Miyakogusa Predicted Gene

Lj4g3v2265060.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2265060.1 Non Characterized Hit- tr|A5ADU7|A5ADU7_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,41.88,6e-18,PAS
domain,PAS domain; PAS,PAS domain; sensory_box: PAS domain S-box
protein,PAS domain; seg,NULL;
P,NODE_55088_length_1043_cov_63.962608.path1.1
         (317 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g034020.1 | PAS domain tyrosine kinase family protein | HC...   423   e-119
Medtr4g122160.3 | PAS domain tyrosine kinase family protein | HC...   340   1e-93
Medtr4g122160.2 | PAS domain tyrosine kinase family protein | HC...   340   1e-93
Medtr4g122160.1 | PAS domain tyrosine kinase family protein | HC...   340   1e-93
Medtr5g010730.2 | PAS domain tyrosine kinase family protein | HC...   104   1e-22
Medtr5g010730.1 | PAS domain tyrosine kinase family protein | HC...   103   2e-22

>Medtr2g034020.1 | PAS domain tyrosine kinase family protein | HC |
           chr2:12981641-12974612 | 20130731
          Length = 744

 Score =  423 bits (1088), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/328 (68%), Positives = 250/328 (76%), Gaps = 13/328 (3%)

Query: 1   MGTPEAEEELVKKIERLEAGHVHLKQEMSKLKLSQRRRSHSVSPQRSRLAGGGGAAN--- 57
           M +PE E EL+KKIERLEAG VHLKQEMSKLKLSQRRRSHSVSPQRSRL     +A+   
Sbjct: 1   MESPEPEAELLKKIERLEAGQVHLKQEMSKLKLSQRRRSHSVSPQRSRLGASASSASSAA 60

Query: 58  ----KAPSSPLQRESRXXXXXXXXXXKYLNILQSMGHSVHILDLQCRIVYWNPSAENLYG 113
               K  SSPLQRESR          KYLNILQS+GHSVHILDLQCRI+YWNPSAENLYG
Sbjct: 61  SASSKGCSSPLQRESRSSHDPQNGGGKYLNILQSIGHSVHILDLQCRIIYWNPSAENLYG 120

Query: 114 YAAAEVLGHDGIEVVVDPREIALANDIFNRVKMGESWTGKFPVKNKMGESFIAVATNTPF 173
           Y A EVLG DGIEV+VDP E  +ANDIFNRVKMGESWTG+FPVKNK+G+ F+ VAT+TPF
Sbjct: 121 YTAEEVLGLDGIEVLVDPSEFDIANDIFNRVKMGESWTGQFPVKNKIGDRFVVVATDTPF 180

Query: 174 YDDHGSLVGVICVSSDSRPFLETRVPLSGGKNAAPDLGSNFPRSGSTSKLVLDSQQPLQV 233
           YDD GSLVGVICV+SDSRPFLE  VP S  KN   D G NFPR   T+KL LD +QPLQ 
Sbjct: 181 YDDDGSLVGVICVTSDSRPFLENIVPFSARKNEEKDSGVNFPRIAITNKLGLDPEQPLQN 240

Query: 234 SLASKISNLASKVSNKVKSRMRTRDNNVDXXXXXXXXXQYSEHNVP----SDQRED-VNS 288
           +LASKISNLA+KVSNKVKS++RTR+NNV+          +SEH       SDQRED  NS
Sbjct: 241 ALASKISNLATKVSNKVKSKIRTRENNVN-GEGGSSESHHSEHGFSDYGHSDQREDGGNS 299

Query: 289 SGASTPREGVPQSPFGVFSQVEEKSQGK 316
           SGASTP   VP +PFG FS+ EE+SQGK
Sbjct: 300 SGASTPAGEVPPTPFGSFSRAEERSQGK 327


>Medtr4g122160.3 | PAS domain tyrosine kinase family protein | HC |
           chr4:50446440-50439418 | 20130731
          Length = 653

 Score =  340 bits (872), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 189/327 (57%), Positives = 225/327 (68%), Gaps = 16/327 (4%)

Query: 1   MGTPEAEEELVKKIERLEAGHVHLKQEMSKLKLS---------QRRRSHSVSPQRSRLAG 51
           M + E E+ + KKI+ LE GH ++KQEMSKLKLS          R+RSHSVSPQRSRL  
Sbjct: 2   MRSEEREKAVQKKIQELEEGHAYMKQEMSKLKLSDGREQQQHHHRQRSHSVSPQRSRLGS 61

Query: 52  GG-GAANKAPSSPLQRESRXXXXXXXXXXKYLNILQSMGHSVHILDLQCRIVYWNPSAEN 110
              G+ +   SSPL++E+            YLNIL S+GHS+HILDL  RI+YWN SAEN
Sbjct: 62  WNKGSCSFKHSSPLRKETHAHALVNFTEKHYLNILHSLGHSLHILDLNSRIIYWNRSAEN 121

