LG TPTESQ++DI EWLL HGDSTGLST+SLA+AGYP
Sbjct: 463 PSIMDLVKCNGAALFYQGNYYPLGVTPTESQIRDIIEWLLAFHGDSTGLSTDSLADAGYP 522
Query: 485 GATSLGDPVCGMATARINSRHFLFWFRSHTAKEMKWGGAKHHPEDKDDGGKMNPRSSFKA 544
GA SLGD VCGMA A I + FLFWFRSHTAKE+KWGGAKHHPEDKDDG +M+PRSSFKA
Sbjct: 523 GAASLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKA 582
Query: 545 FLEIVKRKSLPWEVSEINAIHSLQLIMRDSFQDTQNFGPTTLNFIQKIGTAIERKGELSS 604
FLE+VK +S+ W+ +E++AIHSLQLI+RDSF++ +N + ++ ELSS
Sbjct: 583 FLEVVKSRSMQWDNAEMDAIHSLQLILRDSFKEAENNDSKAVVHTHMAELELQGVDELSS 642
Query: 605 VACEMVRLIETATVPIFGVDSDGLINGWNVQTSELTGLQASEAIGKSLVNEVVHADSRET 664
VA EMVRLIETAT PIF VD +G INGWN + SELTGL +A+GKSL++++V+ +S+ET
Sbjct: 643 VAREMVRLIETATAPIFAVDVNGRINGWNAKVSELTGLLVEDAMGKSLLHDLVYKESQET 702
Query: 665 LTNVLSRALQGEEEKNVELKIKHFGI-DQKKVVYLRANACTSRDYTNAIVGVCFVGQDIT 723
+ +LS AL+GEE+KNVE+K++ FG +Q K V++ NAC+S+DYTN IVGVCFVGQD+T
Sbjct: 703 VDKLLSHALKGEEDKNVEIKMRTFGPGNQNKAVFIVVNACSSKDYTNNIVGVCFVGQDVT 762
Query: 724 HEKVVLDKFIKLEGDYKAIIQSLNPLIPPIFASDENACCSEWNAAMEKLTGWKREEVIGK 783
+KVV+DKFI ++GDYKAI+ S N LIPPIFASD+N CC EWN AMEKL+GW R +VIGK
Sbjct: 763 GQKVVMDKFINIQGDYKAIVHSPNALIPPIFASDDNTCCLEWNNAMEKLSGWSRTDVIGK 822
Query: 784 LLPGEIFGNFCQLKGQDTLTNFMILLYRGLSGQDSEKLPFGFFDRNGKFVEVYITASKRN 843
LL GE+FG+FCQLKG D +T FMI+L+ L GQD++K PF F DR+GKFV+ ++TA+KR
Sbjct: 823 LLVGEVFGSFCQLKGSDAMTKFMIVLHNALGGQDTDKFPFSFVDRHGKFVQTFLTANKRV 882
Query: 844 DAAGNMIGCFCFLQIVS 860
+ G +IG FCFLQIVS
Sbjct: 883 NMDGQIIGAFCFLQIVS 899
>Medtr1g085160.1 | phytochrome protein A | HC |
chr1:38027094-38021769 | 20130731
Length = 1171
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/871 (53%), Positives = 605/871 (69%), Gaps = 30/871 (3%)
Query: 16 SNMNTATTSNKDKALAQFSADAENLAEFEQSGASDKSFDYSKTVL-----DSPRLVSEEK 70
S+ N+ + N + +AQ + DA+ A FE+SG+S + PR S +
Sbjct: 56 SSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGEHQPR--SNKV 113
Query: 71 MTAYLSKIQRGGLIQSFGCMLAIAESTFTIIGYSENCFQLLGLERHID---SKQQLLGLI 127
TAYL+ IQRG IQ FGC+LA+ E T +I YSEN ++L + H LG I
Sbjct: 114 TTAYLNTIQRGKQIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-I 172
Query: 128 GVDATTLFTPPSGASLAKAVSSREISLLNPIWVYTRTTQKPFYAILHRIDVGVVIDLEPA 187
G D T+FT PS ++L KA+ E+SLLNPI V+ +T+ KPFYAI+HR+ ++ID EP
Sbjct: 173 GTDIRTIFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPV 232
