Miyakogusa Predicted Gene

Lj4g3v2250360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2250360.1 tr|B1GYI0|B1GYI0_NICSY Domains rearranged
methyltransferase (Fragment) OS=Nicotiana sylvestris
GN=dr,40.65,3e-18,no description,NULL;
S-adenosyl-L-methionine-dependent methyltransferases,NULL; DNA
(CYTOSINE-5-)-ME,CUFF.50714.1
         (317 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g123600.1 | DNA methyltransferase, putative | HC | chr4:50...   509   e-144
Medtr5g019420.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC...   287   1e-77
Medtr3g011150.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC...   286   2e-77
Medtr5g019420.2 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC...   286   2e-77
Medtr6g005580.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC...   281   7e-76

>Medtr4g123600.1 | DNA methyltransferase, putative | HC |
           chr4:50895545-50887895 | 20130731
          Length = 723

 Score =  509 bits (1310), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 237/322 (73%), Positives = 277/322 (86%), Gaps = 6/322 (1%)

Query: 1   MAAKRPFFLYGNVANISYDSWVKLSQFLYGVEPEFVNNQLFSALNRIEGYIHNLPVENRF 60
           +AAK PFFL+GNV+NI+YDSW K+SQFLY +EPEFVN +LFSALNRIEGYIHNLP ENRF
Sbjct: 401 VAAKPPFFLFGNVSNITYDSWKKMSQFLYCIEPEFVNTELFSALNRIEGYIHNLPTENRF 460

Query: 61  HILPKPPMTIEDVLPRTKKWWPPWDSRKQLSCINCETRGVAQLCDRLGKFLADSGGVPSS 120
            ILPKPPMTIED +PRTKKWWPPWDSRK+L+C  CET G+ QLCDRLG+ LA+SGG+ +S
Sbjct: 461 QILPKPPMTIEDAIPRTKKWWPPWDSRKKLNCNYCETGGITQLCDRLGRALANSGGILTS 520

Query: 121 EQQRDILRYCRGLNLVWTGKYKLGPVEPEHLELILGYPSNHVGSVESDLAERLKSLKYCF 180
           +QQ+DILRYCRGLNLVWTGKYKLGP+EPEHL+ ILGYP NH  + E DL ERL+ LK+ F
Sbjct: 521 QQQKDILRYCRGLNLVWTGKYKLGPIEPEHLDHILGYPLNHTRTDECDLTERLQLLKHSF 580

Query: 181 QTDTLGYHLSVLKPVFPSGLTMLSLFSGIGGAEIALHRLGIKIKALVSVETSEKKRRILE 240
           QTDTLGYHLSVLKP+FP+G+T+LS+FSGIGGAE+ALHRLGIKIKALVSVETS  KR+ILE
Sbjct: 581 QTDTLGYHLSVLKPIFPTGVTLLSIFSGIGGAEVALHRLGIKIKALVSVETSATKRKILE 640

Query: 241 RWWRSSGQTGTLVQIEEIQKLTSKKLQSLISKLGGFDLVIYQSP------SPRGGESIAS 294
           +WWRSSGQ+GTLVQIEEIQKLTSKK ++LI+  G FDLVIYQ+P       P     +++
Sbjct: 641 KWWRSSGQSGTLVQIEEIQKLTSKKFENLINNFGVFDLVIYQNPCSQPIVRPHQVGGLSA 700

Query: 295 VDFSVFHECVRVLHRVRGLCER 316
           V+FS F E VR+L RVR LCER
Sbjct: 701 VEFSAFCESVRILQRVRALCER 722


>Medtr5g019420.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC |
           chr5:7318299-7325230 | 20130731
          Length = 590

 Score =  287 bits (734), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 140/321 (43%), Positives = 201/321 (62%), Gaps = 10/321 (3%)

Query: 6   PFFLYGNVANISYDSWVKLSQFLYGVEPEFVNNQLFSALNRIEGYIHNLPVENRFHILPK 65
           P+F Y NVA      W  +S+FLY V+PE+V+++ F A  R  GY+HNLP+ NRF +LP 
Sbjct: 270 PYFYYENVALTPKGVWQTISRFLYDVQPEYVDSKYFCAAARKRGYVHNLPIANRFPLLPL 329

Query: 66  PPMTIEDVLPRTKKWWPPWDSRKQLSCINCETRGVAQLCDRLGKFL--ADSGGVPSSEQQ 123
           PP TI D  P  +KWWP WD RK L+C+     G AQ  DR+ K L   +    PS   +
Sbjct: 330 PPRTILDAFPLLRKWWPSWDPRKNLNCLQT-VHGSAQTTDRIRKKLESCEEFEEPSESVK 388

