Miyakogusa Predicted Gene
- Lj4g3v2267630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2267630.1 Non Characterized Hit- tr|C6T222|C6T222_SOYBN
Putative uncharacterized protein OS=Glycine max PE=4
S,67.65,0.0006,seg,NULL,CUFF.50666.1
(86 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g121930.1 | hypothetical protein | HC | chr4:50343181-5034... 100 3e-22
>Medtr4g121930.1 | hypothetical protein | HC |
chr4:50343181-50340762 | 20130731
Length = 170
Score = 100 bits (249), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 60/87 (68%), Gaps = 9/87 (10%)
Query: 1 MADLQQKLDALKGLVGVLNSMDDA-GETQNAXXXXXXXXXXXXXXGRNRF-SGKYNNMAT 58
MADLQQKLDALKGLVGVLNSMDD ETQN GRNR KYNN
Sbjct: 1 MADLQQKLDALKGLVGVLNSMDDGESETQNGSPSTPLP-------GRNRSNKAKYNNTGK 53
Query: 59 QTIKGLSNQTGFTEGNANGAINFGNLH 85
Q IKGLSNQTGFTEGNANGAINFG+L
Sbjct: 54 QNIKGLSNQTGFTEGNANGAINFGDLR 80
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 53 YNNMATQTIKGLSNQTGFTEGNANGAINFGNLHA 86
Y+N Q IKGL+NQTG+ +GNANG INFG L +
Sbjct: 132 YSNAGKQNIKGLTNQTGYVKGNANGVINFGTLTS 165