Miyakogusa Predicted Gene

Lj4g3v2289090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2289090.1 Non Characterized Hit- tr|B9RTB6|B9RTB6_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,45.04,4e-19,seg,NULL,NODE_83916_length_915_cov_11.073224.path1.1
         (146 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g120750.1 | heavy-metal-associated domain protein | HC | c...   133   6e-32
Medtr4g120750.2 | heavy-metal-associated domain protein | HC | c...   133   6e-32

>Medtr4g120750.1 | heavy-metal-associated domain protein | HC |
           chr4:49997865-49996592 | 20130731
          Length = 245

 Score =  133 bits (334), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 73/122 (59%), Positives = 84/122 (68%), Gaps = 6/122 (4%)

Query: 30  QQWQNNPGTEDIRQAHMMLHHHHPNYINSSG--HNYVDLRDR-YHNSQVFLHEQS--QSM 84
           Q WQNN GTE++ +AHM  HHH PNY+N  G  +NYVD RDR YHN  VFL E S  Q +
Sbjct: 125 QHWQNNIGTENVEKAHMS-HHHQPNYVNRIGSRNNYVDHRDRLYHNDPVFLQEPSKIQPL 183

Query: 85  HVTHSYNTHMXXXXXXXXXXXXXXXWHTHYNHMEHYNGDYQNGNVNITSMFSDDNPNACS 144
           +V HSYNTHM               WHTHYNH+EHYNGDY N NV+I +MFSDDNPNAC+
Sbjct: 184 NVIHSYNTHMPSSHITEYECVRSPSWHTHYNHIEHYNGDYNNNNVDIAAMFSDDNPNACT 243

Query: 145 IV 146
           IV
Sbjct: 244 IV 245


>Medtr4g120750.2 | heavy-metal-associated domain protein | HC |
           chr4:49997997-49996592 | 20130731
          Length = 245

 Score =  133 bits (334), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 73/122 (59%), Positives = 84/122 (68%), Gaps = 6/122 (4%)

Query: 30  QQWQNNPGTEDIRQAHMMLHHHHPNYINSSG--HNYVDLRDR-YHNSQVFLHEQS--QSM 84
           Q WQNN GTE++ +AHM  HHH PNY+N  G  +NYVD RDR YHN  VFL E S  Q +
Sbjct: 125 QHWQNNIGTENVEKAHMS-HHHQPNYVNRIGSRNNYVDHRDRLYHNDPVFLQEPSKIQPL 183

Query: 85  HVTHSYNTHMXXXXXXXXXXXXXXXWHTHYNHMEHYNGDYQNGNVNITSMFSDDNPNACS 144
           +V HSYNTHM               WHTHYNH+EHYNGDY N NV+I +MFSDDNPNAC+
Sbjct: 184 NVIHSYNTHMPSSHITEYECVRSPSWHTHYNHIEHYNGDYNNNNVDIAAMFSDDNPNACT 243

Query: 145 IV 146
           IV
Sbjct: 244 IV 245