Query: 188 RSSDPALSLAGTVQSQKLAIRASSRLQSRPGEDSGLLCDAVVEEVQKFTGYDRVMVYKFH 247
+ + ++ AG +QS KLA +A +RLQS P LCD +V+EV + TGYDRVM YKFH
Sbjct: 233 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFH 292
Query: 248 EDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCQANAVKVIQSED 307
EDDHGEV++E+ ++ LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A VKV+Q E
Sbjct: 293 EDDHGEVIAEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKVLQDEK 352
Query: 308 LMQPLYLVNSTLRAPQGCHSQYMANMGSIASLVMAVIVNGND-------------TTRLW 354
L L L STLRAP CH QYMANM SIASLVMAV+VN +D RLW
Sbjct: 353 LPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKKKRLW 412
Query: 355 GLLVCHHTSPRYVPFPVRYACEFLMQAFGLQLYMEIQLAAQMAEKRILKTQTLLCDMLLR 414
GL+VCH+T+PR+VPFP+RYACEFL Q F + + EI+L Q+ EK IL+TQTLLCDML+R
Sbjct: 413 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEFQILEKNILRTQTLLCDMLMR 472
Query: 415 DAPFGIVTQSPSIMDLVKCDGAALYYDGKCWLLGTTPTESQVKDIAEWLLVNHGDSTGLS 474
DAP GIV+QSP+IMDLVKCDGAAL Y K W+LG TP+E Q+++IA W+ H DSTGLS
Sbjct: 473 DAPLGIVSQSPNIMDLVKCDGAALLYRNKLWILGATPSEPQIREIALWMSEYHTDSTGLS 532
Query: 475 TNSLAEAGYPGATSLGDPVCGMATARINSRHFLFWFRSHTAKEMKWGGAKHHPEDKDDGG 534
T+SL++AG+PGA L D VCGMA RI S+ +FWFRSHTA E++WGGAKH P ++DDG
Sbjct: 533 TDSLSDAGFPGALKLNDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQDDGR 592
Query: 535 KMNPRSSFKAFLEIVKRKSLPWEVSEINAIHSLQLIMRDSFQDTQNFGPTTLNFIQKIG- 593
KM+PRSSFKAFLE+VK +S+PW+ E++AIHSLQLI+R++ +DT + ++
Sbjct: 593 KMHPRSSFKAFLEVVKARSIPWKDFEMDAIHSLQLILRNASKDTDMIDLNSKAINTRLND 652
Query: 594 TAIERKGELSSVACEMVRLIETATVPIFGVDSDGLINGWNVQTSELTGLQASEAIGKSLV 653
IE EL +V EMVRLIETATVPI VD DG++NGWN++ SELTGL EAIGK L+
Sbjct: 653 LKIEGMQELEAVTSEMVRLIETATVPILAVDVDGMVNGWNIKISELTGLPVGEAIGKHLL 712
Query: 654 NEVVHADSRETLTNVLSRALQGEEEKNVELKIKHFGIDQK-KVVYLRANACTSRDYTNAI 712
+V S + + +L+ ALQG+EEKNV+ +IK G + L NAC SRD +
Sbjct: 713 T-LVEDSSTDIVKKMLNLALQGQEEKNVQFEIKTHGSKTDCGPISLIVNACASRDLHENV 771
Query: 713 VGVCFVGQDITHEKVVLDKFIKLEGDYKAIIQSLNPLIPPIFASDENACCSEWNAAMEKL 772
VGVCFV QDIT +K V+DKF ++EGDYKAI+Q+ N LIPPIF +DE C EWNAAM K+
Sbjct: 772 VGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAAMIKI 831
Query: 773 TGWKREEVIGKLLPGEIFGNF---CQLKGQDTLTNFMILLYRGLSGQDSEKLPFGFFDRN 829
TGWKREEV+ K+L GE+FG C+LK Q+ NF I+L + ++G ++EK+PFGF R
