Miyakogusa Predicted Gene

Lj4g3v2282930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2282930.1 Non Characterized Hit- tr|I1KMT7|I1KMT7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37624
PE,90.42,0,JAB1/MPN domain,NULL; JAB,JAB1/Mov34/MPN/PAD-1; SUBFAMILY
NOT NAMED,NULL; AMSH,NULL; JAB/MPN domain,,CUFF.50687.1
         (261 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g121470.1 | AMSH-like ubiquitin thioesterase-like protein ...   488   e-138
Medtr4g121470.2 | AMSH-like ubiquitin thioesterase-like protein ...   291   6e-79
Medtr6g083940.1 | AMSH-like ubiquitin thioesterase | HC | chr6:3...   289   2e-78
Medtr8g104310.1 | AMSH-like ubiquitin thioesterase | HC | chr8:4...   271   5e-73
Medtr8g104310.2 | AMSH-like ubiquitin thioesterase | HC | chr8:4...   268   3e-72
Medtr5g034240.1 | AMSH-like ubiquitin thioesterase | HC | chr5:1...   252   3e-67
Medtr4g121470.3 | AMSH-like ubiquitin thioesterase-like protein ...   239   2e-63

>Medtr4g121470.1 | AMSH-like ubiquitin thioesterase-like protein |
           HC | chr4:50216958-50208834 | 20130731
          Length = 509

 Score =  488 bits (1256), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 231/261 (88%), Positives = 246/261 (94%)

Query: 1   MDSVLSLDDGRWMRPTVESYAPLVTESREDPLQLLNIKQPLPPPVLAQVYPERAPIPPSK 60
           MDS+LSLDDGRW+ PT ES +P+VTE RED LQ LNIKQPLPPPVLAQV+PERA IP SK
Sbjct: 249 MDSILSLDDGRWLHPTAESCSPVVTEPREDFLQSLNIKQPLPPPVLAQVHPERACIPHSK 308

Query: 61  VADPRPGPAKSSHDSEHGPTTYQHLHVPVKMMEEFLRLALENTQKNLETCGVLAGSLKNR 120
           VADPRPGPAKSSHDS HGPTT+QHLH+PVKMME+FLRLA  NT+KNLETCGVLAGSLKNR
Sbjct: 309 VADPRPGPAKSSHDSGHGPTTFQHLHIPVKMMEDFLRLASVNTRKNLETCGVLAGSLKNR 368

Query: 121 VFHITTLIIPKQESTSDSCQTLNEEEIFEVQDGLSLFSLGWIHTHPSQTCFMSSVDLHTH 180
           VF ITTLIIPKQESTSDSCQTLNEEEIFEVQD LSLFSLGWIHTHPSQTCFMSSVDLHTH
Sbjct: 369 VFQITTLIIPKQESTSDSCQTLNEEEIFEVQDSLSLFSLGWIHTHPSQTCFMSSVDLHTH 428

Query: 181 YSYQIMLPEAIAIVMAPTDTASPHGIFHLSDPGGVSIIRNCQQSGFHPHEEPSDGSPIYE 240
           YSYQIMLPEAIAIVMAPTDT SPHGIFHLSDPGGVS+IRNCQ+ GFHPHEEPSDGSPIYE
Sbjct: 429 YSYQIMLPEAIAIVMAPTDTESPHGIFHLSDPGGVSVIRNCQERGFHPHEEPSDGSPIYE 488

Query: 241 HCSHVYINANLKFDVVDLRKR 261
           HCSHVY+NAN+KFDV+DLR+R
Sbjct: 489 HCSHVYMNANMKFDVLDLRER 509


>Medtr4g121470.2 | AMSH-like ubiquitin thioesterase-like protein |
           HC | chr4:50216958-50211331 | 20130731
          Length = 427

 Score =  291 bits (744), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 141/163 (86%), Positives = 150/163 (92%)

Query: 1   MDSVLSLDDGRWMRPTVESYAPLVTESREDPLQLLNIKQPLPPPVLAQVYPERAPIPPSK 60
           MDS+LSLDDGRW+ PT ES +P+VTE RED LQ LNIKQPLPPPVLAQV+PERA IP SK
Sbjct: 249 MDSILSLDDGRWLHPTAESCSPVVTEPREDFLQSLNIKQPLPPPVLAQVHPERACIPHSK 308

Query: 61  VADPRPGPAKSSHDSEHGPTTYQHLHVPVKMMEEFLRLALENTQKNLETCGVLAGSLKNR 120
           VADPRPGPAKSSHDS HGPTT+QHLH+PVKMME+FLRLA  NT+KNLETCGVLAGSLKNR
Sbjct: 309 VADPRPGPAKSSHDSGHGPTTFQHLHIPVKMMEDFLRLASVNTRKNLETCGVLAGSLKNR 368

