Miyakogusa Predicted Gene

Lj4g3v2289100.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2289100.1 Non Characterized Hit- tr|H3AWU6|H3AWU6_LATCH
Uncharacterized protein OS=Latimeria chalumnae
GN=WDR4,22.86,3e-18,Quinoprotein alcohol
dehydrogenase-like,Quinonprotein alcohol dehydrogenase-like; WD40,WD40
repeat; ,CUFF.50860.1
         (616 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g120740.1 | transducin family protein/WD-40 repeat protein...   894   0.0  
Medtr4g011300.1 | transducin family protein/WD-40 repeat protein...   165   1e-40
Medtr4g011300.2 | transducin family protein/WD-40 repeat protein...   165   1e-40
Medtr3g052220.1 | transducin/WD-like repeat-protein | HC | chr3:...    55   2e-07

>Medtr4g120740.1 | transducin family protein/WD-40 repeat protein |
           HC | chr4:49986451-49996350 | 20130731
          Length = 625

 Score =  894 bits (2309), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 445/592 (75%), Positives = 492/592 (83%), Gaps = 3/592 (0%)

Query: 1   MASTPDIRGILTAFNPSLDLFAVTAGDGRIKIWDTLKGQLQNEFADITSTHAATI-ALKG 59
           MA++ DIRGILTAFNPSLD FA++ GDGRIKIWD LKGQ+Q EFADITSTH   I   KG
Sbjct: 1   MAASADIRGILTAFNPSLDFFAISTGDGRIKIWDALKGQVQTEFADITSTHETNIFDQKG 60

Query: 60  HLSVDYTCIHWFSFERKRKRKHTSSLLVLGTGSG-DVLALDVAAGQLAWRIADCHPGGVR 118
           HLSVDYTCI W SF+ KRKRKH+SS L+L      DVLALDV+AGQL+W+I DCHPGGVR
Sbjct: 61  HLSVDYTCIKWLSFQSKRKRKHSSSSLLLLGTGSGDVLALDVSAGQLSWKINDCHPGGVR 120

Query: 119 AISSSANGSSIYTAGADGMVCVIDFMSGNLLEKFKASTKAVSCMSVSSDGKTLATASAQL 178
           AISS ANGS+ YTAGADGM+C  DF +G LLEKFKAS+KAVSC+SVS DGK LATA+AQL
Sbjct: 121 AISSLANGSTFYTAGADGMICATDFSTGKLLEKFKASSKAVSCISVSPDGKKLATAAAQL 180

Query: 179 KIFNCSNHKKIQKLSGHPGPVRCMVFTEDDKYILSSAVGERYVAVWRVDGAKKQSASCVL 238
           KIFNCSN KKIQK SGHPG VRCMVFTED KYILSSAVGERYVAVW +DG+KKQSASCVL
Sbjct: 181 KIFNCSNKKKIQKCSGHPGSVRCMVFTEDSKYILSSAVGERYVAVWSIDGSKKQSASCVL 240

Query: 239 AMEHPAVFLDSRCIDRGEDDEAGICVLAISEVGLCYLWFGNSIEELRDAKPTKISLSLED 298
           AMEHPAVFLDSRCID+GE DEAGICVLAISE GLCYLWFGNSIEELR+AKPTKISLS ED
Sbjct: 241 AMEHPAVFLDSRCIDKGEHDEAGICVLAISEAGLCYLWFGNSIEELRNAKPTKISLSSED 300

Query: 299 ISSRNFKGALPAIYAAKLQGIQKPASGQVFLVHGSLVKPSFQKILLHSGTDIKLNVSHDG 358
           +S++N+KGALPAIYAA LQ  QKPASGQVFLV+G LVKPSFQ I +HSG D+KL+VS DG
Sbjct: 301 MSTKNYKGALPAIYAANLQSTQKPASGQVFLVYGMLVKPSFQNIPVHSGADVKLSVSRDG 360

