Miyakogusa Predicted Gene

Lj4g3v2249020.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2249020.1 tr|Q2VJ44|Q2VJ44_9ROSA Cold acclimation-induced
protein OS=Morus mongolica PE=2 SV=1,36.25,1e-18,seg,NULL,CUFF.50552.1
         (302 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g123950.2 | group 3 LEA protein | HC | chr4:51113248-51111...   159   4e-39
Medtr4g123950.1 | group 3 LEA protein | HC | chr4:51113248-51111...   157   9e-39
Medtr2g014040.1 | late embryogenesis abundant domain protein, pu...    66   4e-11
Medtr1g061730.1 | late embryogenesis abundant protein, putative ...    50   3e-06
Medtr2g014050.1 | late embryogenesis abundant domain protein | H...    50   4e-06

>Medtr4g123950.2 | group 3 LEA protein | HC | chr4:51113248-51111106
           | 20130731
          Length = 463

 Score =  159 bits (401), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 129/271 (47%), Positives = 160/271 (59%), Gaps = 87/271 (32%)

Query: 112 EYASDTAQKIK----DYATGSAEKTKDYAGDAAQKTKDYAGDAAQKPTDYA---TEKTKE 164
           EYA+D AQK      +YATG+A K+K+YAGDAAQKTK+YAGDA +K  +YA    +KTK+
Sbjct: 200 EYATDAAQKAAQKAKEYATGAAHKSKEYAGDAAQKTKEYAGDATEKTKEYAGDAAQKTKD 259

Query: 165 YAGGATEKTKEYAGDAAQKSKEYAGDAAQ-------KARDTANDAAQ------------- 204
           YAGGAT+K+KEYA DAA KSKEYAGDAAQ       K +D A DAA+             
Sbjct: 260 YAGGATQKSKEYATDAAYKSKEYAGDAAQMAKDAAYKTKDYAGDAAEKTKDYGSDAAQKA 319

Query: 205 -----KSKEYAGDAAQKSKD----------------------TAQESKEYAGDAAQKIKE 237
                K+K+YAGDAA+K+KD                       A +SK+YAGDAAQK KE
Sbjct: 320 KDAAYKTKDYAGDAAEKTKDAAYKTKDYAGDATEKTREYANAAAYKSKDYAGDAAQKTKE 379

Query: 238 ASSYASDTS-----------QKTKEKLQEVASGASEYSAEKAR-----------DMTNAV 275
           AS YA+DT+           QKTK K+Q+VASG  E+SAEKA+           ++ NA 
Sbjct: 380 ASEYANDTTQKTAKYGADTAQKTKNKIQDVASGTGEHSAEKAKEVKDTAAEKASNIANAA 439

Query: 276 KDT----FEAARQKSQEMKDSAGGQRRDAEL 302
           K+T    +EAA+QK        GGQRRD EL
Sbjct: 440 KETIASNYEAAKQK-------LGGQRRDPEL 463



 Score =  147 bits (370), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/289 (41%), Positives = 155/289 (53%), Gaps = 56/289 (19%)

Query: 19  CNCSSVGHMPSNTEEAQDFEEVKVKAGETANKAAETAYKAGETEEK-------------- 64
           C  SSVGH+PSN +E +DF++VK K  ETANKA+ET  +  E  E               
Sbjct: 22  CKSSSVGHIPSNEDEGRDFQDVKAKTMETANKASETGKEGKEAAETWTEWAKEKITEGLG 81

Query: 65  ---QGKDSTT-GSWTEWAKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSE----YASD 116
              + KDSTT    +E+A +                              +E    YA D
Sbjct: 82  FKDKDKDSTTTDKASEYASDAAHKTKHYADETAHKSKETAQKASDHAHDAAEKTKGYAWD 141

Query: 117 TAQKIKDYATGSAEKTK-------------------DYAGDAAQKTKDYAGDAAQKPTDY 157
            ++KI+DYAT ++EKTK                   D+AG+A  K  +Y G AAQK  +Y
Sbjct: 142 ASKKIRDYATDASEKTKHYAADESYADDDDDAEDNRDFAGEAIHKAGEYTGSAAQKAKEY 201