Query: 124 RDILRYCRGLNLVWTGKYKLGPVEPEHLELILGYPSNHVGSVESDLAERLKSLKYCFQTD 183
           + +L  CR  NLVW GK K+ P+EP+ +E++LG+P NH         +R KSL   FQ D
Sbjct: 389 KYVLEQCRKWNLVWVGKNKVAPLEPDEVEMLLGFPRNHTRGGGISRTDRFKSLGNSFQVD 448

Query: 184 TLGYHLSVLKPVFPSGLTMLSLFSGIGGAEIALHRLGIKIKALVSVETSEKKRRILERWW 243
           T+ YHLSVLK ++P+G+ +LSLFSGIGGAE+ALHRLG+ +  +VSVE SE  R I+  WW
Sbjct: 449 TVAYHLSVLKEMYPNGINLLSLFSGIGGAEVALHRLGVPLNNVVSVEKSEVNRNIVRSWW 508

Query: 244 RSSGQTGTLVQIEEIQKLTSKKLQSLISKLGGFDLVIYQSPSPR--GGESIASV-----D 296
             + Q G L+ I+++Q+L +++L+ L+S  GGFDLV+  SP     G   ++ +     +
Sbjct: 509 EQTNQKGNLIDIDDVQQLDAERLEQLMSACGGFDLVVGGSPCNNLAGSNRVSRIGLEGTE 568

Query: 297 FSVFHECVRVLHRVRGLCERM 317
            ++F++  R+L  V+ +  R 
Sbjct: 569 SALFYDYFRILDLVKAMAPRF 589


>Medtr3g011150.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC |
           chr3:2719044-2714206 | 20130731
          Length = 590

 Score =  286 bits (732), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 140/321 (43%), Positives = 201/321 (62%), Gaps = 10/321 (3%)

Query: 6   PFFLYGNVANISYDSWVKLSQFLYGVEPEFVNNQLFSALNRIEGYIHNLPVENRFHILPK 65
           P+F Y NVA      W K+S+FLY V+PE+V+++ F A  R  GY+HNLP+ NRF +LP 
Sbjct: 270 PYFYYENVAITPKGVWQKISRFLYDVQPEYVDSKYFCAAARKRGYVHNLPIANRFPLLPL 329

Query: 66  PPMTIEDVLPRTKKWWPPWDSRKQLSCINCETRGVAQLCDRLGKFL--ADSGGVPSSEQQ 123
           PP TI D  P  ++WWP WD RK L+C+     G AQ  DR+ K L   +    PS   +
Sbjct: 330 PPRTILDAFPPLRRWWPSWDPRKNLNCLQT-VHGSAQTTDRIRKKLESCEEFEEPSESVK 388

Query: 124 RDILRYCRGLNLVWTGKYKLGPVEPEHLELILGYPSNHVGSVESDLAERLKSLKYCFQTD 183
           + +L  CR  NLVW GK K+ P+EP+ +E++LG+P NH         +R KSL   FQ D
Sbjct: 389 KYVLEQCRKWNLVWVGKNKVAPLEPDEVEMLLGFPKNHTRGGGISRTDRFKSLGNSFQVD 448

Query: 184 TLGYHLSVLKPVFPSGLTMLSLFSGIGGAEIALHRLGIKIKALVSVETSEKKRRILERWW 243
           T+ YHLSVLK ++P+G+ +LSLFSGIGGAE+ALHRLG+ +  +VSVE SE  R I+  WW
Sbjct: 449 TVAYHLSVLKEMYPNGINLLSLFSGIGGAEVALHRLGVPLNNVVSVEKSEVNRNIVRSWW 508

Query: 244 RSSGQTGTLVQIEEIQKLTSKKLQSLISKLGGFDLVIYQSPSPR--GGESIASV-----D 296
             + Q G L+ ++++Q L +++L+ L+S  GGFDLVI  SP     G   ++ +     +
Sbjct: 509 DQTNQKGNLIDLDDVQHLDAERLEQLMSACGGFDLVIGGSPCNNLAGSNRVSRIGLEGTE 568

Query: 297 FSVFHECVRVLHRVRGLCERM 317
            ++F++  R+L  V+ +  R 
Sbjct: 569 SALFYDYFRILDLVKAMAPRF 589


>Medtr5g019420.2 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC |
           chr5:7320468-7325119 | 20130731
          Length = 528

 Score =  286 bits (732), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 140/321 (43%), Positives = 201/321 (62%), Gaps = 10/321 (3%)

Query: 6   PFFLYGNVANISYDSWVKLSQFLYGVEPEFVNNQLFSALNRIEGYIHNLPVENRFHILPK 65
           P+F Y NVA      W  +S+FLY V+PE+V+++ F A  R  GY+HNLP+ NRF +LP 
Sbjct: 208 PYFYYENVALTPKGVWQTISRFLYDVQPEYVDSKYFCAAARKRGYVHNLPIANRFPLLPL 267