Query: 111 LYGYAAAEVLGHDGIEVVVDPREIALANDIFNRVKMGESWTGKFPVKNKMGESFIAVATN 170
           LYGYAA EVLG DGI+++VD R+  LA D  N V  GE W+G+F VKNK GE F+AV TN
Sbjct: 122 LYGYAADEVLGQDGIDLLVDSRDWELACDTVNCVMKGEKWSGQFLVKNKKGEKFLAVTTN 181

Query: 171 TPFYDDHGSLVGVICVSSDSRPFLETRVPLSGGKNAAPDLGSNFPRSGSTS-KLVLDSQQ 229
           TPFYDD GSLVG+ICVSSDSRPFLE R P  G KNA  D G    RS S S KL  DSQQ
Sbjct: 182 TPFYDD-GSLVGIICVSSDSRPFLEMRAPFFGVKNAESDYG--IRRSSSVSNKLGFDSQQ 238

Query: 230 PLQVSLASKISNLASKVSNKVKSRMRTRDNNVDXXXXXXXXXQYSEHNVPSDQREDVNSS 289
           PLQ +LASKISNLASK+ NKVKS++ T +NN+D         Q+S+    S+ RED NSS
Sbjct: 239 PLQTALASKISNLASKMGNKVKSKIWTGENNMD-RDGGNGESQHSDLGF-SEHREDANSS 296

Query: 290 GASTPREGVPQSPFGVFSQVEEKSQGK 316
           GASTP+  +PQSP GVF +VEEK + K
Sbjct: 297 GASTPKGDLPQSPVGVFYRVEEKFEAK 323


>Medtr4g122160.2 | PAS domain tyrosine kinase family protein | HC |
           chr4:50446384-50439484 | 20130731
          Length = 653

 Score =  340 bits (872), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 189/327 (57%), Positives = 225/327 (68%), Gaps = 16/327 (4%)

Query: 1   MGTPEAEEELVKKIERLEAGHVHLKQEMSKLKLS---------QRRRSHSVSPQRSRLAG 51
           M + E E+ + KKI+ LE GH ++KQEMSKLKLS          R+RSHSVSPQRSRL  
Sbjct: 2   MRSEEREKAVQKKIQELEEGHAYMKQEMSKLKLSDGREQQQHHHRQRSHSVSPQRSRLGS 61

Query: 52  GG-GAANKAPSSPLQRESRXXXXXXXXXXKYLNILQSMGHSVHILDLQCRIVYWNPSAEN 110
              G+ +   SSPL++E+            YLNIL S+GHS+HILDL  RI+YWN SAEN
Sbjct: 62  WNKGSCSFKHSSPLRKETHAHALVNFTEKHYLNILHSLGHSLHILDLNSRIIYWNRSAEN 121

Query: 111 LYGYAAAEVLGHDGIEVVVDPREIALANDIFNRVKMGESWTGKFPVKNKMGESFIAVATN 170
           LYGYAA EVLG DGI+++VD R+  LA D  N V  GE W+G+F VKNK GE F+AV TN
Sbjct: 122 LYGYAADEVLGQDGIDLLVDSRDWELACDTVNCVMKGEKWSGQFLVKNKKGEKFLAVTTN 181

Query: 171 TPFYDDHGSLVGVICVSSDSRPFLETRVPLSGGKNAAPDLGSNFPRSGSTS-KLVLDSQQ 229
           TPFYDD GSLVG+ICVSSDSRPFLE R P  G KNA  D G    RS S S KL  DSQQ
Sbjct: 182 TPFYDD-GSLVGIICVSSDSRPFLEMRAPFFGVKNAESDYG--IRRSSSVSNKLGFDSQQ 238

Query: 230 PLQVSLASKISNLASKVSNKVKSRMRTRDNNVDXXXXXXXXXQYSEHNVPSDQREDVNSS 289
           PLQ +LASKISNLASK+ NKVKS++ T +NN+D         Q+S+    S+ RED NSS
Sbjct: 239 PLQTALASKISNLASKMGNKVKSKIWTGENNMD-RDGGNGESQHSDLGF-SEHREDANSS 296

Query: 290 GASTPREGVPQSPFGVFSQVEEKSQGK 316
           GASTP+  +PQSP GVF +VEEK + K
Sbjct: 297 GASTPKGDLPQSPVGVFYRVEEKFEAK 323


>Medtr4g122160.1 | PAS domain tyrosine kinase family protein | HC |
           chr4:50446440-50439418 | 20130731
          Length = 739

 Score =  340 bits (871), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 189/327 (57%), Positives = 225/327 (68%), Gaps = 16/327 (4%)

Query: 1   MGTPEAEEELVKKIERLEAGHVHLKQEMSKLKLS---------QRRRSHSVSPQRSRLAG 51
           M + E E+ + KKI+ LE GH ++KQEMSKLKLS          R+RSHSVSPQRSRL  
Sbjct: 2   MRSEEREKAVQKKIQELEEGHAYMKQEMSKLKLSDGREQQQHHHRQRSHSVSPQRSRLGS 61

