Miyakogusa Predicted Gene
- Lj4g3v2215340.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2215340.1 Non Characterized Hit- tr|I1LYB2|I1LYB2_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,93.57,0,Rad51,DNA
recombination and repair protein Rad51, C-terminal; no
description,NULL; seg,NULL; ATPases,CUFF.50515.1
(342 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g124560.1 | DNA repair RAD51-like protein | HC | chr4:5155... 640 0.0
Medtr1g102670.1 | meiotic recombination protein DMC1, putative |... 317 1e-86
Medtr4g111780.1 | DNA repair and recombination protein RadA | HC... 121 9e-28
Medtr4g024850.1 | DNA repair and recombination protein RadA | HC... 119 3e-27
Medtr2g445230.1 | DNA repair Rad51-like protein | HC | chr2:1969... 89 5e-18
Medtr2g093050.1 | DNA repair RAD51-like protein | HC | chr2:3962... 85 1e-16
Medtr5g091610.1 | eukaryotic translation initiation factor eIF2A... 80 4e-15
Medtr4g062540.4 | DNA repair protein RAD51 | HC | chr4:23254009-... 78 1e-14
Medtr4g062540.1 | DNA repair protein RAD51 | HC | chr4:23254009-... 75 7e-14
Medtr4g062540.5 | DNA repair protein RAD51 | HC | chr4:23254009-... 60 4e-09
Medtr4g062540.6 | DNA repair protein RAD51 | HC | chr4:23254009-... 57 2e-08
Medtr5g042180.1 | DUF4378 domain protein | LC | chr5:18554261-18... 57 2e-08
Medtr4g062540.2 | DNA repair protein RAD51 | HC | chr4:23254009-... 57 2e-08
Medtr5g027350.1 | armadillo/beta-catenin-like repeat protein, pu... 57 2e-08
Medtr4g062540.3 | DNA repair protein RAD51 | HC | chr4:23254009-... 55 1e-07
Medtr8g461220.1 | DNA repair and recombination protein | HC | ch... 51 2e-06
>Medtr4g124560.1 | DNA repair RAD51-like protein | HC |
chr4:51555032-51558129 | 20130731
Length = 341
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/342 (90%), Positives = 325/342 (95%), Gaps = 1/342 (0%)
Query: 1 MEQQRHQKTAXXXXXXXXXXXXHGPLPIEQLQASGIASIDVKKLKDAGICTVESVAYTPR 60
MEQQR +KTA HGPLP+EQLQASGIA++D+KKLKDAGICTVESVAYTPR
Sbjct: 1 MEQQRLEKTAQQHDQETEEIQ-HGPLPVEQLQASGIAALDIKKLKDAGICTVESVAYTPR 59
Query: 61 KDLLQIKGISEAKVDKIVEAASKLVPMGFTSASELHVQRESIIQITTGSRELDKILDGGI 120
KDLLQIKGIS+AKVDKI+EAA KLVPMGFTSASELH QRESIIQITTGSRELDKIL+GGI
Sbjct: 60 KDLLQIKGISDAKVDKIIEAAGKLVPMGFTSASELHAQRESIIQITTGSRELDKILEGGI 119
Query: 121 ETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR 180
ETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR
Sbjct: 120 ETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADR 179
Query: 181 FGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFAVMIVDSATALYRTDFSGRGE 240
FGLNG DVLENVAYARAYNTDHQSRLLLEAASMMVETRFA+MI+DSATALYRTDFSGRGE
Sbjct: 180 FGLNGPDVLENVAYARAYNTDHQSRLLLEAASMMVETRFALMIIDSATALYRTDFSGRGE 239
Query: 241 LSARQMHLAKFLRSLQKLADEFGVAIVITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATT 300