Query: 359 VLLPTSQVLAKTKKGTGVQRVTALDRANAEDALLPIPKVFDSHXXXXXXXXXXXXXVIHD 418
           VLLP SQ   K+K  T VQRVTALDRANAEDALLPIPKVFDS              V+ D
Sbjct: 361 VLLPKSQSRLKSKNRTDVQRVTALDRANAEDALLPIPKVFDSREKEESFQDSLDKDVMDD 420

Query: 419 SLRSSKADFLEIEDDMVQDEIDVTCMEDRMRSLGMLKSESDCASNFELCSSLLKGIDLEA 478
              S  AD +EI+D +VQ E ++  MEDRMRSLG+L +ESDCASNFELCS LLKGIDLE+
Sbjct: 421 LFTSGIADSMEIDDGIVQSETNIISMEDRMRSLGLLYNESDCASNFELCSKLLKGIDLES 480

Query: 479 TLPMKKIRAAVLSMVPSEVFKLLEVLLATWQSRSSSGKYVLPWIYSILVNHGHNIIAQES 538
            LP KK+RAAVLS+ PSE FKLLEVLLA WQSRSS  +YVLPW+YSILV HGHN  A+ES
Sbjct: 481 ILPKKKVRAAVLSIEPSEAFKLLEVLLAIWQSRSSRREYVLPWMYSILVTHGHN-AAEES 539

Query: 539 GPRLLDSLHKITNSRGCALQPLLQLSGRLQLVTSQIDKASQTISHLVHDPQT 590
              +LDS++KITNSRG  LQ LLQLSGRLQLVTSQIDKASQ ISH VHD QT
Sbjct: 540 VTHMLDSVYKITNSRGATLQSLLQLSGRLQLVTSQIDKASQRISHSVHDIQT 591


>Medtr4g011300.1 | transducin family protein/WD-40 repeat protein,
           putative | HC | chr4:2703522-2695734 | 20130731
          Length = 620

 Score =  165 bits (418), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 153/592 (25%), Positives = 264/592 (44%), Gaps = 68/592 (11%)

Query: 10  ILTAFNPSLDLFAVTAGDGRIKIWDTLKGQLQNEFADITSTHAATIALKGHLSVDYTCIH 69
           +LTAF P+ D  A+ + +G  KIW+T  G L  E+      H           + Y+CI 
Sbjct: 10  VLTAFTPNGDYAAILSANGTAKIWNTNSGDLLAEWKPSDGDH----------DIRYSCIA 59

Query: 70  WFSFERKRKRKHTSSLLVLGTGSGDVLALDVAAGQLAWRIADCHPGGVRAISSSANGSSI 129
                +KRK+     LL LGT  G VLA+DV+ G+  W  +   PGG+  +S +  G  +
Sbjct: 60  CSFTGKKRKKGKGPCLLALGTEDGKVLAVDVSTGERKWPTSHPIPGGICGLSFAKKGQLL 119

Query: 130 YTAGADGMVCVIDFMSGNLLEKFKASTKAVSCMSVSSDGKTLATASAQLKIFNCSNHKKI 189
              G DG     +  +G LL++FK S K++S ++ S D K LA  S++L++ +    K++
Sbjct: 120 CVVGHDGKAYEFNSETGELLKEFKISKKSISSLAFSHDEKYLAIFSSRLRVISWETGKEV 179

Query: 190 QKLSGHPGPVRCMVFTEDDKYILSSAVGERYVAVWRVD-GAKKQSASCVLAMEHPAVFLD 248
            K     G +  +  + D KY+++S    +++ VWR D      S+   L + H  + LD
Sbjct: 180 LKCPNDMGNIHRVSISNDAKYLITSDSESKHLQVWRCDLSLGTVSSGPTLPLRHAPLVLD 239

Query: 249 SRCIDRGEDDEAGICVLAISEVGLCYLWFGNSIEELRDAKPTKISLSLEDI-----SSRN 303
             C   G  +E  + V A++  G  Y+W   +         TKI+L  E +     +S +
Sbjct: 240 --CHSGG--NENDLVVSAVTSSGGTYIWKNLNASSEDQIHRTKITLKTEKVESDKENSES 295

