Miyakogusa Predicted Gene

Lj4g3v2225710.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2225710.1 tr|Q84MB9|Q84MB9_ARATH At1g48300 OS=Arabidopsis
thaliana PE=2 SV=1,46.6,1e-18,coiled-coil,NULL; seg,NULL;
Thioredoxin-like,Thioredoxin-like fold; no
description,Thioredoxin-like ,CUFF.50542.1
         (334 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g124080.1 | hypothetical protein | HC | chr4:51241103-5124...   244   8e-65

>Medtr4g124080.1 | hypothetical protein | HC |
           chr4:51241103-51242712 | 20130731
          Length = 341

 Score =  244 bits (623), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 146/347 (42%), Positives = 180/347 (51%), Gaps = 20/347 (5%)

Query: 1   MDVSGTILRQLTYVTGAGTNAHSRGARVWAARPTARVVMGSGFSDEGHLQYYQD-KKKGK 59
           M+VSGT+LR   Y+ G GT  H+R   V   R   R+ MGSGF DEGH+QYYQD KK  +
Sbjct: 1   MEVSGTVLRHTNYIFGVGT--HTRSHGVVPRR--VRMSMGSGFHDEGHVQYYQDVKKNTE 56

Query: 60  PVVLTAKNKVKLLKRVSKGMSLFDELGFALDPNQRALLNDLQTNLTSDSGEGXXXXXXXX 119
           PV+++ K K+KLLKR SK +S   +LGFA DPN   LL+ L  NL ++ GE         
Sbjct: 57  PVIISNKKKIKLLKRFSKNVSQLPQLGFAQDPN---LLDQLHQNLITEGGEELLRELEKV 113

Query: 120 XXXXXXXXXXXXXXXXXXXXXSKMKTGPDCXXXXXXXXXXXXXXXXXCDEVVDMNTFRXX 179
                                       +                  C EVVDMNTFR  
Sbjct: 114 RAEEKELKKKMKQEKKKAKLKPSKMKTCNKSESSSSSSSESESSDSDCGEVVDMNTFRGA 173

Query: 180 XXXXXXXXXXXXXXXXXXXXXETIAXXXXXX-----------XXXXXXLKNENHGVSTAP 228
                                 +I                         K E + V    
Sbjct: 174 GVVDVATKPVDELELKLKQPMLSIPEDSTSHHHVMDVCTTNNASLVTGFKKETNVVIPTA 233

Query: 229 QKRIEVCMGNKCKKSGAAALMQQFESXXXXXXXXXXX-CKCMGKCKSAPNVRIQNAVDHE 287
           QKRIEVCMGNKCKKSGAAAL+Q+FE             CKCMGKCK+APNVRIQN+VD  
Sbjct: 234 QKRIEVCMGNKCKKSGAAALLQEFEKVVGVEGEGVVVGCKCMGKCKTAPNVRIQNSVDLN 293

Query: 288 LAEGLNDSVKVPANPLCIGVGLEDVDAVVARFLGENYQDMGMVAATT 334
           + +G++DSVK+P+NPLCIGVGLEDVD +VARFLGE+Y+D+GMVAA +
Sbjct: 294 MVQGIDDSVKIPSNPLCIGVGLEDVDTIVARFLGEDYKDVGMVAAAS 340