Query: 158 ATEKTK-------EYAGGATEKTKEYAGDAAQKSKEYAGDAAQKARDTANDAAQKSKEYA 210
           AT+  +       EYA GA  K+KEYAGDAAQK+KEYAGDA +K ++ A DAAQK+K+YA
Sbjct: 202 ATDAAQKAAQKAKEYATGAAHKSKEYAGDAAQKTKEYAGDATEKTKEYAGDAAQKTKDYA 261

Query: 211 GDAAQKSK----DTAQESKEYAGDAAQKIKEAS----SYASDTSQKTKE 251
           G A QKSK    D A +SKEYAGDAAQ  K+A+     YA D ++KTK+
Sbjct: 262 GGATQKSKEYATDAAYKSKEYAGDAAQMAKDAAYKTKDYAGDAAEKTKD 310


>Medtr4g123950.1 | group 3 LEA protein | HC | chr4:51113248-51111106
           | 20130731
          Length = 514

 Score =  157 bits (398), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 124/246 (50%), Positives = 150/246 (60%), Gaps = 67/246 (27%)

Query: 112 EYASDTAQKIKDYATGSAEKTKDYAGDAAQKTKDY------------------AGDAAQK 153
           EYA D AQ  KD    +A KTKDYAGDAA+KTKDY                  AGDAA+K
Sbjct: 281 EYAGDAAQMAKD----AAYKTKDYAGDAAEKTKDYGSDAAQKAKDAAYKTKDYAGDAAEK 336

Query: 154 PTDYATEKTKEYAGGATEKTKEYAGDAAQKSKEYAGDAAQKARDT-------ANDAAQKS 206
             D A  KTK+YAG ATEKT+EYA  AA KSK+YAGDAA+K +D        A +AAQK+
Sbjct: 337 TKD-AAYKTKDYAGDATEKTREYANAAAYKSKDYAGDAAEKTKDAAYKTKDYAGEAAQKA 395

Query: 207 KEYAGDAAQKSK----DTAQESKEYAGDAAQKIKEASSYASDTS-----------QKTKE 251
           K+YAGDAA  ++    D A +SK+YAGDAAQK KEAS YA+DT+           QKTK 
Sbjct: 396 KDYAGDAAHNTREYANDAAYKSKDYAGDAAQKTKEASEYANDTTQKTAKYGADTAQKTKN 455

Query: 252 KLQEVASGASEYSAEKAR-----------DMTNAVKDT----FEAARQKSQEMKDSAGGQ 296
           K+Q+VASG  E+SAEKA+           ++ NA K+T    +EAA+QK        GGQ
Sbjct: 456 KIQDVASGTGEHSAEKAKEVKDTAAEKASNIANAAKETIASNYEAAKQK-------LGGQ 508

Query: 297 RRDAEL 302
           RRD EL
Sbjct: 509 RRDPEL 514



 Score =  146 bits (369), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 119/289 (41%), Positives = 155/289 (53%), Gaps = 56/289 (19%)

Query: 19  CNCSSVGHMPSNTEEAQDFEEVKVKAGETANKAAETAYKAGETEEK-------------- 64
           C  SSVGH+PSN +E +DF++VK K  ETANKA+ET  +  E  E               
Sbjct: 22  CKSSSVGHIPSNEDEGRDFQDVKAKTMETANKASETGKEGKEAAETWTEWAKEKITEGLG 81

Query: 65  ---QGKDSTT-GSWTEWAKERXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSE----YASD 116
              + KDSTT    +E+A +                              +E    YA D
Sbjct: 82  FKDKDKDSTTTDKASEYASDAAHKTKHYADETAHKSKETAQKASDHAHDAAEKTKGYAWD 141

Query: 117 TAQKIKDYATGSAEKTK-------------------DYAGDAAQKTKDYAGDAAQKPTDY 157
            ++KI+DYAT ++EKTK                   D+AG+A  K  +Y G AAQK  +Y
Sbjct: 142 ASKKIRDYATDASEKTKHYAADESYADDDDDAEDNRDFAGEAIHKAGEYTGSAAQKAKEY 201

Query: 158 ATEKTK-------EYAGGATEKTKEYAGDAAQKSKEYAGDAAQKARDTANDAAQKSKEYA 210
           AT+  +       EYA GA  K+KEYAGDAAQK+KEYAGDA +K ++ A DAAQK+K+YA
Sbjct: 202 ATDAAQKAAQKAKEYATGAAHKSKEYAGDAAQKTKEYAGDATEKTKEYAGDAAQKTKDYA 261