Query: 304 FKGALPAIYAAKLQGIQKPASGQVFLVHGSLVKPSFQKILLHS-GTDIKLNVSHDGVLLP 362
            K    +  A+K Q + +    Q  + +GS+  P F  + +   G ++ L V  +  L  
Sbjct: 296 SKKRCSSFIASKFQSMGEDGQMQALVTYGSVDHPQFTVLNISDLGENVVLTVGDE--LDS 353

Query: 363 TSQVLAKTKKGTGVQRVTALDRANAEDALLPIPKVFDSHXXXXXXXXXXXXXVIHDSLRS 422
             +  + +KK    +   +  R    D  LP                         +   
Sbjct: 354 IQKQDSLSKKAVEKESKKSKKRQATSDPDLPT------------------------TTDK 389

Query: 423 SKADFLEIEDDMVQDEIDVTCMEDRMRSLGMLKSESDCASNFELCSS----------LLK 472
              D  E+ D ++ D+ +   + +++ +L +L  E+   S+ E  SS          LLK
Sbjct: 390 VDLDQCEVVDGVLDDDPNEQTIGEKLTNLNLL-DENKSKSDKEQVSSKPPSADSVDVLLK 448

Query: 473 G----------IDLEATLPMKKIRAAVLSMVPSEVFKLLEVLLATWQSRSSSGKYVLPWI 522
                      +D   T   K I  +V  + PS V KLL  L++  +SR +     LPW+
Sbjct: 449 QALNADDRALLLDCLYTQDEKVIMNSVAQLNPSNVLKLLNSLISIIESRGAILACALPWL 508

Query: 523 YSILVNHGHNIIAQESGPRLLDSLHKITNSRGCALQPLLQLSGRLQLVTSQI 574
             +L+ H   I++QES  ++L+SL+++  SR    + + QLS  L ++ + +
Sbjct: 509 KCLLLQHASGIMSQESSLKVLNSLYQLIESRVSTFKSVFQLSSFLDILYTGV 560


>Medtr4g011300.2 | transducin family protein/WD-40 repeat protein,
           putative | HC | chr4:2703522-2695734 | 20130731
          Length = 620

 Score =  165 bits (418), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 153/592 (25%), Positives = 264/592 (44%), Gaps = 68/592 (11%)

Query: 10  ILTAFNPSLDLFAVTAGDGRIKIWDTLKGQLQNEFADITSTHAATIALKGHLSVDYTCIH 69
           +LTAF P+ D  A+ + +G  KIW+T  G L  E+      H           + Y+CI 
Sbjct: 10  VLTAFTPNGDYAAILSANGTAKIWNTNSGDLLAEWKPSDGDH----------DIRYSCIA 59

Query: 70  WFSFERKRKRKHTSSLLVLGTGSGDVLALDVAAGQLAWRIADCHPGGVRAISSSANGSSI 129
                +KRK+     LL LGT  G VLA+DV+ G+  W  +   PGG+  +S +  G  +
Sbjct: 60  CSFTGKKRKKGKGPCLLALGTEDGKVLAVDVSTGERKWPTSHPIPGGICGLSFAKKGQLL 119

Query: 130 YTAGADGMVCVIDFMSGNLLEKFKASTKAVSCMSVSSDGKTLATASAQLKIFNCSNHKKI 189
              G DG     +  +G LL++FK S K++S ++ S D K LA  S++L++ +    K++
Sbjct: 120 CVVGHDGKAYEFNSETGELLKEFKISKKSISSLAFSHDEKYLAIFSSRLRVISWETGKEV 179

Query: 190 QKLSGHPGPVRCMVFTEDDKYILSSAVGERYVAVWRVD-GAKKQSASCVLAMEHPAVFLD 248
            K     G +  +  + D KY+++S    +++ VWR D      S+   L + H  + LD
Sbjct: 180 LKCPNDMGNIHRVSISNDAKYLITSDSESKHLQVWRCDLSLGTVSSGPTLPLRHAPLVLD 239