LSARQMHLAKFLRSLQKLADEFGVA+V+TNQVVSQVDGSA+FAGPQ+KPIGGNIMAHATT
Sbjct: 240 LSARQMHLAKFLRSLQKLADEFGVAVVLTNQVVSQVDGSAMFAGPQIKPIGGNIMAHATT 299
Query: 301 TRLALRKGRGEERICKVISSPCLAEAEARFQILAEGVSDVKD 342
TRLALRKGRGEERICKVISSPCLAEAEARFQIL EGVSDVKD
Sbjct: 300 TRLALRKGRGEERICKVISSPCLAEAEARFQILGEGVSDVKD 341
>Medtr1g102670.1 | meiotic recombination protein DMC1, putative | HC
| chr1:46400379-46403108 | 20130731
Length = 311
Score = 317 bits (811), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 163/315 (51%), Positives = 215/315 (68%), Gaps = 14/315 (4%)
Query: 28 IEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIVEAASKLVPM 87
I++L + GI + DVKKL+DAGI T + +K+L IKG+SEAKVDKI EAA KLV
Sbjct: 11 IDKLISQGINAGDVKKLQDAGIFTCNGLMMHTKKNLTGIKGLSEAKVDKICEAAEKLVNS 70
Query: 88 GFTSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHTLCVTC 147
G+ + S+ ++R+S+++ITTGS+ LD++L GGIET SITE +GEFRSGKTQL HTLCV+
Sbjct: 71 GYITGSDALLKRKSVVRITTGSQALDELLGGGIETLSITEAFGEFRSGKTQLAHTLCVST 130
Query: 148 QLPLDQGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLL 207
QLP GG GK YID EGTFRP R++ IA+RFG++ VL+N+ YARAY +HQ LL
Sbjct: 131 QLPTSMHGGNGKVAYIDTEGTFRPDRIVAIAERFGMDPGAVLDNIIYARAYTYEHQYNLL 190
Query: 208 LEAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAIV 267
L A+ M E F ++IVDS AL+R DF+GRGEL+ RQ LA+ L L K+A+EF VA+
Sbjct: 191 LGLAAKMAEEPFRLLIVDSVIALFRVDFTGRGELAERQQKLAQMLSRLIKIAEEFNVAVY 250
Query: 268 ITNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLALRKGRGEERICKVISSPCLAEAE 327
+TNQV++ G P+ KP GG+++AHA T RL RKG+GE+R
Sbjct: 251 MTNQVIADPGGGMFITDPK-KPAGGHVLAHAATIRLMFRKGKGEQR-------------R 296
Query: 328 ARFQILAEGVSDVKD 342
FQI G++D KD
Sbjct: 297 YVFQITPGGIADAKD 311
>Medtr4g111780.1 | DNA repair and recombination protein RadA | HC |
chr4:46186633-46190580 | 20130731
Length = 347
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 163/332 (49%), Gaps = 45/332 (13%)
Query: 43 KLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIVEAASK-------------LVPMGF 89
KL AG T+ S+ T L++ +SE++ +I+ A++ ++ G
Sbjct: 15 KLLAAGYTTLHSILRTSTTHLVRDIEVSESEALEILNFATRSNDLDKSSGSNTNVIDGGQ 74
Query: 90 TSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHTLCVTCQL 149
T+ L+ +R S + ITT +LD IL GGI +TE+ G GKTQ+ L V Q+
Sbjct: 75 TAWDMLNEERFSSL-ITTSCLDLDNILGGGINCKEVTEIGGVPGIGKTQIGIQLAVNVQI 133
Query: 150 PLDQGGGEGKAMYIDAEGTFRPQRLLQIAD------------------RFG--LNGADVL 189
PLD GG GKA+YID EG+F +R+LQIA+ FG ++ +L
Sbjct: 134 PLDYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDMSEYSHHFHKDNQAFGVKMHPNSIL 193
Query: 190 ENVAYARAYNTDHQSRLLLEAASMMVETR-FAVMIVDSATALYRTDFSGRGELSARQMHL 248
EN+ Y R + Q L+ + E + ++I+DS T +R DF +++ R L
Sbjct: 194 ENIFYFRVCSYTEQIALVNYLDKFVTEHKDVKIIIIDSVTFHFRQDFD---DMALRTRLL 250
Query: 249 AKFLRSLQKLADEFGVAIVITNQVVSQ-VDGSAVFAGPQVKPIGGNIMAHATTTRLALRK 307