Query: 211 GDAAQKSK----DTAQESKEYAGDAAQKIKEAS----SYASDTSQKTKE 251
           G A QKSK    D A +SKEYAGDAAQ  K+A+     YA D ++KTK+
Sbjct: 262 GGATQKSKEYATDAAYKSKEYAGDAAQMAKDAAYKTKDYAGDAAEKTKD 310



 Score =  131 bits (330), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/205 (50%), Positives = 138/205 (67%), Gaps = 26/205 (12%)

Query: 112 EYASDTAQKIK----DYATGSAEKTKDYAGDAAQKTKDYAGDAAQKPTDYA---TEKTKE 164
           EYA+D AQK      +YATG+A K+K+YAGDAAQKTK+YAGDA +K  +YA    +KTK+
Sbjct: 200 EYATDAAQKAAQKAKEYATGAAHKSKEYAGDAAQKTKEYAGDATEKTKEYAGDAAQKTKD 259

Query: 165 YAGGATEKTKEYAGDAAQKSKEYAGDAAQKARDTANDAAQKSKEYAGDAAQKSKD----- 219
           YAGGAT+K+KEYA DAA KSKEYAGDAAQ A+    DAA K+K+YAGDAA+K+KD     
Sbjct: 260 YAGGATQKSKEYATDAAYKSKEYAGDAAQMAK----DAAYKTKDYAGDAAEKTKDYGSDA 315

Query: 220 ------TAQESKEYAGDAAQKIKEAS----SYASDTSQKTKEKLQEVASGASEYSAEKAR 269
                  A ++K+YAGDAA+K K+A+     YA D ++KT+E     A  + +Y+ + A 
Sbjct: 316 AQKAKDAAYKTKDYAGDAAEKTKDAAYKTKDYAGDATEKTREYANAAAYKSKDYAGDAAE 375

Query: 270 DMTNAVKDTFEAARQKSQEMKDSAG 294
              +A   T + A + +Q+ KD AG
Sbjct: 376 KTKDAAYKTKDYAGEAAQKAKDYAG 400


>Medtr2g014040.1 | late embryogenesis abundant domain protein,
           putative | HC | chr2:3894264-3895843 | 20130731
          Length = 348

 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 101/178 (56%), Gaps = 25/178 (14%)

Query: 110 VSEYASDTAQKIKDYATGSAEKTKDYAGDAAQKTKD-------YAGDAAQKPTDYATE-- 160
           + +Y+ D  + IK +A  + EKTKD AG   +K K+        A +A +K  DYA E  
Sbjct: 89  IKQYSRDANEDIKQFARDTNEKTKDAAGSMWEKAKEGTDRAAEKAENAGEKARDYAYEVK 148

Query: 161 -KTKEYAGGATEKTK-------EYAGDAAQKSKEYAGDAAQKARDTANDAAQKSKEYAGD 212
            +T E AG   +K +       E A +A +K+++YA DA ++ +D A +A +  ++YA D
Sbjct: 149 DRTNEAAGSVWDKAREGTNRAAEKAENAGEKARDYAYDAKERTKDAAENAGESIRDYAYD 208

Query: 213 AAQKSKDTA----QESKEYAGDAAQKIKEASSYASDTS----QKTKEKLQEVASGASE 262
           A  ++K+ A    +++++YA DA ++ KE +SY +D +    +KT EK  EVA  A+E
Sbjct: 209 AKDRTKEAAESAGEKARDYAYDAKERTKEGASYMADKTKEGAEKTAEKTGEVAGSATE 266



 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 100/193 (51%), Gaps = 27/193 (13%)

Query: 121 IKDYATGSAEKTKDYAGDAAQKTKDYAGDAAQKPTDYATEKTKEYAGGATEKTKEYAGDA 180
           IK Y+  + E  K +A D  +KTKD AG   +K  +  T++  E A  A EK ++YA + 
Sbjct: 89  IKQYSRDANEDIKQFARDTNEKTKDAAGSMWEKAKE-GTDRAAEKAENAGEKARDYAYEV 147

Query: 181 AQKSKEYAGDAAQKARDTANDAA-------QKSKEYAGDAAQKSKDTAQES----KEYAG 229
             ++ E AG    KAR+  N AA       +K+++YA DA +++KD A+ +    ++YA 
Sbjct: 148 KDRTNEAAGSVWDKAREGTNRAAEKAENAGEKARDYAYDAKERTKDAAENAGESIRDYAY 207

