Miyakogusa Predicted Gene

Lj4g3v2290280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2290280.1 Non Characterized Hit- tr|H3GI31|H3GI31_PHYRM
Uncharacterized protein OS=Phytophthora ramorum
GN=fge,36.73,0.000000000000002,Tetratricopeptide
repeats,Tetratricopeptide repeat; TPR,Tetratricopeptide repeat;
TPR_REGION,Tetratr,CUFF.50708.1
         (477 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g120360.1 | TPR repeat protein | HC | chr4:49898147-499013...   370   e-102
Medtr7g059150.3 | heat shock protein 70 (HSP70)-interacting prot...    69   9e-12
Medtr7g059150.2 | heat shock protein 70 (HSP70)-interacting prot...    69   9e-12
Medtr7g059150.1 | heat shock protein 70 (HSP70)-interacting prot...    69   9e-12
Medtr7g059150.4 | heat shock protein 70 (HSP70)-interacting prot...    69   9e-12
Medtr7g059150.5 | heat shock protein 70 (HSP70)-interacting prot...    69   9e-12
Medtr2g090135.1 | heat shock protein 70 (HSP70)-interacting prot...    67   4e-11
Medtr8g107280.1 | translocon at the outer membrane ofs-like prot...    55   1e-07
Medtr8g012340.1 | peptidyl-prolyl cis-trans isomerase FKBP62-lik...    55   1e-07
Medtr2g067870.1 | heat shock protein 70 (HSP70)-interacting prot...    53   7e-07
Medtr8g080980.1 | peptidyl-prolyl cis-trans isomerase FKBP62-lik...    51   2e-06

>Medtr4g120360.1 | TPR repeat protein | HC | chr4:49898147-49901301
           | 20130731
          Length = 467

 Score =  370 bits (949), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 240/492 (48%), Positives = 261/492 (53%), Gaps = 40/492 (8%)

Query: 1   MNSNYGRSNSNPQKTASSSPSVSLNNFNFDFDLGIGSNRPKSLIDQKXXXXXXXXXXXXX 60
           MNSNYG+ N   Q +AS      LNNFNFD DLGIGSNR KSL DQK             
Sbjct: 1   MNSNYGKPNPPKQSSAS------LNNFNFDLDLGIGSNRSKSLKDQKTPNPPSNSYSTPS 54

Query: 61  XXXXXXXXQSKKPSWTHXXXXXXX--XXXXXSMAGDIFGKSWGSAQPSAPTIGIVNKNPN 118
                   Q KK  WTH              SM GDIFGKSWGS QPS P+IGIVNKNPN
Sbjct: 55  YSSA----QPKK--WTHQPVQTPAGLPGAPPSMVGDIFGKSWGSTQPSGPSIGIVNKNPN 108

Query: 119 LFGDLVXXXXXXXXXXXXXXTNVPLKNAASTTKTTSFSMGNMANSLPKTGNAPQXXX--- 175
           LFGDLV              +NVPLKNA  T K +SFSM NM+NSLPK  N  Q      
Sbjct: 109 LFGDLVTSALGQGSSNN---SNVPLKNAIPTPKNSSFSMSNMSNSLPKPVNTLQSGSSLG 165

Query: 176 ----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDPFSSLGVGIGTXXXXXX 225
                                                    KDPFSSL  G G+      
Sbjct: 166 SSSGSGFNLNANRSPNIGGPSIRSGVGVAASGSGIGISSSNKDPFSSL-AGFGSKPSSSL 224

Query: 226 XXXXXXXXXXXXIEKDDDGFGDFQNXXXXXXXXXXXXXXXXXINFDFTGSTASSNRSPAQ 285
                       I+  DDGFGDFQN                 I+ DFTGS+A SN +P Q
Sbjct: 225 NSAAKPSK----IDSQDDGFGDFQNATKPSTNAFPSSGGSVGIDVDFTGSSAFSNPTPVQ 280

Query: 286 ASGGGDPMDMFFTXXXXXXXXXXXXXXXXXXXXEMDDWGMDSEFXXXXXXXXXXXXXXXX 345
           ASGG DPMDMFFT                    E+DDWG  +EF                
Sbjct: 281 ASGG-DPMDMFFTSTTPSSGGGGGGGAAASS--EIDDWG--NEFGGGNHDVGGTTTELDG 335

Query: 346 XXXXXXXXXXXXXXXXXMDNYKQGQFADAIKWLSWAVILLEKAGDDAGSVEVLSCRASCY 405
                            MDNYKQGQFADAIKWLSWA+ILLEKAGD AG+VEVLSCRASCY
Sbjct: 336 LPPPPAGISGSSAKGKGMDNYKQGQFADAIKWLSWALILLEKAGDGAGTVEVLSCRASCY 395

