Miyakogusa Predicted Gene

Lj4g3v2295500.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2295500.1 Non Characterized Hit- tr|C5XWB9|C5XWB9_SORBI
Putative uncharacterized protein Sb04g024210
OS=Sorghu,37.5,2e-19,seg,NULL,
NODE_57364_length_565_cov_90.143364.path1.1
         (152 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g049140.1 | MLP3.9 protein | HC | chr2:21664759-21659777 |...   194   4e-50
Medtr2g049140.2 | MLP3.9 protein | HC | chr2:21664736-21659780 |...   194   4e-50

>Medtr2g049140.1 | MLP3.9 protein | HC | chr2:21664759-21659777 |
           20130731
          Length = 238

 Score =  194 bits (492), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 99/152 (65%), Positives = 114/152 (75%), Gaps = 4/152 (2%)

Query: 1   MKVAPTVVFLFRDTQGGFVSAISEALHPNPSSSFTRLEDSFELSLEGYGIKDLKASGNVI 60
           MK+AP  VF+FRD++G F SAIS+AL    SSSFTRLEDSFELSLEGYGIKD KASGNV+
Sbjct: 1   MKLAPITVFMFRDSEG-FASAISQALS---SSSFTRLEDSFELSLEGYGIKDHKASGNVL 56

Query: 61  HHVDNHGIYQVSVVVMQHYEPPVLACALNEVLNEIAGDKXXXXXXXXXXXXXXXXKVKGQ 120
           H++DNH  Y+VS+V+MQHYEPPVLACALNEVLN+I G                  KVKG 
Sbjct: 57  HYLDNHRSYKVSIVIMQHYEPPVLACALNEVLNKIVGGDPSSMPTLLVPFLVESSKVKGN 116

Query: 121 SKSLRSDEGKPLILGIQVGQSTDVMQALLKKT 152
           SKSLRSDE + L  GIQ+GQ T+ MQ LLKKT
Sbjct: 117 SKSLRSDESRALTYGIQIGQITETMQTLLKKT 148


>Medtr2g049140.2 | MLP3.9 protein | HC | chr2:21664736-21659780 |
           20130731
          Length = 238

 Score =  194 bits (492), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 99/152 (65%), Positives = 114/152 (75%), Gaps = 4/152 (2%)

Query: 1   MKVAPTVVFLFRDTQGGFVSAISEALHPNPSSSFTRLEDSFELSLEGYGIKDLKASGNVI 60
           MK+AP  VF+FRD++G F SAIS+AL    SSSFTRLEDSFELSLEGYGIKD KASGNV+
Sbjct: 1   MKLAPITVFMFRDSEG-FASAISQALS---SSSFTRLEDSFELSLEGYGIKDHKASGNVL 56

Query: 61  HHVDNHGIYQVSVVVMQHYEPPVLACALNEVLNEIAGDKXXXXXXXXXXXXXXXXKVKGQ 120
           H++DNH  Y+VS+V+MQHYEPPVLACALNEVLN+I G                  KVKG 
Sbjct: 57  HYLDNHRSYKVSIVIMQHYEPPVLACALNEVLNKIVGGDPSSMPTLLVPFLVESSKVKGN 116

Query: 121 SKSLRSDEGKPLILGIQVGQSTDVMQALLKKT 152
           SKSLRSDE + L  GIQ+GQ T+ MQ LLKKT
Sbjct: 117 SKSLRSDESRALTYGIQIGQITETMQTLLKKT 148