Query: 66  PPMTIEDVLPRTKKWWPPWDSRKQLSCINCETRGVAQLCDRLGKFL--ADSGGVPSSEQQ 123
           PP TI D  P  +KWWP WD RK L+C+     G AQ  DR+ K L   +    PS   +
Sbjct: 268 PPRTILDAFPLLRKWWPSWDPRKNLNCLQT-VHGSAQTTDRIRKKLESCEEFEEPSESVK 326

Query: 124 RDILRYCRGLNLVWTGKYKLGPVEPEHLELILGYPSNHVGSVESDLAERLKSLKYCFQTD 183
           + +L  CR  NLVW GK K+ P+EP+ +E++LG+P NH         +R KSL   FQ D
Sbjct: 327 KYVLEQCRKWNLVWVGKNKVAPLEPDEVEMLLGFPRNHTRGGGISRTDRFKSLGNSFQVD 386

Query: 184 TLGYHLSVLKPVFPSGLTMLSLFSGIGGAEIALHRLGIKIKALVSVETSEKKRRILERWW 243
           T+ YHLSVLK ++P+G+ +LSLFSGIGGAE+ALHRLG+ +  +VSVE SE  R I+  WW
Sbjct: 387 TVAYHLSVLKEMYPNGINLLSLFSGIGGAEVALHRLGVPLNNVVSVEKSEVNRNIVRSWW 446

Query: 244 RSSGQTGTLVQIEEIQKLTSKKLQSLISKLGGFDLVIYQSPSPR--GGESIASV-----D 296
             + Q G L+ I+++Q+L +++L+ L+S  GGFDLV+  SP     G   ++ +     +
Sbjct: 447 EQTNQKGNLIDIDDVQQLDAERLEQLMSACGGFDLVVGGSPCNNLAGSNRVSRIGLEGTE 506

Query: 297 FSVFHECVRVLHRVRGLCERM 317
            ++F++  R+L  V+ +  R 
Sbjct: 507 SALFYDYFRILDLVKAMAPRF 527


>Medtr6g005580.1 | DNA (cytosine-5)-methyltransferase DRM1/2 | HC |
           chr6:838285-828430 | 20130731
          Length = 588

 Score =  281 bits (718), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 143/328 (43%), Positives = 198/328 (60%), Gaps = 16/328 (4%)

Query: 2   AAKRPFFLYGNVANISYDSWVKLSQFLYGVEPEFVNNQLFSALNRIEGYIHNLPVENRFH 61
           A   P+F Y NVA      W  +S+FLY VEPE+V+++ F A  R  GYIHNLP+ NRF 
Sbjct: 264 AVGPPYFYYENVALAPKGVWQTISRFLYDVEPEYVDSKYFCAAARKRGYIHNLPIVNRFP 323

Query: 62  ILPKPPMTIEDVLPRTKKWWPPWDSRKQLSCINCETRGVAQLCDRLGKFL--ADSGGVPS 119
           +LP PP TI D  P  ++WWP WD R +L+C+       A+L DR+ K +   D    PS
Sbjct: 324 LLPLPPRTIHDAFPLLRRWWPTWDPRTKLNCLQT-VHASAKLTDRIRKAVESCDDFEEPS 382

Query: 120 SEQQRDILRYCRGLNLVWTGKYKLGPVEPEHLELILGYPSNHVGSVESDLAERLKSLKYC 179
              ++ +L  CR  NLVW GK K+ P+EP+ +E++LG+P NH         +R KSL   
Sbjct: 383 ETVKKYVLDQCRKWNLVWVGKNKVAPLEPDEVEMLLGFPRNHTRGGGISRTDRFKSLGNS 442

Query: 180 FQTDTLGYHLSVLKPVFPSGLTMLSLFSGIGGAEIALHRLGIKIKALVSVETSEKKRRIL 239
           FQ DT+ YHLSVLK ++P G+ +LSLFSGIGGAE+ALHRLGI ++ +VSVE SE  R I+
Sbjct: 443 FQVDTVAYHLSVLKEMYPKGVNLLSLFSGIGGAEVALHRLGIPLRNVVSVEKSEVNRNIV 502

Query: 240 ERWWRSSGQTGTLVQIEEIQKLTSKKLQSLISKLGGFDLVIYQSP----------SPRGG 289
             WW  + Q G LV  +++Q+L + +L+ L+   GGFDL++  SP          S  G 
Sbjct: 503 RSWWEQTNQRGNLVDFDDVQQLDADRLERLMGAFGGFDLIVGGSPCNNLAGSNRVSRNGL 562

Query: 290 ESIASVDFSVFHECVRVLHRVRGLCERM 317
           E   S+   +F+E  R+L  V+ +  R 
Sbjct: 563 EGSESI---LFYEYFRILDLVKVMAPRF 587