+ L KLA +A+V+ NQV ++ ++GS Q+ G+ +H+ T R+ L
Sbjct: 251 GEMSLKLMKLAKNLSLAVVMLNQVTTKHIEGSF-----QLTLALGDSWSHSCTNRIILY- 304
Query: 308 GRGEERICKVISSPCLAEAEARFQILAEGVSD 339
G+ER + SP L A A + + + G+ +
Sbjct: 305 WNGDERHAYIDKSPSLKSASAPYSVTSRGIRN 336
>Medtr4g024850.1 | DNA repair and recombination protein RadA | HC |
chr4:8424452-8419903 | 20130731
Length = 347
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 162/332 (48%), Gaps = 45/332 (13%)
Query: 43 KLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIVEAASK-------------LVPMGF 89
KL AG T+ S+ T L + +SE++ +I+ A++ ++ G
Sbjct: 15 KLLAAGYTTLHSILRTSTTHLARDIEVSESEALEILNFATRSSDLDKSSGSNANVIHGGQ 74
Query: 90 TSASELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHTLCVTCQL 149
T+ L+ +R S + ITT +LD IL GGI +TE+ G GKTQ+ L V Q+
Sbjct: 75 TAWDMLNEERFSSL-ITTSCLDLDNILGGGINCKEVTEIGGVPGIGKTQIGIQLAVNVQI 133
Query: 150 PLDQGGGEGKAMYIDAEGTFRPQRLLQIAD------------------RFG--LNGADVL 189
PLD GG GKA+YID EG+F +R+LQIA+ FG ++ +L
Sbjct: 134 PLDYGGLGGKAIYIDTEGSFMVERVLQIAEACIEDLSEYSHHFYKDNQAFGVKMHPNSIL 193
Query: 190 ENVAYARAYNTDHQSRLLLEAASMMVETR-FAVMIVDSATALYRTDFSGRGELSARQMHL 248
EN+ Y R + Q L+ + E + ++I+DS T +R DF +++ R L
Sbjct: 194 ENIFYFRVCSYTEQIALVNYLDKFVTEHKDVKIIIIDSVTFHFRQDFD---DMALRTRLL 250
Query: 249 AKFLRSLQKLADEFGVAIVITNQVVSQ-VDGSAVFAGPQVKPIGGNIMAHATTTRLALRK 307
+ L KLA F +A+V+ NQV ++ ++GS Q+ G+ +H+ T R+ L
Sbjct: 251 GEMSLKLMKLAKNFSLAVVMLNQVTTKHIEGSF-----QLTLALGDSWSHSCTNRIILY- 304
Query: 308 GRGEERICKVISSPCLAEAEARFQILAEGVSD 339
+ER + SP L A A + + + G+ +
Sbjct: 305 WNDDERHAYIDKSPSLKSASAPYSVTSRGIRN 336
>Medtr2g445230.1 | DNA repair Rad51-like protein | HC |
chr2:19697108-19696173 | 20130731
Length = 287
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 28/273 (10%)
Query: 94 ELHVQRESIIQITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQ 153
ELH + E + + G LD+ L GGI T S+TEL E SGKTQ+C L +T QLP
Sbjct: 11 ELHQKTE---KCSVGCPVLDRYLAGGIPTKSVTELVAESGSGKTQICLQLVLTAQLPPSH 67
Query: 154 GGGEGKAMYIDAEGTFRPQRLLQIADRFGLN----GADVLENVAYARAYNTDHQSRLLLE 209
GG ++YI E F +RL Q++ F + G D L+ V Y+ + L +
Sbjct: 68 GGLSASSLYIFTEYPFPIRRLKQLSRSFLSSNPGVGTDPLDRVFLRGIYSAEKFVDFLPD 127
Query: 210 AASMMVETR-----FAVMIVDSATALYRTDFSGRG-ELSARQMHLAKFLRSLQKLADEFG 263
++ + V++VDS AL+R++F +L R K L+ LA+ FG
Sbjct: 128 IEILLTYWKSRLRPVRVIVVDSIAALFRSEFENSMLDLKRRSSLFFKISGGLKTLAERFG 187
Query: 264 VA---------IVITNQVVSQVDGSAVF-AGPQVKPIGGNIMAHATTTRLALRK-----G 308
+ ++ N+ + + S ++ +G +V P G A+ +R+ L + G
Sbjct: 188 LVVVVTNQVVDLIEENEGLRIGNFSNLYSSGRRVCPALGLSWANCVNSRMFLSREEFGEG 247
Query: 309 RGEERICKVISSPCLAEAEARFQILAEGVSDVK 341
+ R +V+ +P L + + F I EGV V+
Sbjct: 248 SRKLRTFRVVFAPHLPQCCSEFVITGEGVFGVE 280
>Medtr2g093050.1 | DNA repair RAD51-like protein | HC |
chr2:39621140-39628196 | 20130731