Query: 52  GG-GAANKAPSSPLQRESRXXXXXXXXXXKYLNILQSMGHSVHILDLQCRIVYWNPSAEN 110
              G+ +   SSPL++E+            YLNIL S+GHS+HILDL  RI+YWN SAEN
Sbjct: 62  WNKGSCSFKHSSPLRKETHAHALVNFTEKHYLNILHSLGHSLHILDLNSRIIYWNRSAEN 121

Query: 111 LYGYAAAEVLGHDGIEVVVDPREIALANDIFNRVKMGESWTGKFPVKNKMGESFIAVATN 170
           LYGYAA EVLG DGI+++VD R+  LA D  N V  GE W+G+F VKNK GE F+AV TN
Sbjct: 122 LYGYAADEVLGQDGIDLLVDSRDWELACDTVNCVMKGEKWSGQFLVKNKKGEKFLAVTTN 181

Query: 171 TPFYDDHGSLVGVICVSSDSRPFLETRVPLSGGKNAAPDLGSNFPRSGSTS-KLVLDSQQ 229
           TPFYDD GSLVG+ICVSSDSRPFLE R P  G KNA  D G    RS S S KL  DSQQ
Sbjct: 182 TPFYDD-GSLVGIICVSSDSRPFLEMRAPFFGVKNAESDYG--IRRSSSVSNKLGFDSQQ 238

Query: 230 PLQVSLASKISNLASKVSNKVKSRMRTRDNNVDXXXXXXXXXQYSEHNVPSDQREDVNSS 289
           PLQ +LASKISNLASK+ NKVKS++ T +NN+D         Q+S+    S+ RED NSS
Sbjct: 239 PLQTALASKISNLASKMGNKVKSKIWTGENNMD-RDGGNGESQHSDLGF-SEHREDANSS 296

Query: 290 GASTPREGVPQSPFGVFSQVEEKSQGK 316
           GASTP+  +PQSP GVF +VEEK + K
Sbjct: 297 GASTPKGDLPQSPVGVFYRVEEKFEAK 323


>Medtr5g010730.2 | PAS domain tyrosine kinase family protein | HC |
           chr5:2934459-2927353 | 20130731
          Length = 693

 Score =  104 bits (259), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 96/171 (56%), Gaps = 19/171 (11%)

Query: 81  YLNILQSMGHSVHILDLQC-RIVYWNPSAENLYGYAAAEVLGHDGIEVVVDPREIALAND 139
           Y N+L+ MGH+V++ D+   +I+YWN SAE LYG+ A E++G    + +V          
Sbjct: 70  YANVLKCMGHAVYVHDVTTGQIIYWNNSAETLYGWKANEIIGQRLADYLVSEEYYGSLRR 129

Query: 140 IFNRVKMGESWTGKFPVKNKMGESFIAVATNTPFYDDHGSLVGVICVSSD-----SRPFL 194
           I +++  G  W+G+FP+K + GE F+A+ T TP Y+D G LVGVI +SSD     S+ F 
Sbjct: 130 ILHQLITGVPWSGQFPLKKRSGEIFMAMVTKTPLYED-GKLVGVISISSDAVLVNSKDFD 188

Query: 195 ETRVPLSGGKNAAPDLGSNFPRSGSTSKLVLDSQQPLQVSLASKISNLASK 245
           + R   S   N  P + S        SK +     P +  +AS +SNLASK
Sbjct: 189 KQRTCQS-RTNDQPGIQS--------SKRI---HWPPRPQMASSVSNLASK 227


>Medtr5g010730.1 | PAS domain tyrosine kinase family protein | HC |
           chr5:2934459-2927353 | 20130731
          Length = 748

 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/171 (38%), Positives = 96/171 (56%), Gaps = 19/171 (11%)

Query: 81  YLNILQSMGHSVHILDLQC-RIVYWNPSAENLYGYAAAEVLGHDGIEVVVDPREIALAND 139
           Y N+L+ MGH+V++ D+   +I+YWN SAE LYG+ A E++G    + +V          
Sbjct: 70  YANVLKCMGHAVYVHDVTTGQIIYWNNSAETLYGWKANEIIGQRLADYLVSEEYYGSLRR 129

Query: 140 IFNRVKMGESWTGKFPVKNKMGESFIAVATNTPFYDDHGSLVGVICVSSD-----SRPFL 194
           I +++  G  W+G+FP+K + GE F+A+ T TP Y+D G LVGVI +SSD     S+ F 
Sbjct: 130 ILHQLITGVPWSGQFPLKKRSGEIFMAMVTKTPLYED-GKLVGVISISSDAVLVNSKDFD 188

Query: 195 ETRVPLSGGKNAAPDLGSNFPRSGSTSKLVLDSQQPLQVSLASKISNLASK 245
           + R   S   N  P + S        SK +     P +  +AS +SNLASK
Sbjct: 189 KQRTCQS-RTNDQPGIQS--------SKRI---HWPPRPQMASSVSNLASK 227