Sbjct: 832 TGWKREEVMDKMLLGEVFGTHMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFGFLSRK 891
Query: 830 GKFVEVYITASKRNDAAGNMIGCFCFLQIVS 860
GK+VE ++ SK+ DA G + G FCFLQ+ S
Sbjct: 892 GKYVECLLSVSKKIDAEGLVTGVFCFLQLAS 922
>Medtr1g085160.3 | phytochrome protein A | HC |
chr1:38026874-38021654 | 20130731
Length = 1124
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/871 (53%), Positives = 605/871 (69%), Gaps = 30/871 (3%)
Query: 16 SNMNTATTSNKDKALAQFSADAENLAEFEQSGASDKSFDYSKTVL-----DSPRLVSEEK 70
S+ N+ + N + +AQ + DA+ A FE+SG+S + PR S +
Sbjct: 9 SSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGEHQPR--SNKV 66
Query: 71 MTAYLSKIQRGGLIQSFGCMLAIAESTFTIIGYSENCFQLLGLERHID---SKQQLLGLI 127
TAYL+ IQRG IQ FGC+LA+ E T +I YSEN ++L + H LG I
Sbjct: 67 TTAYLNTIQRGKQIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-I 125
Query: 128 GVDATTLFTPPSGASLAKAVSSREISLLNPIWVYTRTTQKPFYAILHRIDVGVVIDLEPA 187
G D T+FT PS ++L KA+ E+SLLNPI V+ +T+ KPFYAI+HR+ ++ID EP
Sbjct: 126 GTDIRTIFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPV 185
Query: 188 RSSDPALSLAGTVQSQKLAIRASSRLQSRPGEDSGLLCDAVVEEVQKFTGYDRVMVYKFH 247
+ + ++ AG +QS KLA +A +RLQS P LCD +V+EV + TGYDRVM YKFH
Sbjct: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFH 245
Query: 248 EDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCQANAVKVIQSED 307
EDDHGEV++E+ ++ LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A VKV+Q E
Sbjct: 246 EDDHGEVIAEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKVLQDEK 305
Query: 308 LMQPLYLVNSTLRAPQGCHSQYMANMGSIASLVMAVIVNGND-------------TTRLW 354
L L L STLRAP CH QYMANM SIASLVMAV+VN +D RLW
Sbjct: 306 LPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKKKRLW 365
Query: 355 GLLVCHHTSPRYVPFPVRYACEFLMQAFGLQLYMEIQLAAQMAEKRILKTQTLLCDMLLR 414
GL+VCH+T+PR+VPFP+RYACEFL Q F + + EI+L Q+ EK IL+TQTLLCDML+R
Sbjct: 366 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEFQILEKNILRTQTLLCDMLMR 425
Query: 415 DAPFGIVTQSPSIMDLVKCDGAALYYDGKCWLLGTTPTESQVKDIAEWLLVNHGDSTGLS 474
DAP GIV+QSP+IMDLVKCDGAAL Y K W+LG TP+E Q+++IA W+ H DSTGLS
Sbjct: 426 DAPLGIVSQSPNIMDLVKCDGAALLYRNKLWILGATPSEPQIREIALWMSEYHTDSTGLS 485
Query: 475 TNSLAEAGYPGATSLGDPVCGMATARINSRHFLFWFRSHTAKEMKWGGAKHHPEDKDDGG 534
T+SL++AG+PGA L D VCGMA RI S+ +FWFRSHTA E++WGGAKH P ++DDG