Query: 406 KEVGEYKKAVADCTKILENNETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVA 465
           KEVGEYKKAVADCTK++ N+E NVSVLVQRALLYESMEKYKLGAEDLR VLK DP+NRVA
Sbjct: 396 KEVGEYKKAVADCTKVIGNDEKNVSVLVQRALLYESMEKYKLGAEDLRTVLKFDPTNRVA 455

Query: 466 RSTIHRLVKMAD 477
           RST+HRL KMA+
Sbjct: 456 RSTVHRLAKMAE 467


>Medtr7g059150.3 | heat shock protein 70 (HSP70)-interacting
           protein, putative | HC | chr7:21365965-21361452 |
           20130731
          Length = 267

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 7/112 (6%)

Query: 369 GQFADAIKWLSWAVILLEKAGDDAGSVEVLS-C---RASCYKEVGEYKKAVADCTKILEN 424
           G++ +A+     A   L+ A D   SVE+ S C   RA C+ ++G+Y+  + +CTK LE 
Sbjct: 109 GKYEEALSQYEHA---LQVAPDMPSSVEIRSICHANRAVCFMKLGKYENTIKECTKALEL 165

Query: 425 NETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRLVKMA 476
           N   V  LV+R   +E +E ++    D++ +L+IDPSN  A  +I RL  +A
Sbjct: 166 NPAYVKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNGQAGKSIRRLEPLA 217


>Medtr7g059150.2 | heat shock protein 70 (HSP70)-interacting
           protein, putative | HC | chr7:21365965-21361452 |
           20130731
          Length = 267

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 7/112 (6%)

Query: 369 GQFADAIKWLSWAVILLEKAGDDAGSVEVLS-C---RASCYKEVGEYKKAVADCTKILEN 424
           G++ +A+     A   L+ A D   SVE+ S C   RA C+ ++G+Y+  + +CTK LE 
Sbjct: 109 GKYEEALSQYEHA---LQVAPDMPSSVEIRSICHANRAVCFMKLGKYENTIKECTKALEL 165

Query: 425 NETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRLVKMA 476
           N   V  LV+R   +E +E ++    D++ +L+IDPSN  A  +I RL  +A
Sbjct: 166 NPAYVKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNGQAGKSIRRLEPLA 217


>Medtr7g059150.1 | heat shock protein 70 (HSP70)-interacting
           protein, putative | HC | chr7:21365965-21361471 |
           20130731
          Length = 267

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 7/112 (6%)

Query: 369 GQFADAIKWLSWAVILLEKAGDDAGSVEVLS-C---RASCYKEVGEYKKAVADCTKILEN 424
           G++ +A+     A   L+ A D   SVE+ S C   RA C+ ++G+Y+  + +CTK LE 
Sbjct: 109 GKYEEALSQYEHA---LQVAPDMPSSVEIRSICHANRAVCFMKLGKYENTIKECTKALEL 165

Query: 425 NETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRLVKMA 476
           N   V  LV+R   +E +E ++    D++ +L+IDPSN  A  +I RL  +A
Sbjct: 166 NPAYVKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNGQAGKSIRRLEPLA 217


>Medtr7g059150.4 | heat shock protein 70 (HSP70)-interacting
           protein, putative | HC | chr7:21365965-21361471 |
           20130731
          Length = 267

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 7/112 (6%)

Query: 369 GQFADAIKWLSWAVILLEKAGDDAGSVEVLS-C---RASCYKEVGEYKKAVADCTKILEN 424
           G++ +A+     A   L+ A D   SVE+ S C   RA C+ ++G+Y+  + +CTK LE 
Sbjct: 109 GKYEEALSQYEHA---LQVAPDMPSSVEIRSICHANRAVCFMKLGKYENTIKECTKALEL 165

Query: 425 NETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRLVKMA 476
           N   V  LV+R   +E +E ++    D++ +L+IDPSN  A  +I RL  +A
Sbjct: 166 NPAYVKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNGQAGKSIRRLEPLA 217


>Medtr7g059150.5 | heat shock protein 70 (HSP70)-interacting
           protein, putative | HC | chr7:21365965-21361471 |
           20130731
          Length = 267

 Score = 68.9 bits (167), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 7/112 (6%)

Query: 369 GQFADAIKWLSWAVILLEKAGDDAGSVEVLS-C---RASCYKEVGEYKKAVADCTKILEN 424
           G++ +A+     A   L+ A D   SVE+ S C   RA C+ ++G+Y+  + +CTK LE 
Sbjct: 109 GKYEEALSQYEHA---LQVAPDMPSSVEIRSICHANRAVCFMKLGKYENTIKECTKALEL 165

