Miyakogusa Predicted Gene
- Lj4g3v2225720.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2225720.1 Non Characterized Hit- tr|I1LDZ3|I1LDZ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8429 PE=,75.38,2e-18,no
description,Nucleic acid-binding, OB-fold; no description,NULL;
Nucleic acid-binding proteins,Nuc,CUFF.50540.1
(403 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g102670.1 | meiotic recombination protein DMC1, putative |... 99 6e-21
Medtr2g041270.1 | replication protein A 70 kDa protein | HC | ch... 74 3e-13
Medtr4g124560.1 | DNA repair RAD51-like protein | HC | chr4:5155... 65 1e-10
Medtr8g447080.1 | ICE-like protease (caspase) p20 domain protein... 65 1e-10
Medtr5g091610.1 | eukaryotic translation initiation factor eIF2A... 62 8e-10
Medtr2g063570.1 | ICE-like protease (caspase) p20 domain protein... 60 3e-09
Medtr7g088035.1 | ICE-like protease (caspase) p20 domain protein... 50 3e-06
>Medtr1g102670.1 | meiotic recombination protein DMC1, putative | HC
| chr1:46400379-46403108 | 20130731
Length = 311
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 55/65 (84%)
Query: 58 SAKRSEEPFRLLIVDSVIALFRVDFSGRGELAERQQNLFPKVYPLVKICVKFNVAVYMTN 117
+AK +EEPFRLLIVDSVIALFRVDF+GRGELAERQQ L + L+KI +FNVAVYMTN
Sbjct: 194 AAKMAEEPFRLLIVDSVIALFRVDFTGRGELAERQQKLAQMLSRLIKIAEEFNVAVYMTN 253
Query: 118 QVIVE 122
QVI +
Sbjct: 254 QVIAD 258
>Medtr2g041270.1 | replication protein A 70 kDa protein | HC |
chr2:18105202-18100698 | 20130731
Length = 627
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Query: 1 MLATQLNDQLRAGLVKRGSVVQLIEYICSPIQNRKIIVALNMETELSSIAILCDMESSAK 60
MLA QLND++ G VK+GS+VQL++YIC+P+QNRKII+ LNMET + I+ + +S
Sbjct: 57 MLAAQLNDRVNTGRVKQGSIVQLLDYICTPLQNRKIIMVLNMETIIPDCEIIGNPKSFVD 116
Query: 61 RSEEPFRLLIVDSVIA 76
SE P + + D+ +A
Sbjct: 117 -SELPVQKALPDNTVA 131
>Medtr4g124560.1 | DNA repair RAD51-like protein | HC |
chr4:51555032-51558129 | 20130731
Length = 341
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 55 MESSAKRSEEPFRLLIVDSVIALFRVDFSGRGELAERQQNLFPKVYPLVKICVKFNVAVY 114
+E+++ E F L+I+DS AL+R DFSGRGEL+ RQ +L + L K+ +F VAV
Sbjct: 207 LEAASMMVETRFALMIIDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAVV 266
Query: 115 MTNQVI--VERNLLYA 128
+TNQV+ V+ + ++A
Sbjct: 267 LTNQVVSQVDGSAMFA 282
>Medtr8g447080.1 | ICE-like protease (caspase) p20 domain protein |
HC | chr8:18452465-18454633 | 20130731
Length = 412
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 200 LVECYGFDLRNIVILLPNEKGYTQPQKEIVRSEVKSLIQESNEGDILLLHISAHVTLKYP 259
L+E YGF +I IL+ + YT+P + +R + L++ S +GD+L +H S H T + P
Sbjct: 33 LIERYGFSEDDITILIDTDSSYTEPTGKNIRRVLSELVRSSEDGDVLFVHYSGHGT-RLP 91
Query: 260 GMVG-------IPLLQTGDRQFIHADFWDKMVQCVHHRRAKLTVTLETCHAGALFNSARQ 312
G + D I D + + V V R +LT+ ++CH+G L A++
Sbjct: 92 AETGEDDDTGFDECIVPSDMNLITDDDFKEFVDGV-PRGCRLTIVSDSCHSGGLIEEAKE 150
Query: 313 Q 313
Q
Sbjct: 151 Q 151
>Medtr5g091610.1 | eukaryotic translation initiation factor eIF2A |
LC | chr5:39950473-39954377 | 20130731
Length = 270
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 9/65 (13%)
Query: 58 SAKRSEEPFRLLIVDSVIALFRVDFSGRGELAERQQNLFPKVYPLVKICVKFNVAVYMTN 117
+AK +EEPFRLLIVDSVIALF+ E +Q L + L+KI +FNVAVYMTN
Sbjct: 59 AAKMAEEPFRLLIVDSVIALFQ---------EEMRQKLAQMLSRLIKIAEEFNVAVYMTN 109
Query: 118 QVIVE 122
QVI +
Sbjct: 110 QVIAD 114
>Medtr2g063570.1 | ICE-like protease (caspase) p20 domain protein |
HC | chr2:26836843-26838886 | 20130731
Length = 401
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 18/138 (13%)
Query: 191 AELESYMN-------TLVECYGFDLRNIVILLPNEKGYTQPQKEIVRSEVKSLIQESNEG 243
AEL+ +N L+ YGF ++I +L+ + YTQP + +RS + L++ + G
Sbjct: 20 AELKGCINDVWRMHKCLIHKYGFSDKDITVLIDTDHSYTQPTGKNIRSAMSRLVRSAQPG 79
Query: 244 DILLLHISAHVTLKYPGMVGIP--------LLQTGDRQFIHADFWDKMVQCVHHRRAKLT 295
D+ +H S H T + P G ++ T DF D V+ V + ++T
Sbjct: 80 DVFFVHYSGHGT-RLPAETGEDDDTGYDECIVPTDMNLITDEDFRD-FVEKV-PKSCRIT 136
Query: 296 VTLETCHAGALFNSARQQ 313
+ ++CH+G L SA++Q
Sbjct: 137 IVSDSCHSGGLIESAKEQ 154
>Medtr7g088035.1 | ICE-like protease (caspase) p20 domain protein |
HC | chr7:34248766-34247292 | 20130731
Length = 319
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Query: 198 NTLVECYGFDLRNIVILL---PNEKGYTQPQKEIVRSEVKSLIQESNEGDILLLHISAHV 254
+TLV+ +GFD NI +L P T P ++ + S++ ++ GD+L H S H
Sbjct: 35 DTLVKRFGFDHANIQLLTDDDPKNSSSTMPTGANIKQALSSMVDKAEAGDVLYFHYSGHG 94
Query: 255 TLKYPGMVGIPLLQTGDRQFIHADF-------WDKMVQCVHHRRAKLTVTLETCHAGALF 307
T + G P + + DF + ++V + + A LT+ ++CH+G L
Sbjct: 95 TRIPSKIHGHPFRH--EEAIVPCDFNLITDLDFRQLVNRI-PKGASLTILSDSCHSGGLI 151
Query: 308 NSARQQ 313
+ ++Q
Sbjct: 152 DKEKEQ 157