Miyakogusa Predicted Gene

Lj4g3v2250350.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2250350.1 Non Characterized Hit- tr|K3Z4F0|K3Z4F0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si021418,36.64,3e-17,seg,NULL,CUFF.50713.1
         (329 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g123600.1 | DNA methyltransferase, putative | HC | chr4:50...   356   2e-98
Medtr0336s0070.1 | hypothetical protein | HC | scaffold0336:1778...   118   9e-27

>Medtr4g123600.1 | DNA methyltransferase, putative | HC |
           chr4:50895545-50887895 | 20130731
          Length = 723

 Score =  356 bits (914), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 205/337 (60%), Positives = 236/337 (70%), Gaps = 25/337 (7%)

Query: 1   MAGSSSGRGGKNGMDLTVXXXXXXXXXXXXXXXXXXPEPPYTTTFSRDVGDNVASSSGSK 60
           M G+S+GRGGKN +                         PYT   SRD  +  ASSSGSK
Sbjct: 1   MTGTSNGRGGKNPVFPKTEDFDYELS-------------PYTA-LSRDFRETAASSSGSK 46

Query: 61  LRSFFIGMGFLPSLVDKVIEENGEGNSDTLLEILLRSARKSNGDSSDFLEGSLNTSKGRR 120
           +R FFIGMGFLP LVDKVIEENGE NSD LLEILLR +  +NGDSSD LEGSLNT++  R
Sbjct: 47  VRGFFIGMGFLPGLVDKVIEENGEENSDALLEILLRCS--TNGDSSDSLEGSLNTNE-HR 103

Query: 121 SAPSVCPAGHSKEXXXXXXXXXXXXXXXXXXXXXXPEISMVNQPKEEVGELDDVIDDKRG 180
           S P+  P  HSKE                      PE+SM+NQPKEEV E+ + I+D RG
Sbjct: 104 SIPNFFPNAHSKEALQISNLESSDSLDSLFDDKDSPEVSMINQPKEEVDEIFEDIEDSRG 163

Query: 181 SLLRMNFSLEEVEFAINRLGDEASIPELVDFIFAAQIAKKMKRETD--DDVICYDSRNEV 238
           +LL MNFS EEVEFAI +LG++A +PELVDFIFAAQIAKKMK+E    DD+ CY    E+
Sbjct: 164 TLLMMNFSAEEVEFAIRKLGNKAPVPELVDFIFAAQIAKKMKKEEAEEDDIKCYVREKEI 223

Query: 239 SHEKLYGIMAKTLYLLEMGFSESEVSSAVDKLGPEAPISELANFIFAEQNGIDYVMEYKY 298
           S+E+L+GIMAKTL L EMGFSE+E+SSAVDKLGP+ PISELANFIFAEQNGI+YVMEYKY
Sbjct: 224 SNEQLFGIMAKTLQLFEMGFSENEISSAVDKLGPDVPISELANFIFAEQNGIEYVMEYKY 283

Query: 299 P------WIKEEQHSDMYDTAEVKPEDFSDEPSQSRQ 329
           P      WIKEE+ SDMY TAEVK EDFS EPSQSRQ
Sbjct: 284 PSGPSYSWIKEEEQSDMYGTAEVKVEDFSHEPSQSRQ 320


>Medtr0336s0070.1 | hypothetical protein | HC |
           scaffold0336:17788-19350 | 20130731
          Length = 168

 Score =  118 bits (295), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 74/133 (55%), Positives = 84/133 (63%), Gaps = 17/133 (12%)

Query: 1   MAGSSSGRGGKNGMDLTVXXXXXXXXXXXXXXXXXXPEPPYTTTFSRDVGDNVASSSGSK 60
           M G+S+GRGGKN +                         PYT   SRD  +  ASSSGSK
Sbjct: 22  MTGTSNGRGGKNPVFPKTEDFDYELS-------------PYTA-LSRDFRETAASSSGSK 67

Query: 61  LRSFFIGMGFLPSLVDKVIEENGEGNSDTLLEILLRSARKSNGDSSDFLEGSLNTSKGRR 120
           +R FFIGMGFLP LVDKVIEENGE NSD LLEILLR +  +NGDSSD LEGSLNT++  R
Sbjct: 68  VRGFFIGMGFLPGLVDKVIEENGEENSDALLEILLRCS--TNGDSSDSLEGSLNTNE-HR 124

Query: 121 SAPSVCPAGHSKE 133
           S P+  P  HSKE
Sbjct: 125 SIPNFFPNAHSKE 137