Query: 425 NETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRLVKMA 476
           N   V  LV+R   +E +E ++    D++ +L+IDPSN  A  +I RL  +A
Sbjct: 166 NPAYVKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNGQAGKSIRRLEPLA 217


>Medtr2g090135.1 | heat shock protein 70 (HSP70)-interacting
           protein, putative | HC | chr2:38215432-38221263 |
           20130731
          Length = 270

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 6/112 (5%)

Query: 371 FADAI--KWLSWAVILLEKAGDDAGSVEVLS-CRAS---CYKEVGEYKKAVADCTKILEN 424
           F DA   + L+   + LE A D   SVE+ S C A+   C+ ++G+Y+  V +CTK LE 
Sbjct: 109 FVDAKYEEALTQYELALEVAPDMPSSVEIRSICHANRGVCFLKMGKYENTVKECTKALEL 168

Query: 425 NETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRLVKMA 476
           N   V  LV+R   +E +E ++    D++ +L+IDPSN  A   I RL  +A
Sbjct: 169 NPMYVKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQAGKAIRRLEPLA 220


>Medtr8g107280.1 | translocon at the outer membrane ofs-like protein
           | HC | chr8:45327392-45334135 | 20130731
          Length = 594

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 6/110 (5%)

Query: 366 YKQGQFADAIKWLSWAVILLEKAGDDAGSVEVLSCRASCYKEVGEYKKAVADCTKILENN 425
           YK  Q+  AI + + A+ L    G++A      S RA  Y E+G Y +A ADCTK +  +
Sbjct: 490 YKDKQWQKAIGFYTEAIKL---CGNNA---TYYSNRAQAYLELGSYLQAEADCTKAISLD 543

Query: 426 ETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRLVKM 475
           + +V    +R    E +  YK   +D +  L ++P+N+ A S   RL K+
Sbjct: 544 KKSVKAYFRRGTAREMLGYYKEAIDDFKYALVLEPTNKRAASAAERLRKL 593


>Medtr8g012340.1 | peptidyl-prolyl cis-trans isomerase FKBP62-like
           protein | HC | chr8:3497984-3493093 | 20130731
          Length = 575

 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 9/107 (8%)

Query: 366 YKQGQFADAIKWLSWAVILLEK----AGDDAGSVEVL--SCR---ASCYKEVGEYKKAVA 416
           +K G++A A K    AV  +E       +   S + L  +C    A+C  ++ +YK+A  
Sbjct: 413 FKTGKYAKASKRYEKAVKFIEYDTSYTDEQKKSAKALKIACNLNDAACKLKLKDYKQAEK 472

Query: 417 DCTKILENNETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNR 463
            CTK+LE   TNV  L +RA  Y  +  + L   D++  L+IDP+NR
Sbjct: 473 LCTKVLEFESTNVKALYRRAQAYIQLADFDLAEFDIKKALEIDPNNR 519


>Medtr2g067870.1 | heat shock protein 70 (HSP70)-interacting
           protein, putative | HC | chr2:28413128-28411372 |
           20130731
          Length = 121

 Score = 52.8 bits (125), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 62/107 (57%), Gaps = 3/107 (2%)

Query: 366 YKQGQFADAIKWLSWAVILLEKAGDDAGSVEVLSCRASCYKEVGEYKKAVADCTKILENN 425
           Y+ G + +A+ + + A+++   A  +   + + S RA+C+ ++ ++KKA  +CT +LE +
Sbjct: 13  YRDGLYKEALAFYTDAIVM---AKTNPQKIALHSNRAACFLKLHDFKKAAEECTSVLELD 69

Query: 426 ETNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNRVARSTIHRL 472
             +   L+ RA    ++++Y     D+  +L+++PS+ V ++   RL
Sbjct: 70  SNHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLHARL 116


>Medtr8g080980.1 | peptidyl-prolyl cis-trans isomerase FKBP62-like
           protein | HC | chr8:34977709-34974074 | 20130731
          Length = 570

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 4/97 (4%)

Query: 370 QFADAIKWLSWAVILLEKAGDDAGSVEVLSCR---ASCYKEVGEYKKAVADCTKILENNE 426
           ++  AI++  +     ++    A ++++ SC    A+C  ++ +YK+A   CTK+LE + 
Sbjct: 420 RYEKAIRYFEYDSSFSDEEKQQAKALKI-SCNLNDAACKLKLKDYKQAEKLCTKVLELDS 478

Query: 427 TNVSVLVQRALLYESMEKYKLGAEDLRNVLKIDPSNR 463
            NV  L +RA  Y  +    L   D++  L+IDP NR
Sbjct: 479 RNVKALYRRAQAYIHLIDLDLAEMDIKKALEIDPDNR 515