Miyakogusa Predicted Gene

Lj4g3v2215330.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2215330.2 tr|G7JS37|G7JS37_MEDTR Conserved oligomeric Golgi
complex subunit OS=Medicago truncatula
GN=MTR_4g12,90.18,0,coiled-coil,NULL; Sec34,Conserved oligomeric Golgi
complex, subunit 3; SUBFAMILY NOT NAMED,NULL; CON,CUFF.50514.2
         (783 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g124570.1 | Sec34 family protein | HC | chr4:51559513-5157...  1452   0.0  
Medtr4g124570.2 | Sec34 family protein | HC | chr4:51559616-5157...  1445   0.0  
Medtr8g018610.1 | Sec34 family protein | HC | chr8:6384752-63844...    93   9e-19

>Medtr4g124570.1 | Sec34 family protein | HC |
           chr4:51559513-51571775 | 20130731
          Length = 783

 Score = 1452 bits (3759), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 706/784 (90%), Positives = 733/784 (93%), Gaps = 2/784 (0%)

Query: 1   MGSRGPPPQSHPNSAAISRGYNFAFTWEQNAPLTEHQQAAISSLSHAVSERPLPLKH-AQ 59
           MGSRGPP Q HPNS   ++ YNF  TWEQNAPL++ QQ AI SLSHAVSERP PL   AQ
Sbjct: 1   MGSRGPP-QKHPNSEVSTKSYNFTTTWEQNAPLSDQQQNAIISLSHAVSERPFPLNFLAQ 59

Query: 60  EIASVQENTLSVKTEDNCFDDSGAIQAVMVNTNQFYKWFMDLESAMKSETEEKYQHYVNT 119
           E ASVQ+N LSV  ED  FDDSGAI+ VMVNTNQFYKWF+DLESAMKSETEEKYQHYV+T
Sbjct: 60  ENASVQDNALSVTIEDTSFDDSGAIKTVMVNTNQFYKWFLDLESAMKSETEEKYQHYVST 119

Query: 120 LTERIQTCDDILQQVDDTLDLFNELQLQHQAVATKTKTLHDACDRMVQEKQRLIDFAEAL 179
           LTERIQTCDDILQQVDDTLDLFNELQLQHQAVATKTKTLHDACDR+VQEKQRLIDFAEAL
Sbjct: 120 LTERIQTCDDILQQVDDTLDLFNELQLQHQAVATKTKTLHDACDRLVQEKQRLIDFAEAL 179

Query: 180 RSKLNYFDELENVATNFYSPNMNVGNENFLPLLKRLDECISYVESNPQYAESSVYLLKFR 239
           RSKLNYFDELENVATNFYSPNMNVGNENFLPLLKRLDECISYVESNPQYAESSVYLLKFR
Sbjct: 180 RSKLNYFDELENVATNFYSPNMNVGNENFLPLLKRLDECISYVESNPQYAESSVYLLKFR 239

Query: 240 QLQSRALGMMRSHVLAVLKGASSQVQEAIRGSGDGKTSISEGVEASVIYVRFKAAASELK 299
           QLQSRALGMMRSHVLAVLKGASSQVQEAIRGSG  + SISEGVEASVIYVRFKAAASELK
Sbjct: 240 QLQSRALGMMRSHVLAVLKGASSQVQEAIRGSGGDRASISEGVEASVIYVRFKAAASELK 299

Query: 300 PLLEEIESRSSRKEYGQILAECHRLYCEQRLSLIRAIVQRRISEFSKKESLPSLTRSGCA 359
           PLLEEIESRSSRKEY QIL ECHRLYCEQRLSLIR+IVQRRISEFSKKESLPSLTRSGCA
Sbjct: 300 PLLEEIESRSSRKEYSQILVECHRLYCEQRLSLIRSIVQRRISEFSKKESLPSLTRSGCA 359

Query: 360 YLIQVCQLEHQLFDHFFPVSSKDISSLAPLMDPLSTYLYDTLRPKIVHETNIDFLCELVD 419
           YLIQVCQLEHQLFDHFFP SSKD+SSL+PLMDPLSTYLYDTLRPK+VHETNIDFLCELVD
Sbjct: 360 YLIQVCQLEHQLFDHFFPASSKDVSSLSPLMDPLSTYLYDTLRPKLVHETNIDFLCELVD 419

Query: 420 ILRMEVLGEHHSRRSESLAGLRPTFERILADVHERLTFRARTHVRDEIANYIPTNEDLDY 479
           IL+MEVLGE HSRRSESLAGLRPTFERILADVHERLTFRARTH+RDEIANY+PTNEDLDY
Sbjct: 420 ILKMEVLGEQHSRRSESLAGLRPTFERILADVHERLTFRARTHIRDEIANYMPTNEDLDY 479

