Miyakogusa Predicted Gene

Lj4g3v2192520.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2192520.1 Non Characterized Hit- tr|A5BGQ4|A5BGQ4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,78.57,5e-18,seg,NULL,CUFF.50450.1
         (118 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g125370.1 | membrane lipoprotein, putative | HC | chr4:519...   163   3e-41

>Medtr4g125370.1 | membrane lipoprotein, putative | HC |
           chr4:51981895-51982910 | 20130731
          Length = 208

 Score =  163 bits (413), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 80/118 (67%), Positives = 87/118 (73%)

Query: 1   MLALFTKEKASLTLLKSPRDPKEAKLLVRVECGALMAMCMLQMVVLVLSCAVHSCLVKDY 60
           + ALFTKE ASL +LKS RDPKEAKLLVR+ECG LM MCMLQ VVLVLSC VHSC+VKDY
Sbjct: 91  IFALFTKENASLKMLKSSRDPKEAKLLVRLECGVLMGMCMLQFVVLVLSCVVHSCVVKDY 150

Query: 61  EGLXXXXXXXXXXXXXXXXXXQEESMANASKIAEVKDKEFDEKMNSKYGKWVKTDFEP 118
           E L                  QEES AN +KI E+KDKEFDEKM SKYG+WVKTDFEP
Sbjct: 151 EELEAEKEAIARKRSRRISKVQEESTANVAKIDEIKDKEFDEKMKSKYGQWVKTDFEP 208