Length = 436
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 120/277 (43%), Gaps = 45/277 (16%)
Query: 94 ELHVQRESII-QITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLD 152
E V+ ES+ + T + LD+ L GGI G +TEL G GKTQ C L + LP++
Sbjct: 72 EQRVRNESLAGHLPTQLKGLDEALCGGIPFGVVTELVGPPGIGKTQFCLKLSLLASLPVN 131
Query: 153 QGGGEGKAMYIDAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSR-LLLEAA 211
GG +G+ +YID E F +RL++I G + + + + R L+L
Sbjct: 132 YGGLDGRVIYIDVESKFSSKRLIEI-------GTKSFPEIFHKKGMAQEMAGRILILRPT 184
Query: 212 SM-------------MVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKL 258
S+ +++ + ++I+DS AL + ++RQ L + ++ L
Sbjct: 185 SLSEFAESLQRIKVSLLQQQVKLLIIDSMAALVLGEHDCG---ASRQQALGWHVSFIKSL 241
Query: 259 ADEFGVAIVITNQVVSQV------------------DGSAVFAGPQVKPIGGNIMAHATT 300
A+ + IV+TNQV S V D F V +G N AHA T
Sbjct: 242 AEFSRIPIVLTNQVRSHVGDESLMYSFQAQSRSTKGDIPVTFDSHLVAALGIN-WAHAVT 300
Query: 301 TRLALRKGRGEERICKVISSPCLAEAEARFQILAEGV 337
RL L G +R K+ SP F I + G+
Sbjct: 301 IRLVLESKSG-KRFIKLAKSPMSPPLAFPFHITSSGI 336
>Medtr5g091610.1 | eukaryotic translation initiation factor eIF2A |
LC | chr5:39950473-39954377 | 20130731
Length = 270
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 69/121 (57%), Gaps = 21/121 (17%)
Query: 170 RPQRLLQIADRFGLNGADVLENVA------------YARAYNTDHQSRLLLEAASMMVET 217
RP R++ IA+RFG++ VL+NV YARAY +HQ LLL A+ M E
Sbjct: 6 RPDRIVAIAERFGMDPWAVLDNVIFLFSVCECTRFIYARAYTYEHQHNLLLGLAAKMAEE 65
Query: 218 RFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAIVITNQVVSQVD 277
F ++IVDS AL++ + RQ LA+ L L K+A+EF VA+ +TNQV++
Sbjct: 66 PFRLLIVDSVIALFQEE--------MRQ-KLAQMLSRLIKIAEEFNVAVYMTNQVIADPG 116
Query: 278 G 278
G
Sbjct: 117 G 117
>Medtr4g062540.4 | DNA repair protein RAD51 | HC |
chr4:23254009-23246309 | 20130731
Length = 322
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 107/241 (44%), Gaps = 32/241 (13%)
Query: 105 ITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 164
+TG +D +L GG+ G +TEL G SGKTQ+C T + +Y+D
Sbjct: 89 FSTGCEGIDALLGGGLRVGQLTELVGPSSSGKTQVCLMSSSTV------AKNKCSVIYLD 142
Query: 165 AEGTFRPQRLL----QIADRFGLNGAD--VLEN-----VAYA-----RAYNTDHQSRLLL 208
+F PQR+ Q +D +N AD +L+N + Y + ++ HQ ++ L
Sbjct: 143 TGNSFSPQRIAYFVGQSSDYVSVNQADHRLLQNILDRIICYPVFDVYQMFDLLHQLKINL 202
Query: 209 EAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAIVI 268
+ + + + V+IVDS ++L G G M + FL L++LA E +A+++
Sbjct: 203 RSQIVKSDHQVQVLIVDSISSLITPILRGNGPQGHALMISSGFL--LKQLAHEHNIAVLV 260
Query: 269 TNQVVSQVDGSAVFAGPQVKPIGGNIMAHATTTRLAL-RKGRGEERICKVISSPCLAEAE 327
TN VV DG+ KP G RL L R R +I P +A
Sbjct: 261 TNHVVGGDDGNP-------KPALGESWKSVPHVRLLLSRDCRSNVSNISIIKHPAMASGR 313
Query: 328 A 328
+
Sbjct: 314 S 314
>Medtr4g062540.1 | DNA repair protein RAD51 | HC |
chr4:23254009-23246309 | 20130731