Query: 480 PERLKRSADSTSEINPADDNPDISKTWYPPLEKTLACLSKLYRCLESEVFTGLAQEAVEV 539
           PE+LKR A+STSEINPAD NPD  KTWYPPLEKTL+CLSKLYRCLESEVFTGLAQEAVEV
Sbjct: 480 PEKLKRLAESTSEINPADGNPDTFKTWYPPLEKTLSCLSKLYRCLESEVFTGLAQEAVEV 539

Query: 540 CSTSIQKASKLIAKRSSQMDGQLFLIKHLLILREQIAPFNIEFSVTQKELDFSXXXXXXX 599
           CSTSIQKASKLIAKRSSQMDGQLFLIKHLL LREQIAPFNIEFSVTQKELDFS       
Sbjct: 540 CSTSIQKASKLIAKRSSQMDGQLFLIKHLLNLREQIAPFNIEFSVTQKELDFSHLLDHLR 599

Query: 600 XXXXGQASLFDWSRSTSLARTLSPRVLENQIDTKKELEKSLKATCEEFIMAVTKLVVDPL 659
               GQASLFDWSRSTSLARTLSPRVLENQIDTKKELEKSLKATCEEFIM+VTKLVVDPL
Sbjct: 600 RLLRGQASLFDWSRSTSLARTLSPRVLENQIDTKKELEKSLKATCEEFIMSVTKLVVDPL 659

Query: 660 LSFVTKVTAVKVALSSGGQNQKLESLMAKPLKDQAFASPDKVAELVQKVRTAIQEQLPVV 719
           LSFVTKVTAVKVALS+G  NQKLES MAKPLK+QAFA+PDKVAELVQKV+TAIQEQLPVV
Sbjct: 660 LSFVTKVTAVKVALSTGAPNQKLESAMAKPLKNQAFATPDKVAELVQKVQTAIQEQLPVV 719

Query: 720 IEKMKLYLQNSSTRTILFKPIKTNIVEAHTQIQSLLQSEYTSEDIQIINLKSVQDLQTEL 779
           I KMKLYLQNSSTRTILFKPIKTNI+EAH Q+QSLLQSEYTSEDIQIINLKSVQDLQTEL
Sbjct: 720 IAKMKLYLQNSSTRTILFKPIKTNIIEAHIQVQSLLQSEYTSEDIQIINLKSVQDLQTEL 779

Query: 780 DNLL 783
           DN L
Sbjct: 780 DNFL 783


>Medtr4g124570.2 | Sec34 family protein | HC |
           chr4:51559616-51571434 | 20130731
          Length = 781

 Score = 1445 bits (3740), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 705/784 (89%), Positives = 731/784 (93%), Gaps = 4/784 (0%)

Query: 1   MGSRGPPPQSHPNSAAISRGYNFAFTWEQNAPLTEHQQAAISSLSHAVSERPLPLKH-AQ 59
           MGSRGPP Q HPNS   ++ YNF  TWEQNAPL++ QQ AI SLSHAVSERP PL   AQ
Sbjct: 1   MGSRGPP-QKHPNSEVSTKSYNFTTTWEQNAPLSDQQQNAIISLSHAVSERPFPLNFLAQ 59

Query: 60  EIASVQENTLSVKTEDNCFDDSGAIQAVMVNTNQFYKWFMDLESAMKSETEEKYQHYVNT 119
           E ASVQ+N LSV  ED  FDDSGAI+ VMVNTNQFYKWF+DLESAMKSETEEKYQHYV+T
Sbjct: 60  ENASVQDNALSVTIEDTSFDDSGAIKTVMVNTNQFYKWFLDLESAMKSETEEKYQHYVST 119

Query: 120 LTERIQTCDDILQQVDDTLDLFNELQLQHQAVATKTKTLHDACDRMVQEKQRLIDFAEAL 179
           LTERIQTCDDILQQVDDTLDLFNELQLQHQAVATKTKTLHDACDR+VQEKQRLIDFAEAL
Sbjct: 120 LTERIQTCDDILQQVDDTLDLFNELQLQHQAVATKTKTLHDACDRLVQEKQRLIDFAEAL 179

Query: 180 RSKLNYFDELENVATNFYSPNMNVGNENFLPLLKRLDECISYVESNPQYAESSVYLLKFR 239
           RSKLNYFDELENVATNFYSPNMNVGNENFLPLLKRLDECISYVESNPQYAESSVYLLKFR
Sbjct: 180 RSKLNYFDELENVATNFYSPNMNVGNENFLPLLKRLDECISYVESNPQYAESSVYLLKFR 239