Sbjct: 486 TDSLSDAGFPGALKLNDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQDDGR 545
Query: 535 KMNPRSSFKAFLEIVKRKSLPWEVSEINAIHSLQLIMRDSFQDTQNFGPTTLNFIQKIG- 593
KM+PRSSFKAFLE+VK +S+PW+ E++AIHSLQLI+R++ +DT + ++
Sbjct: 546 KMHPRSSFKAFLEVVKARSIPWKDFEMDAIHSLQLILRNASKDTDMIDLNSKAINTRLND 605
Query: 594 TAIERKGELSSVACEMVRLIETATVPIFGVDSDGLINGWNVQTSELTGLQASEAIGKSLV 653
IE EL +V EMVRLIETATVPI VD DG++NGWN++ SELTGL EAIGK L+
Sbjct: 606 LKIEGMQELEAVTSEMVRLIETATVPILAVDVDGMVNGWNIKISELTGLPVGEAIGKHLL 665
Query: 654 NEVVHADSRETLTNVLSRALQGEEEKNVELKIKHFGIDQK-KVVYLRANACTSRDYTNAI 712
+V S + + +L+ ALQG+EEKNV+ +IK G + L NAC SRD +
Sbjct: 666 T-LVEDSSTDIVKKMLNLALQGQEEKNVQFEIKTHGSKTDCGPISLIVNACASRDLHENV 724
Query: 713 VGVCFVGQDITHEKVVLDKFIKLEGDYKAIIQSLNPLIPPIFASDENACCSEWNAAMEKL 772
VGVCFV QDIT +K V+DKF ++EGDYKAI+Q+ N LIPPIF +DE C EWNAAM K+
Sbjct: 725 VGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAAMIKI 784
Query: 773 TGWKREEVIGKLLPGEIFGNF---CQLKGQDTLTNFMILLYRGLSGQDSEKLPFGFFDRN 829
TGWKREEV+ K+L GE+FG C+LK Q+ NF I+L + ++G ++EK+PFGF R
Sbjct: 785 TGWKREEVMDKMLLGEVFGTHMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFGFLSRK 844
Query: 830 GKFVEVYITASKRNDAAGNMIGCFCFLQIVS 860
GK+VE ++ SK+ DA G + G FCFLQ+ S
Sbjct: 845 GKYVECLLSVSKKIDAEGLVTGVFCFLQLAS 875
>Medtr1g085160.2 | phytochrome protein A | HC |
chr1:38026874-38021654 | 20130731
Length = 1124
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/871 (53%), Positives = 605/871 (69%), Gaps = 30/871 (3%)
Query: 16 SNMNTATTSNKDKALAQFSADAENLAEFEQSGASDKSFDYSKTVL-----DSPRLVSEEK 70
S+ N+ + N + +AQ + DA+ A FE+SG+S + PR S +
Sbjct: 9 SSNNSGRSRNSARIIAQTTVDAKLHATFEESGSSFDYSSSVRVSGSVDGEHQPR--SNKV 66
Query: 71 MTAYLSKIQRGGLIQSFGCMLAIAESTFTIIGYSENCFQLLGLERHID---SKQQLLGLI 127
TAYL+ IQRG IQ FGC+LA+ E T +I YSEN ++L + H LG I
Sbjct: 67 TTAYLNTIQRGKQIQPFGCLLALDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHPALG-I 125
Query: 128 GVDATTLFTPPSGASLAKAVSSREISLLNPIWVYTRTTQKPFYAILHRIDVGVVIDLEPA 187
G D T+FT PS ++L KA+ E+SLLNPI V+ +T+ KPFYAI+HR+ ++ID EP
Sbjct: 126 GTDIRTIFTAPSASALQKALGFAEVSLLNPILVHCKTSGKPFYAIIHRVTGSLIIDFEPV 185
Query: 188 RSSDPALSLAGTVQSQKLAIRASSRLQSRPGEDSGLLCDAVVEEVQKFTGYDRVMVYKFH 247
+ + ++ AG +QS KLA +A +RLQS P LCD +V+EV + TGYDRVM YKFH
Sbjct: 186 KPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFH 245