Query: 249 SRCIDRGEDDEAGICVLAISEVGLCYLWFGNSIEELRDAKPTKISLSLEDI-----SSRN 303
             C   G  +E  + V A++  G  Y+W   +         TKI+L  E +     +S +
Sbjct: 240 --CHSGG--NENDLVVSAVTSSGGTYIWKNLNASSEDQIHRTKITLKTEKVESDKENSES 295

Query: 304 FKGALPAIYAAKLQGIQKPASGQVFLVHGSLVKPSFQKILLHS-GTDIKLNVSHDGVLLP 362
            K    +  A+K Q + +    Q  + +GS+  P F  + +   G ++ L V  +  L  
Sbjct: 296 SKKRCSSFIASKFQSMGEDGQMQALVTYGSVDHPQFTVLNISDLGENVVLTVGDE--LDS 353

Query: 363 TSQVLAKTKKGTGVQRVTALDRANAEDALLPIPKVFDSHXXXXXXXXXXXXXVIHDSLRS 422
             +  + +KK    +   +  R    D  LP                         +   
Sbjct: 354 IQKQDSLSKKAVEKESKKSKKRQATSDPDLPT------------------------TTDK 389

Query: 423 SKADFLEIEDDMVQDEIDVTCMEDRMRSLGMLKSESDCASNFELCSS----------LLK 472
              D  E+ D ++ D+ +   + +++ +L +L  E+   S+ E  SS          LLK
Sbjct: 390 VDLDQCEVVDGVLDDDPNEQTIGEKLTNLNLL-DENKSKSDKEQVSSKPPSADSVDVLLK 448

Query: 473 G----------IDLEATLPMKKIRAAVLSMVPSEVFKLLEVLLATWQSRSSSGKYVLPWI 522
                      +D   T   K I  +V  + PS V KLL  L++  +SR +     LPW+
Sbjct: 449 QALNADDRALLLDCLYTQDEKVIMNSVAQLNPSNVLKLLNSLISIIESRGAILACALPWL 508

Query: 523 YSILVNHGHNIIAQESGPRLLDSLHKITNSRGCALQPLLQLSGRLQLVTSQI 574
             +L+ H   I++QES  ++L+SL+++  SR    + + QLS  L ++ + +
Sbjct: 509 KCLLLQHASGIMSQESSLKVLNSLYQLIESRVSTFKSVFQLSSFLDILYTGV 560


>Medtr3g052220.1 | transducin/WD-like repeat-protein | HC |
           chr3:20670443-20658166 | 20130731
          Length = 513

 Score = 55.5 bits (132), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/191 (22%), Positives = 82/191 (42%), Gaps = 22/191 (11%)

Query: 14  FNPSLDLFAVTAGDGRIKIWDTLKGQLQNEFADITSTHAATIALKGH--LSVDYTCIHWF 71
           F+P        + DG I++WD + G+L+    D+      T  +     L VD++     
Sbjct: 222 FSPDGQYLVSCSIDGFIEVWDYISGKLKK---DLQYQAEETFMMHDEPVLCVDFS----- 273

Query: 72  SFERKRKRKHTSSLLVLGTGSGDVLALDVAAGQLAWRIADCHPGGVRAISSSANGSSIYT 131
                      S ++  G+  G +    +   Q   R+   H  GV ++S S +GS + +
Sbjct: 274 ---------RDSEMIASGSTDGKIKVWRIRTAQCLRRLEHAHSQGVTSVSFSRDGSQLLS 324

Query: 132 AGADGMVCVIDFMSGNLLEKFKASTKAVSCMSVSSDGKTLATASAQ--LKIFNCSNHKKI 189
              D    +    SG +L++F+  T  V+  + ++DG  + TAS+   +K+++      +
Sbjct: 325 TSFDSTARIHGLKSGKMLKEFRGHTSYVNDATFTNDGTRVITASSDCTVKVWDLKTTDCL 384

Query: 190 QKLSGHPGPVR 200
           Q     P P+R
Sbjct: 385 QTFKP-PPPLR 394