Query: 230 DAAQKIKEAS--------SYASDTSQKTKE-------KLQEVASGASEYSAEKARDMTNA 274
           DA  + KEA+         YA D  ++TKE       K +E A   +E + E A   T A
Sbjct: 208 DAKDRTKEAAESAGEKARDYAYDAKERTKEGASYMADKTKEGAEKTAEKTGEVAGSATEA 267

Query: 275 VKDTFEAARQKSQ 287
           +K   E A++ +Q
Sbjct: 268 LKSAGEMAKKTAQ 280



 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 79/143 (55%), Gaps = 7/143 (4%)

Query: 112 EYASDTAQKIKDYATGSAEKTKDYAGDAAQKTKDYAGDAAQKPTDYA---TEKTKEYAGG 168
           E A D A ++KD    +A    D A +   +  + A +A +K  DYA    E+TK+ A  
Sbjct: 138 EKARDYAYEVKDRTNEAAGSVWDKAREGTNRAAEKAENAGEKARDYAYDAKERTKDAAEN 197

Query: 169 ATEKTKEYAGDAAQKSKEYAGDAAQKARDTANDAAQKSKEYAGDAAQKSKD----TAQES 224
           A E  ++YA DA  ++KE A  A +KARD A DA +++KE A   A K+K+    TA+++
Sbjct: 198 AGESIRDYAYDAKDRTKEAAESAGEKARDYAYDAKERTKEGASYMADKTKEGAEKTAEKT 257

Query: 225 KEYAGDAAQKIKEASSYASDTSQ 247
            E AG A + +K A   A  T+Q
Sbjct: 258 GEVAGSATEALKSAGEMAKKTAQ 280


>Medtr1g061730.1 | late embryogenesis abundant protein, putative |
           HC | chr1:26969966-26968527 | 20130731
          Length = 348

 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 61/179 (34%), Positives = 89/179 (49%), Gaps = 16/179 (8%)

Query: 117 TAQKIKDYATGSAEKTKDYAGDAAQKTKDYAGDAAQKPTDYATEKTKEYAGGATEKTKEY 176
           TAQK K+    + +KT +YAG A +K ++ A D A +  DYA EK KE       K  EY
Sbjct: 95  TAQKAKETKDATMQKTNEYAGYAGEKARE-AKDKAGEYKDYAAEKAKEGKDATMNKMGEY 153

Query: 177 AGDAAQKSKEYAGDAAQKARDTANDAAQKSKEYAGDAAQKSKDT----AQESKEYAGDAA 232
                   K+Y  + A++ +D   +   + K+Y  + A++ KD       E K+ A DAA
Sbjct: 154 --------KDYTAEKAKEGKDATMNKMGEYKDYTAEKAKEGKDNTAWKIGEMKDSAVDAA 205

Query: 233 QKIKEASSYASDTSQKTKEKLQEVASGASEYSAEKARDMTNAVKDTFEAARQKSQEMKD 291
              K A  Y  D  ++ K+K  E A  A + +AE A        +T EAA+QK+ E KD
Sbjct: 206 ---KRAMGYLGDKKEEAKQKTAETAEAAKQKTAETAEAAKQKTAETAEAAKQKTVEAKD 261


>Medtr2g014050.1 | late embryogenesis abundant domain protein | HC |
           chr2:3897681-3899109 | 20130731
          Length = 192

 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 4/126 (3%)

Query: 113 YASDTAQKIKDYATGSAEKTKDYAGDAAQKTKDYAGDAAQKPTDYATEKTKEYAGGATEK 172
           YA  TA K K+      +  K +  DA +KTKD A   A K  +  T+K  E  G A +K
Sbjct: 63  YADGTADKAKETVNAGIDDIKQFGQDANEKTKDAASSIADKAKE-DTDKAVEAVGSAGDK 121

Query: 173 TKEYAGDAAQKSKEYAGDAAQKARDTANDAAQKSKEYAGDAAQKSK---DTAQESKEYAG 229
            K+YA DA  K+KE  G A  KA++    A + ++E AG A +  K   D A+E+ E A 
Sbjct: 122 VKDYAYDANDKTKEAIGSATDKAKEGFEAATKNTQEAAGSATEALKNAGDQAKEAVEGAL 181

Query: 230 DAAQKI 235
           DAA+ +
Sbjct: 182 DAAKNV 187