Length = 315
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 102/234 (43%), Gaps = 25/234 (10%)
Query: 105 ITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 164
+TG +D +L GG+ G +TEL G SGKTQ+C T + +Y+D
Sbjct: 89 FSTGCEGIDALLGGGLRVGQLTELVGPSSSGKTQVCLMSSSTV------AKNKCSVIYLD 142
Query: 165 AEGTFRPQRLL----QIADRFGLNGADVLENVAYA-----RAYNTDHQSRLLLEAASMMV 215
+F PQR+ Q +D +N + + Y + ++ HQ ++ L + +
Sbjct: 143 TGNSFSPQRIAYFVGQSSDYVSVNQNILDRIICYPVFDVYQMFDLLHQLKINLRSQIVKS 202
Query: 216 ETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAIVITNQVVSQ 275
+ + V+IVDS ++L G G M + FL L++LA E +A+++TN VV
Sbjct: 203 DHQVQVLIVDSISSLITPILRGNGPQGHALMISSGFL--LKQLAHEHNIAVLVTNHVVGG 260
Query: 276 VDGSAVFAGPQVKPIGGNIMAHATTTRLAL-RKGRGEERICKVISSPCLAEAEA 328
DG+ KP G RL L R R +I P +A +
Sbjct: 261 DDGNP-------KPALGESWKSVPHVRLLLSRDCRSNVSNISIIKHPAMASGRS 307
>Medtr4g062540.5 | DNA repair protein RAD51 | HC |
chr4:23254009-23246309 | 20130731
Length = 265
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 17/172 (9%)
Query: 105 ITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 164
+TG +D +L GG+ G +TEL G SGKTQ+C T + +Y+D
Sbjct: 89 FSTGCEGIDALLGGGLRVGQLTELVGPSSSGKTQVCLMSSSTV------AKNKCSVIYLD 142
Query: 165 AEGTFRPQRLL----QIADRFGLNGADVLENVAYA-----RAYNTDHQSRLLLEAASMMV 215
+F PQR+ Q +D +N + + Y + ++ HQ ++ L + +
Sbjct: 143 TGNSFSPQRIAYFVGQSSDYVSVNQNILDRIICYPVFDVYQMFDLLHQLKINLRSQIVKS 202
Query: 216 ETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSLQKLADEFGVAIV 267
+ + V+IVDS ++L G G M + FL L++LA E +A++
Sbjct: 203 DHQVQVLIVDSISSLITPILRGNGPQGHALMISSGFL--LKQLAHEHNIAVL 252
>Medtr4g062540.6 | DNA repair protein RAD51 | HC |
chr4:23254009-23251049 | 20130731
Length = 264
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 105 ITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 164
+TG +D +L GG+ G +TEL G SGKTQ+C T + +Y+D
Sbjct: 89 FSTGCEGIDALLGGGLRVGQLTELVGPSSSGKTQVCLMSSSTV------AKNKCSVIYLD 142
Query: 165 AEGTFRPQRLL----QIADRFGLNGAD--VLEN-----VAYA-----RAYNTDHQSRLLL 208
+F PQR+ Q +D +N AD +L+N + Y + ++ HQ ++ L
Sbjct: 143 TGNSFSPQRIAYFVGQSSDYVSVNQADHRLLQNILDRIICYPVFDVYQMFDLLHQLKINL 202
Query: 209 EAASMMVETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSL 255
+ + + + V+IVDS ++L G G + + FL L
Sbjct: 203 RSQIVKSDHQVQVLIVDSISSLITPILRGNGPQGIVHICMQNFLVYL 249
>Medtr5g042180.1 | DUF4378 domain protein | LC |
chr5:18554261-18555664 | 20130731
Length = 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 41/62 (66%)
Query: 28 IEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIVEAASKLVPM 87
I++L GI + DVKKL+DAGI + +K+L I G+SEAKVDKI EAA KLV +
Sbjct: 29 IDKLIFQGINAGDVKKLQDAGIFICNGLMMHTKKNLTGITGLSEAKVDKICEAAEKLVVI 88
Query: 88 GF 89
F
Sbjct: 89 TF 90
>Medtr4g062540.2 | DNA repair protein RAD51 | HC |