Query: 248 EDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCQANAVKVIQSED 307
EDDHGEV++E+ ++ LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A VKV+Q E
Sbjct: 246 EDDHGEVIAEVTKTGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCHAKHVKVLQDEK 305
Query: 308 LMQPLYLVNSTLRAPQGCHSQYMANMGSIASLVMAVIVNGND-------------TTRLW 354
L L L STLRAP CH QYMANM SIASLVMAV+VN +D RLW
Sbjct: 306 LPFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNDSDEDGDSADAVLPQKKKRLW 365
Query: 355 GLLVCHHTSPRYVPFPVRYACEFLMQAFGLQLYMEIQLAAQMAEKRILKTQTLLCDMLLR 414
GL+VCH+T+PR+VPFP+RYACEFL Q F + + EI+L Q+ EK IL+TQTLLCDML+R
Sbjct: 366 GLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEIELEFQILEKNILRTQTLLCDMLMR 425
Query: 415 DAPFGIVTQSPSIMDLVKCDGAALYYDGKCWLLGTTPTESQVKDIAEWLLVNHGDSTGLS 474
DAP GIV+QSP+IMDLVKCDGAAL Y K W+LG TP+E Q+++IA W+ H DSTGLS
Sbjct: 426 DAPLGIVSQSPNIMDLVKCDGAALLYRNKLWILGATPSEPQIREIALWMSEYHTDSTGLS 485
Query: 475 TNSLAEAGYPGATSLGDPVCGMATARINSRHFLFWFRSHTAKEMKWGGAKHHPEDKDDGG 534
T+SL++AG+PGA L D VCGMA RI S+ +FWFRSHTA E++WGGAKH P ++DDG
Sbjct: 486 TDSLSDAGFPGALKLNDTVCGMAAVRITSKDIVFWFRSHTAAEIRWGGAKHEPGEQDDGR 545
Query: 535 KMNPRSSFKAFLEIVKRKSLPWEVSEINAIHSLQLIMRDSFQDTQNFGPTTLNFIQKIG- 593
KM+PRSSFKAFLE+VK +S+PW+ E++AIHSLQLI+R++ +DT + ++
Sbjct: 546 KMHPRSSFKAFLEVVKARSIPWKDFEMDAIHSLQLILRNASKDTDMIDLNSKAINTRLND 605
Query: 594 TAIERKGELSSVACEMVRLIETATVPIFGVDSDGLINGWNVQTSELTGLQASEAIGKSLV 653
IE EL +V EMVRLIETATVPI VD DG++NGWN++ SELTGL EAIGK L+
Sbjct: 606 LKIEGMQELEAVTSEMVRLIETATVPILAVDVDGMVNGWNIKISELTGLPVGEAIGKHLL 665
Query: 654 NEVVHADSRETLTNVLSRALQGEEEKNVELKIKHFGIDQK-KVVYLRANACTSRDYTNAI 712
+V S + + +L+ ALQG+EEKNV+ +IK G + L NAC SRD +
Sbjct: 666 T-LVEDSSTDIVKKMLNLALQGQEEKNVQFEIKTHGSKTDCGPISLIVNACASRDLHENV 724
Query: 713 VGVCFVGQDITHEKVVLDKFIKLEGDYKAIIQSLNPLIPPIFASDENACCSEWNAAMEKL 772
VGVCFV QDIT +K V+DKF ++EGDYKAI+Q+ N LIPPIF +DE C EWNAAM K+
Sbjct: 725 VGVCFVAQDITAQKTVMDKFTRIEGDYKAIVQNPNQLIPPIFGTDEFGWCCEWNAAMIKI 784
Query: 773 TGWKREEVIGKLLPGEIFGNF---CQLKGQDTLTNFMILLYRGLSGQDSEKLPFGFFDRN 829
TGWKREEV+ K+L GE+FG C+LK Q+ NF I+L + ++G ++EK+PFGF R
Sbjct: 785 TGWKREEVMDKMLLGEVFGTHMSCCRLKNQEAFVNFGIVLNKAMTGLETEKVPFGFLSRK 844
Query: 830 GKFVEVYITASKRNDAAGNMIGCFCFLQIVS 860
GK+VE ++ SK+ DA G + G FCFLQ+ S
Sbjct: 845 GKYVECLLSVSKKIDAEGLVTGVFCFLQLAS 875