Miyakogusa Predicted Gene

Lj4g3v2267350.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2267350.1 CUFF.50646.1
         (165 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g122070.1 | Fip1 motif protein | HC | chr4:50411541-504042...   192   1e-49

>Medtr4g122070.1 | Fip1 motif protein | HC | chr4:50411541-50404201 |
            20130731
          Length = 1110

 Score =  192 bits (488), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 106/174 (60%), Positives = 128/174 (73%), Gaps = 13/174 (7%)

Query: 1    MDQGFTKKRTALLAFDDSHNNKTIKFDISKSVCENENQKWLENLPNKGQKESLDIEEGEI 60
            +D+G  +KR AL+ FDDS   K IK D+SKS C ++N+K L+NL +KGQKE LD+EEGEI
Sbjct: 938  VDRGIAEKRKALVGFDDSRK-KAIKLDVSKSQCVDQNKKLLQNLSDKGQKEGLDVEEGEI 996

Query: 61   VTEEPHMEPSVSRRDGSEGAALTDNTVKKRKSQNGYNSELHTGNIASQKILDTLAKMEKR 120
            VTEEP +E SVSRRD SEGA L +N VKK+ SQNG NSE    N+ SQKILDTLAKMEKR
Sbjct: 997  VTEEPSVEVSVSRRDVSEGATLAEN-VKKKISQNGNNSEPQIDNLDSQKILDTLAKMEKR 1055

Query: 121  GERFKQPMNMIKEA-----------EKTLKLNADTAVNMSEIKQHRPARKRRWN 163
             ERFKQP+ M KEA            K+LKLN ++AV++ E+KQ RP RKRRWN
Sbjct: 1056 RERFKQPIGMNKEAVKQPISLNNEVVKSLKLNTNSAVDIGEMKQQRPVRKRRWN 1109