Miyakogusa Predicted Gene

Lj4g3v2215110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2215110.1 Non Characterized Hit- tr|G7L8E2|G7L8E2_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,51.59,4e-19,seg,NULL; Auxin_inducible,Auxin responsive SAUR
protein,CUFF.50488.1
         (124 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g124700.1 | SAUR-like auxin-responsive family protein | HC...   166   4e-42
Medtr2g044020.1 | SAUR-like auxin-responsive family protein | HC...   133   3e-32
Medtr8g022440.1 | SAUR-like auxin-responsive family protein | HC...    93   4e-20
Medtr8g022380.1 | SAUR-like auxin-responsive family protein | HC...    93   7e-20

>Medtr4g124700.1 | SAUR-like auxin-responsive family protein | HC |
           chr4:51686960-51688164 | 20130731
          Length = 122

 Score =  166 bits (420), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 89/128 (69%), Positives = 98/128 (76%), Gaps = 10/128 (7%)

Query: 1   MARGGKLTKLKSALKKWNSFSSNGSATKHXXXXXXXXXXXXXX--LQTVYVGKSRRLYRV 58
           MA+GGKL KLKSALKKWNSF  NG  ++H                L TV+VGKSRRLYRV
Sbjct: 1   MAKGGKLMKLKSALKKWNSFG-NGKQSRHSISAVADEDSSSSRSDLHTVFVGKSRRLYRV 59

Query: 59  SSDVVDHPVFRELVERSRES-QQNDSDSDAAVNV-ACEVVLFEHLLWMLENADPQPDSLD 116
           +SDVVD+PVFRELVERSRE+ QQND+     VNV ACEVVLFEHLLWMLENADPQP+SLD
Sbjct: 60  TSDVVDNPVFRELVERSRETEQQNDT-----VNVVACEVVLFEHLLWMLENADPQPESLD 114

Query: 117 ELADFYAC 124
           EL DFYAC
Sbjct: 115 ELVDFYAC 122


>Medtr2g044020.1 | SAUR-like auxin-responsive family protein | HC |
           chr2:19137570-19136731 | 20130731
          Length = 126

 Score =  133 bits (335), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 69/127 (54%), Positives = 89/127 (70%), Gaps = 4/127 (3%)

Query: 1   MARGGKLTKLKSALKKWNSFSSNGSATKHXXXXXXXXX---XXXXXLQTVYVGKSRRLYR 57
           MA+  KL KLKS LKKWN+F+   +  KH                 L+ V+VGK+RR Y 
Sbjct: 1   MAKVAKLAKLKSVLKKWNTFTYYNNNNKHNRSSIRAVVNDDESTQDLRPVFVGKTRRRYL 60

Query: 58  VSSDVVDHPVFRELVERSRESQQNDSDSDAAVNVACEVVLFEHLLWMLENADPQPDSLDE 117
           V+S+VV HP+F+ELV+RSR+S + + D D  VNVACEVVLFEH+LWM+EN DPQP+SLDE
Sbjct: 61  VNSEVVGHPLFKELVDRSRDSTEVN-DEDDTVNVACEVVLFEHMLWMIENTDPQPESLDE 119

Query: 118 LADFYAC 124
           L D+Y+C
Sbjct: 120 LVDYYSC 126


>Medtr8g022440.1 | SAUR-like auxin-responsive family protein | HC |
           chr8:7953091-7952385 | 20130731
          Length = 121

 Score = 93.2 bits (230), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/126 (49%), Positives = 75/126 (59%), Gaps = 10/126 (7%)

Query: 1   MARGGKLTKLKSALKKWNSFSSNGSATKHXXXXXXXXXXXXXXLQTVYVGKSRRLYRVSS 60
           MA+ GKLTKLKSA+K+W S +                      L  VYVGKSRR Y V+S
Sbjct: 1   MAKLGKLTKLKSAIKRWPSLTKLSRNNS-SVSSSTKQHEHEQELHAVYVGKSRRQYLVNS 59

Query: 61  DVVDHPVFRELVERSRESQQNDSDSDAAVNVACEVVLFEHLLWMLEN--ADPQPDSLDEL 118
           DV+ HPVF+ELV+RS       S  D  V V+CEVVLFEHLLWMLE+   + Q  S+ EL
Sbjct: 60  DVIQHPVFQELVDRS-------SCDDGVVVVSCEVVLFEHLLWMLESVEGETQLGSMAEL 112

Query: 119 ADFYAC 124
            +FY C
Sbjct: 113 VEFYNC 118


>Medtr8g022380.1 | SAUR-like auxin-responsive family protein | HC |
           chr8:7937243-7936476 | 20130731
          Length = 119

 Score = 92.8 bits (229), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/126 (49%), Positives = 78/126 (61%), Gaps = 12/126 (9%)

Query: 1   MARGGKLTKLKSALKKWNSFSSNGSATKHXXXXXXXXXXXXXXLQTVYVGKSRRLYRVSS 60
           MA+ GKLTKLKSA+K+W S +     +++              L  VYVGKSRR Y V+S
Sbjct: 1   MAKLGKLTKLKSAIKRWPSLTK---LSRNNSSISSSSKQQEQELHAVYVGKSRRQYLVNS 57

Query: 61  DVVDHPVFRELVERSRESQQNDSDSDAAVNVACEVVLFEHLLWMLEN--ADPQPDSLDEL 118
           +VV HPVF+ELV+RS       S  D  V V+CEVVLFEHLLWMLE+   + Q  S+ EL
Sbjct: 58  NVVQHPVFQELVDRS-------SCDDGVVVVSCEVVLFEHLLWMLESVEGETQLGSMAEL 110

Query: 119 ADFYAC 124
            +FY C
Sbjct: 111 VEFYNC 116