chr4:23254009-23249148 | 20130731
Length = 242
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 15/160 (9%)
Query: 105 ITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 164
+TG +D +L GG+ G +TEL G SGKTQ+C T + +Y+D
Sbjct: 89 FSTGCEGIDALLGGGLRVGQLTELVGPSSSGKTQVCLMSSSTV------AKNKCSVIYLD 142
Query: 165 AEGTFRPQRLL----QIADRFGLNGADVLENVAYA-----RAYNTDHQSRLLLEAASMMV 215
+F PQR+ Q +D +N + + Y + ++ HQ ++ L + +
Sbjct: 143 TGNSFSPQRIAYFVGQSSDYVSVNQNILDRIICYPVFDVYQMFDLLHQLKINLRSQIVKS 202
Query: 216 ETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSL 255
+ + V+IVDS ++L G G + + FL +L
Sbjct: 203 DHQVQVLIVDSISSLITPILRGNGPQGIVHICMQNFLDTL 242
>Medtr5g027350.1 | armadillo/beta-catenin-like repeat protein,
putative | LC | chr5:11361884-11370938 | 20130731
Length = 927
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 13/93 (13%)
Query: 28 IEQLQASGIASIDVKKLKDAGICTVESVAYTPRKDLLQIKGISEAKVDKIVEAASKLVPM 87
I++L + I + DVKKL DAGI T S+ +K+L +I +SE VDKI EAA K
Sbjct: 45 IDKLISQDIDADDVKKLLDAGIFTCNSLLLQAKKNLTRINDLSEETVDKIWEAAEK---- 100
Query: 88 GFTSASELHVQRESIIQITTGSRELDKILDGGI 120
H+ R+S++ I TGS+ D++L+ I
Sbjct: 101 --------HL-RKSVVGIATGSQMPDELLESNI 124
>Medtr4g062540.3 | DNA repair protein RAD51 | HC |
chr4:23254009-23251049 | 20130731
Length = 257
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 15/160 (9%)
Query: 105 ITTGSRELDKILDGGIETGSITELYGEFRSGKTQLCHTLCVTCQLPLDQGGGEGKAMYID 164
+TG +D +L GG+ G +TEL G SGKTQ+C T + +Y+D
Sbjct: 89 FSTGCEGIDALLGGGLRVGQLTELVGPSSSGKTQVCLMSSSTV------AKNKCSVIYLD 142
Query: 165 AEGTFRPQRLL----QIADRFGLNGADVLENVAYA-----RAYNTDHQSRLLLEAASMMV 215
+F PQR+ Q +D +N + + Y + ++ HQ ++ L + +
Sbjct: 143 TGNSFSPQRIAYFVGQSSDYVSVNQNILDRIICYPVFDVYQMFDLLHQLKINLRSQIVKS 202
Query: 216 ETRFAVMIVDSATALYRTDFSGRGELSARQMHLAKFLRSL 255
+ + V+IVDS ++L G G + + FL L
Sbjct: 203 DHQVQVLIVDSISSLITPILRGNGPQGIVHICMQNFLVYL 242
>Medtr8g461220.1 | DNA repair and recombination protein | HC |
chr8:21510596-21499546 | 20130731
Length = 418
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 89/209 (42%), Gaps = 30/209 (14%)
Query: 105 ITTGSRELDKILDGGIETGSITELYGEFRSGKTQLC-HTLCVTCQLPLDQGGGEGKAMYI 163
+G LD L GG+ G I E++G SGKT L H + +L G AM +
Sbjct: 101 FPSGCLALDFALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKL-------GGNAMLV 153
Query: 164 DAEGTFRPQRLLQIADRFGLNGADVLENVAYARAYNTDHQSRLLLEAASMMVETRFAVMI 223
DAE F P + G DV EN+ + DH L A M ++
Sbjct: 154 DAEHAFDPAYSKAV-------GVDV-ENLIVCQP---DHGEMALEIADRMCRSGAIDLIC 202
Query: 224 VDSATALY-RTDFSGRGELSARQMHL-----AKFLRSLQKLADEFGVAIVITNQVVSQVD 277
VDS +AL R + GE+ +QM L ++ LR + A + G ++ NQ+ ++
Sbjct: 203 VDSVSALTPRAEV--EGEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKI- 259
Query: 278 GSAVFAGPQVKPIGGNIMAHATTTRLALR 306
+ P+V GG + + RL +R
Sbjct: 260 -GVYYGNPEVTS-GGIALKFFASVRLEIR 286