Miyakogusa Predicted Gene

Lj4g3v2252440.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2252440.2 Non Characterized Hit- tr|H9GCT9|H9GCT9_ANOCA
Uncharacterized protein (Fragment) OS=Anolis
carolinen,32.59,3e-17,seg,NULL; BUCENTAUR RELATED,NULL;
BCNT,Craniofacial development protein 1/Bucentaur;
coiled-coil,NUL,CUFF.50586.2
         (255 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g123060.2 | craniofacial development protein | HC | chr4:5...   315   3e-86
Medtr4g123060.1 | craniofacial development protein | HC | chr4:5...   275   3e-74
Medtr4g123060.3 | craniofacial development protein | HC | chr4:5...   256   2e-68

>Medtr4g123060.2 | craniofacial development protein | HC |
           chr4:50793388-50795716 | 20130731
          Length = 253

 Score =  315 bits (806), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 169/255 (66%), Positives = 189/255 (74%), Gaps = 15/255 (5%)

Query: 1   MSSADTVNVNSAETAKEPVPGPSVEAKQDDTGGEVKAQVDAMWEQMNKGVSSKTLNSFTN 60
           MSSADT+N NSA++ KEPVPG S+E KQD T  EVKA+VDA+WEQMNKGVS+K ++SF +
Sbjct: 1   MSSADTINGNSAKSVKEPVPGTSLEPKQDVT--EVKAEVDAIWEQMNKGVSNKVISSFKS 58

Query: 61  XXXXXXXXXXXXXXXNWMSYLGLAPIGNEPHGSAASQIGPGVLQNSENDEAKKNSXXXXX 120
                          NWMSYLGLAP   E  G  ASQ  PGVL+ S +DE KK       
Sbjct: 59  KPKSTAKKRSS----NWMSYLGLAPKATESPGQCASQSVPGVLEGSTSDEGKK------- 107

Query: 121 XXXXXXXXXXXXXXXXTSSAGRGKVVITEVRDFAGQEIEIKKLLDADSKEASERAKAPAP 180
                            S++ RGKVVITEVRDFAG+EIE KKL+D+DSKEA ERAKAPAP
Sbjct: 108 --FAAAALAAVKDDSFVSASSRGKVVITEVRDFAGKEIEYKKLVDSDSKEAIERAKAPAP 165

Query: 181 SRVDAVLEQIKKKQKLSVLDKTKKDWGEYKEENKGLEDELDAYKKSSNQYLDKVNFLQRT 240
           S VDAVLEQIKKK KLSVLDKTKKDWGE+KEENKGLE+ELD YKKSSNQYLDKV+FLQRT
Sbjct: 166 SAVDAVLEQIKKKAKLSVLDKTKKDWGEFKEENKGLENELDTYKKSSNQYLDKVSFLQRT 225

Query: 241 DYREFERERDARLAL 255
           DYREFERERDARLAL
Sbjct: 226 DYREFERERDARLAL 240


>Medtr4g123060.1 | craniofacial development protein | HC |
           chr4:50793430-50795716 | 20130731
          Length = 272

 Score =  275 bits (703), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 147/222 (66%), Positives = 163/222 (73%), Gaps = 13/222 (5%)

Query: 34  EVKAQVDAMWEQMNKGVSSKTLNSFTNXXXXXXXXXXXXXXXNWMSYLGLAPIGNEPHGS 93
           EVKA+VDA+WEQMNKGVS+K ++SF +               NWMSYLGLAP   E  G 
Sbjct: 51  EVKAEVDAIWEQMNKGVSNKVISSFKSKPKSTAKKRSS----NWMSYLGLAPKATESPGQ 106

Query: 94  AASQIGPGVLQNSENDEAKKNSXXXXXXXXXXXXXXXXXXXXXTSSAGRGKVVITEVRDF 153
            ASQ  PGVL+ S +DE KK                        S++ RGKVVITEVRDF
Sbjct: 107 CASQSVPGVLEGSTSDEGKK---------FAAAALAAVKDDSFVSASSRGKVVITEVRDF 157

Query: 154 AGQEIEIKKLLDADSKEASERAKAPAPSRVDAVLEQIKKKQKLSVLDKTKKDWGEYKEEN 213
           AG+EIE KKL+D+DSKEA ERAKAPAPS VDAVLEQIKKK KLSVLDKTKKDWGE+KEEN
Sbjct: 158 AGKEIEYKKLVDSDSKEAIERAKAPAPSAVDAVLEQIKKKAKLSVLDKTKKDWGEFKEEN 217

Query: 214 KGLEDELDAYKKSSNQYLDKVNFLQRTDYREFERERDARLAL 255
           KGLE+ELD YKKSSNQYLDKV+FLQRTDYREFERERDARLAL
Sbjct: 218 KGLENELDTYKKSSNQYLDKVSFLQRTDYREFERERDARLAL 259


>Medtr4g123060.3 | craniofacial development protein | HC |
           chr4:50793388-50795716 | 20130731
          Length = 210

 Score =  256 bits (653), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 137/210 (65%), Positives = 151/210 (71%), Gaps = 13/210 (6%)

Query: 46  MNKGVSSKTLNSFTNXXXXXXXXXXXXXXXNWMSYLGLAPIGNEPHGSAASQIGPGVLQN 105
           MNKGVS+K ++SF +               NWMSYLGLAP   E  G  ASQ  PGVL+ 
Sbjct: 1   MNKGVSNKVISSFKSKPKSTAKKRSS----NWMSYLGLAPKATESPGQCASQSVPGVLEG 56

Query: 106 SENDEAKKNSXXXXXXXXXXXXXXXXXXXXXTSSAGRGKVVITEVRDFAGQEIEIKKLLD 165
           S +DE KK                        S++ RGKVVITEVRDFAG+EIE KKL+D
Sbjct: 57  STSDEGKK---------FAAAALAAVKDDSFVSASSRGKVVITEVRDFAGKEIEYKKLVD 107

Query: 166 ADSKEASERAKAPAPSRVDAVLEQIKKKQKLSVLDKTKKDWGEYKEENKGLEDELDAYKK 225
           +DSKEA ERAKAPAPS VDAVLEQIKKK KLSVLDKTKKDWGE+KEENKGLE+ELD YKK
Sbjct: 108 SDSKEAIERAKAPAPSAVDAVLEQIKKKAKLSVLDKTKKDWGEFKEENKGLENELDTYKK 167

Query: 226 SSNQYLDKVNFLQRTDYREFERERDARLAL 255
           SSNQYLDKV+FLQRTDYREFERERDARLAL
Sbjct: 168 SSNQYLDKVSFLQRTDYREFERERDARLAL 197