Query: 121 VFHITTLIIPKQESTSDSCQTLNEEEIFEVQDGLSLFSLGWIH 163
           VF ITTLIIPKQESTSDSCQTLNEEEIFEVQD LSLFSLGWIH
Sbjct: 369 VFQITTLIIPKQESTSDSCQTLNEEEIFEVQDSLSLFSLGWIH 411


>Medtr6g083940.1 | AMSH-like ubiquitin thioesterase | HC |
           chr6:31340337-31333153 | 20130731
          Length = 513

 Score =  289 bits (739), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 143/242 (59%), Positives = 176/242 (72%), Gaps = 1/242 (0%)

Query: 18  ESYAPLVTESREDPLQLLNIKQPLPPPVLAQVYPERAPIPPSKVADPRPGPAKSSHDSEH 77
           ES + +  E  +   Q+  I+QP PPPVLA+V+ +  P     V +        S DS  
Sbjct: 273 ESPSLISFEETDTSAQVELIRQPSPPPVLAEVH-DLVPAVSPHVNEAGCKTEIPSSDSCV 331

Query: 78  GPTTYQHLHVPVKMMEEFLRLALENTQKNLETCGVLAGSLKNRVFHITTLIIPKQESTSD 137
              +   LH+   +ME F++LA  NT+KNLETCGVLAG LKNR F+IT LIIPKQESTSD
Sbjct: 332 RAESPLQLHISTALMENFMKLAKSNTKKNLETCGVLAGLLKNRKFYITALIIPKQESTSD 391

Query: 138 SCQTLNEEEIFEVQDGLSLFSLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAP 197
           SCQT +EEEIFEVQD  SLF LGWIHTHP+Q+CFMSS+DLHTHYSYQIMLPE++AIVMAP
Sbjct: 392 SCQTTHEEEIFEVQDKRSLFPLGWIHTHPTQSCFMSSIDLHTHYSYQIMLPESVAIVMAP 451

Query: 198 TDTASPHGIFHLSDPGGVSIIRNCQQSGFHPHEEPSDGSPIYEHCSHVYINANLKFDVVD 257
           TD +  HGIF L+ PGG+S+I+ C Q GFHPH +P DG PIY  C+ VY+N +LKF+V+D
Sbjct: 452 TDRSRNHGIFRLTTPGGMSVIKQCDQRGFHPHNQPPDGGPIYNTCTDVYMNPDLKFEVID 511

Query: 258 LR 259
           LR
Sbjct: 512 LR 513


>Medtr8g104310.1 | AMSH-like ubiquitin thioesterase | HC |
           chr8:43936023-43927548 | 20130731
          Length = 511

 Score =  271 bits (692), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 141/236 (59%), Positives = 168/236 (71%), Gaps = 5/236 (2%)

Query: 26  ESREDPLQLLNIKQPLPPPVLAQVYPERAPIPP--SKVADPRPGPAKSSHDSEHGPTTYQ 83
           E  ED   +  I+QP PPPVLA+V      + P   +       P   S      P    
Sbjct: 279 EETEDFAPIKVIRQPSPPPVLAEVQDLVPTVSPHVDEAGCKTETPLSDSFGRAESPL--- 335

Query: 84  HLHVPVKMMEEFLRLALENTQKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLN 143
            LH+   MM  F++LA  NT KNLETCG+LAGSLKNR F+IT LIIPKQE+TS SCQ  N
Sbjct: 336 QLHISTAMMGSFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQEATSSSCQATN 395

Query: 144 EEEIFEVQDGLSLFSLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTASP 203
           EEEIFE QD  SLF LGWIHTHP+Q+CFMSS+D+HTHYSYQIMLPEA+AIVMAPTD++  
Sbjct: 396 EEEIFEAQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPEAVAIVMAPTDSSRT 455

Query: 204 HGIFHLSDPGGVSIIRNCQQSGFHPHEEPSDGSPIYEHCSHVYINANLKFDVVDLR 259
           HGIF L+ PGG+S+IR CQQ GFHPH+ P DG PIY+ C+ VY+N +LKFDV+DLR
Sbjct: 456 HGIFRLTTPGGMSVIRQCQQRGFHPHDPPPDGGPIYDTCTDVYLNPDLKFDVIDLR 511


>Medtr8g104310.2 | AMSH-like ubiquitin thioesterase | HC |
           chr8:43935969-43927719 | 20130731
          Length = 373

 Score =  268 bits (686), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 141/236 (59%), Positives = 168/236 (71%), Gaps = 5/236 (2%)

