Miyakogusa Predicted Gene

Lj4g3v2250180.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2250180.2 Non Characterized Hit- tr|D7T677|D7T677_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,34.84,0.000000000000001,CG_1,CG-1 DNA-binding domain,CUFF.50566.2
         (210 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g123740.1 | calmodulin-binding transcription activator, pu...    80   1e-15

>Medtr4g123740.1 | calmodulin-binding transcription activator,
           putative | LC | chr4:51001330-50998526 | 20130731
          Length = 270

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/130 (50%), Positives = 80/130 (61%), Gaps = 15/130 (11%)

Query: 1   MLDEQLEHIVLVHYRKVKEGCKSGI-TKLPVVPVTLVGSSRSGSAPFSNKISSPTCV-VQ 58
           MLDEQ + IVLVHY    EG KSGI + L VVPVTL GSS    +  S+  +S     VQ
Sbjct: 48  MLDEQFKDIVLVHY---GEGRKSGIFSHLHVVPVTLGGSSSHSGSVPSSSKTSSPISDVQ 104

Query: 59  TSLTPTANKDDLNGQASEYEEDNSLNGP-----HAQPISNPMPHSAPQLADEATG---LL 110
            SLT  AN+ D + +ASEY E+  L  P     HAQ  ++ + H APQLA EATG   L+
Sbjct: 105 VSLTSNANEIDKH-RASEY-ENVELQNPSQVYSHAQSTNSSIHHCAPQLAHEATGFSQLM 162

Query: 111 RNPIMSSWTS 120
           RNPI+SSW S
Sbjct: 163 RNPIISSWRS 172