Query: 240 QLQSRALGMMRSHVLAVLKGASSQVQEAIRGSGDGKTSISEGVEASVIYVRFKAAASELK 299
           QLQSRALGMMRSHVLAVLKGASSQVQEAIRGSG  + SISEGVEASVIYVRFKAAASELK
Sbjct: 240 QLQSRALGMMRSHVLAVLKGASSQVQEAIRGSGGDRASISEGVEASVIYVRFKAAASELK 299

Query: 300 PLLEEIESRSSRKEYGQILAECHRLYCEQRLSLIRAIVQRRISEFSKKESLPSLTRSGCA 359
           PLLEEIESRSSRKEY QIL ECHRLYCEQRLSLIR+IVQRRISEFSKKESLPSLTRSGCA
Sbjct: 300 PLLEEIESRSSRKEYSQILVECHRLYCEQRLSLIRSIVQRRISEFSKKESLPSLTRSGCA 359

Query: 360 YLIQVCQLEHQLFDHFFPVSSKDISSLAPLMDPLSTYLYDTLRPKIVHETNIDFLCELVD 419
           YLIQVCQLEHQLFDHFFP SSKD+SSL+PLMDPLSTYLYDTLRPK+VHETNIDFLCELVD
Sbjct: 360 YLIQVCQLEHQLFDHFFPASSKDVSSLSPLMDPLSTYLYDTLRPKLVHETNIDFLCELVD 419

Query: 420 ILRMEVLGEHHSRRSESLAGLRPTFERILADVHERLTFRARTHVRDEIANYIPTNEDLDY 479
           IL+MEVLGE HSRRSESLAGLRPTFERILADVHERLTFRARTH+RDEIANY+PTNEDLDY
Sbjct: 420 ILKMEVLGEQHSRRSESLAGLRPTFERILADVHERLTFRARTHIRDEIANYMPTNEDLDY 479

Query: 480 PERLKRSADSTSEINPADDNPDISKTWYPPLEKTLACLSKLYRCLESEVFTGLAQEAVEV 539
           PE+LKR A+STSEINPAD NPD  KTWYPPLEKTL+CLSKLYRCLESEVFTGLAQEAVEV
Sbjct: 480 PEKLKRLAESTSEINPADGNPDTFKTWYPPLEKTLSCLSKLYRCLESEVFTGLAQEAVEV 539

Query: 540 CSTSIQKASKLIAKRSSQMDGQLFLIKHLLILREQIAPFNIEFSVTQKELDFSXXXXXXX 599
           CSTSIQKASKLIAKRSSQMDGQLFLIKHLL LREQIAPFNIEFSVTQKELDFS       
Sbjct: 540 CSTSIQKASKLIAKRSSQMDGQLFLIKHLLNLREQIAPFNIEFSVTQKELDFSHLLDHLR 599

Query: 600 XXXXGQASLFDWSRSTSLARTLSPRVLENQIDTKKELEKSLKATCEEFIMAVTKLVVDPL 659
               GQASLFDWSRSTSLARTLSPRVLENQIDTKKELEKSLKATCEEFIM+VTKLVVDPL
Sbjct: 600 RLLRGQASLFDWSRSTSLARTLSPRVLENQIDTKKELEKSLKATCEEFIMSVTKLVVDPL 659

Query: 660 LSFVTKVTAVKVALSSGGQNQKLESLMAKPLKDQAFASPDKVAELVQKVRTAIQEQLPVV 719
           LSFVTKVTAVKVALS+G  NQKLES MAKPLK+QAFA+PDKVAELVQK  TAIQEQLPVV
Sbjct: 660 LSFVTKVTAVKVALSTGAPNQKLESAMAKPLKNQAFATPDKVAELVQK--TAIQEQLPVV 717

Query: 720 IEKMKLYLQNSSTRTILFKPIKTNIVEAHTQIQSLLQSEYTSEDIQIINLKSVQDLQTEL 779
           I KMKLYLQNSSTRTILFKPIKTNI+EAH Q+QSLLQSEYTSEDIQIINLKSVQDLQTEL
Sbjct: 718 IAKMKLYLQNSSTRTILFKPIKTNIIEAHIQVQSLLQSEYTSEDIQIINLKSVQDLQTEL 777

Query: 780 DNLL 783
           DN L
Sbjct: 778 DNFL 781


>Medtr8g018610.1 | Sec34 family protein | HC | chr8:6384752-6384450
           | 20130731
          Length = 72

 Score = 93.2 bits (230), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 44/51 (86%), Positives = 45/51 (88%)

Query: 192 VATNFYSPNMNVGNENFLPLLKRLDECISYVESNPQYAESSVYLLKFRQLQ 242
           VATNFYS NMNVG  NFLPLLKRLDECISYVESNP Y ES+VYLLKF QLQ
Sbjct: 13  VATNFYSSNMNVGIVNFLPLLKRLDECISYVESNPMYVESTVYLLKFHQLQ 63