Query: 26  ESREDPLQLLNIKQPLPPPVLAQVYPERAPIPP--SKVADPRPGPAKSSHDSEHGPTTYQ 83
           E  ED   +  I+QP PPPVLA+V      + P   +       P   S      P    
Sbjct: 141 EETEDFAPIKVIRQPSPPPVLAEVQDLVPTVSPHVDEAGCKTETPLSDSFGRAESPL--- 197

Query: 84  HLHVPVKMMEEFLRLALENTQKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLN 143
            LH+   MM  F++LA  NT KNLETCG+LAGSLKNR F+IT LIIPKQE+TS SCQ  N
Sbjct: 198 QLHISTAMMGSFMKLAKSNTDKNLETCGILAGSLKNRKFYITALIIPKQEATSSSCQATN 257

Query: 144 EEEIFEVQDGLSLFSLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTASP 203
           EEEIFE QD  SLF LGWIHTHP+Q+CFMSS+D+HTHYSYQIMLPEA+AIVMAPTD++  
Sbjct: 258 EEEIFEAQDKRSLFPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPEAVAIVMAPTDSSRT 317

Query: 204 HGIFHLSDPGGVSIIRNCQQSGFHPHEEPSDGSPIYEHCSHVYINANLKFDVVDLR 259
           HGIF L+ PGG+S+IR CQQ GFHPH+ P DG PIY+ C+ VY+N +LKFDV+DLR
Sbjct: 318 HGIFRLTTPGGMSVIRQCQQRGFHPHDPPPDGGPIYDTCTDVYLNPDLKFDVIDLR 373


>Medtr5g034240.1 | AMSH-like ubiquitin thioesterase | HC |
           chr5:14819002-14814603 | 20130731
          Length = 235

 Score =  252 bits (643), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 115/224 (51%), Positives = 161/224 (71%), Gaps = 1/224 (0%)

Query: 37  IKQPLPPPVLAQVYPERAPIPPSKVADPRPGPAKSSHDSEHGPT-TYQHLHVPVKMMEEF 95
           + +  P P L  V P       S +     G   ++ D+E   + T + +H+ +++ME+F
Sbjct: 12  VTKSSPSPALCCVEPVTQDEQNSHITAFHSGDRSTNSDNESSSSKTVRDVHISMRLMEDF 71

Query: 96  LRLALENTQKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDGLS 155
           L LA ENT+K+LETCG+L   L+    ++TTLIIPKQES S+SC   NEEE+F + +  S
Sbjct: 72  LDLAKENTEKDLETCGILGAFLEKGTLYMTTLIIPKQESASNSCNATNEEEVFTILNERS 131

Query: 156 LFSLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTASPHGIFHLSDPGGV 215
           L+ +GWIHTHPSQ+CFMSSVDLHT YSYQ M+PEA AIV+APTDT+   G+F L++P G+
Sbjct: 132 LYPVGWIHTHPSQSCFMSSVDLHTQYSYQAMIPEAFAIVLAPTDTSRSCGLFRLTEPDGM 191

Query: 216 SIIRNCQQSGFHPHEEPSDGSPIYEHCSHVYINANLKFDVVDLR 259
           +I+RNC + GFHPH+EP +G+P+YEHCS+VY N+NL+F++ DLR
Sbjct: 192 NILRNCPERGFHPHKEPDNGNPVYEHCSNVYRNSNLRFEIFDLR 235


>Medtr4g121470.3 | AMSH-like ubiquitin thioesterase-like protein |
           HC | chr4:50216958-50213068 | 20130731
          Length = 391

 Score =  239 bits (609), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 117/138 (84%), Positives = 126/138 (91%)

Query: 1   MDSVLSLDDGRWMRPTVESYAPLVTESREDPLQLLNIKQPLPPPVLAQVYPERAPIPPSK 60
           MDS+LSLDDGRW+ PT ES +P+VTE RED LQ LNIKQPLPPPVLAQV+PERA IP SK
Sbjct: 249 MDSILSLDDGRWLHPTAESCSPVVTEPREDFLQSLNIKQPLPPPVLAQVHPERACIPHSK 308

Query: 61  VADPRPGPAKSSHDSEHGPTTYQHLHVPVKMMEEFLRLALENTQKNLETCGVLAGSLKNR 120
           VADPRPGPAKSSHDS HGPTT+QHLH+PVKMME+FLRLA  NT+KNLETCGVLAGSLKNR
Sbjct: 309 VADPRPGPAKSSHDSGHGPTTFQHLHIPVKMMEDFLRLASVNTRKNLETCGVLAGSLKNR 368

Query: 121 VFHITTLIIPKQESTSDS 138
           VF ITTLIIPKQESTSDS
Sbjct: 369 VFQITTLIIPKQESTSDS 386