Miyakogusa Predicted Gene

Lj4g3v2179330.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2179330.1 Non Characterized Hit- tr|D8SY77|D8SY77_SELML
Putative uncharacterized protein OS=Selaginella
moelle,27.8,0.00000000009,Stress responsive A/B Barrel Domain,Stress
responsive alpha-beta barrel; seg,NULL; Dimeric alpha+bet,CUFF.50483.1
         (257 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g125530.1 | stress responsive A/B barrel domain protein | ...   320   7e-88
Medtr0121s0060.1 | stress responsive A/B barrel domain protein |...   188   5e-48
Medtr4g125560.1 | stress responsive A/B barrel domain protein | ...   169   2e-42

>Medtr4g125530.1 | stress responsive A/B barrel domain protein | HC
           | chr4:52076843-52075750 | 20130731
          Length = 267

 Score =  320 bits (821), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 164/248 (66%), Positives = 200/248 (80%), Gaps = 9/248 (3%)

Query: 1   MQCLR--LKPPLSFPVTFSPSKHLRRNHLPAWSSTRSPIKSMSTT------VEHIVLFKV 52
           M CLR  L   L  P + S SKHL  + L   S + S IK+MSTT      +EHIVLFKV
Sbjct: 1   MLCLRTQLSFSLRIPSSSSSSKHLTPHLLSFPSRSSSSIKTMSTTHSKSQTIEHIVLFKV 60

Query: 53  KDDTDPSKVTAMVNGLSSLISLDHVLHLTVGPILRNRSTSLTFTHMLHSRYNSKEDLDAY 112
           K DT+PSK+T+M+N LSSL+SLD VLHLTVGP+LRNRSTSLTFTHMLH+RY+SK+DL+AY
Sbjct: 61  KQDTEPSKITSMINNLSSLVSLDQVLHLTVGPLLRNRSTSLTFTHMLHTRYSSKQDLEAY 120

Query: 113 SAHPSHLGVVRGNVLPIIDDLMAVDWVAEDLRG-DIVTPQGSAMRLTLLKLKENADSGKV 171
           SAHPSH+ VV+GNVLPIIDD+MAVDW+AEDL G D+V  +GSAMR+  LKLKEN  + KV
Sbjct: 121 SAHPSHVSVVKGNVLPIIDDIMAVDWIAEDLNGEDLVPKEGSAMRVMFLKLKENVVNDKV 180

Query: 172 LGVIREIPESFKQISQLSCGENFSPARAKGFSVASLAVFPGQGELEDVDSNGEVVSYHKD 231
           L VI+EIPE+F+QI Q+S GENFSPARAKG+S+ASLAVFPG+ E+E+ DSN E++ + KD
Sbjct: 181 LQVIKEIPENFQQIKQISYGENFSPARAKGYSIASLAVFPGEKEMEEHDSNHELMKFQKD 240

Query: 232 KVRDLLES 239
           KVRD +ES
Sbjct: 241 KVRDQIES 248


>Medtr0121s0060.1 | stress responsive A/B barrel domain protein | HC
           | scaffold0121:28502-27484 | 20130731
          Length = 265

 Score =  188 bits (477), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 116/260 (44%), Positives = 161/260 (61%), Gaps = 35/260 (13%)

Query: 4   LRLKPPLSFPVTFSPSKHLRR-------NHLPAWSSTRSPIKSMSTT--VEHIVLFKVKD 54
           LR   PLS  +TFSP K  ++        H    S ++S IK  ST+  VEHIVLFKVK+
Sbjct: 5   LRTCSPLS--LTFSPFKQAKKLSTSFKPYHQSPPSRSQSSIKMSSTSQGVEHIVLFKVKE 62

Query: 55  DTDPSKVTAMVNGLSSLISLDHVLHLTVGPILRNRS--------TSLTFTHMLHSRYNSK 106
           +T+ SKV  M+N L +L++++ V HLT GPIL N          + L +TH+LHSRY+SK
Sbjct: 63  NTESSKVNTMINELQNLVTIEQVRHLTFGPILNNNEHTTSTIPFSDLRYTHLLHSRYDSK 122

Query: 107 EDLDAYSAHPSHLGVVRGNVLPIIDDLMAVDWVAEDLRGDIVTP----QGSAMRLTLLKL 162
           EDL  Y+AHP+HL  VR   LPI+DDL+ +DW+A    G++  P     G+A R++ LKL
Sbjct: 123 EDLQIYNAHPTHLNGVRNFALPILDDLLVIDWIA----GEVALPPHPSPGTAFRVSFLKL 178

Query: 163 KENADS---GKVLGVIREIPESFKQISQLSCGENFSPARAKGFSVASLAVFPGQGELEDV 219
           K+  +     +V   I+ I ES   +S +S GEN SP RAKGF++ASL VFPG+ EL+ V
Sbjct: 179 KDEKNGEVKEEVFRAIQGIKESVGGVSYVSYGENISPERAKGFTIASLVVFPGREELDRV 238

Query: 220 DSNGEVVSYHKDKVRDLLES 239
           D +  ++     KV++ LES
Sbjct: 239 DPSEGLI-----KVKEHLES 253


>Medtr4g125560.1 | stress responsive A/B barrel domain protein | LC
           | chr4:52087747-52087097 | 20130731
          Length = 216

 Score =  169 bits (429), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/210 (45%), Positives = 137/210 (65%), Gaps = 19/210 (9%)

Query: 40  MSTTVEHIVLFKVKDDTDPSKVTAMVNGLSSLISLDHVLHLTVGPILRNRSTSLTF---- 95
           M + +EH+VLF++K+D   S + +MV  ++SLISL+  LHLT+GP++  +S++       
Sbjct: 2   MLSIIEHVVLFRIKEDVPQSAIDSMVKQVNSLISLEEPLHLTMGPLVSIQSSNSISSFNF 61

Query: 96  THMLHSRYNSKEDLDAYSAHPSHLGVVRGNVLPIIDDLMAVDWVAEDLRGDIVTPQGSAM 155
           THM+HSR+ SKEDL AY+ HP+HL V++ N  PI+D+ MA++WV E    D+V   GSAM
Sbjct: 62  THMIHSRFRSKEDLHAYAVHPTHLAVIKDNK-PIVDETMALNWVTEVHDNDLVLQHGSAM 120

Query: 156 RLTLLKLKENADSGKVLGVIREIP-ESFKQIS----QLSCGENFSPARAKGFSVASLAVF 210
           ++   KLKE        G+  E+  E  K IS    Q +CGENFSP RAKGFS+ SL+VF
Sbjct: 121 QVVFFKLKE--------GLGEEVKDEVLKGISGIQHQFNCGENFSPGRAKGFSIGSLSVF 172

Query: 211 PGQGELEDVDSNGEVVSYH-KDKVRDLLES 239
           P   EL +VDS+ E   Y   DKV++ L++
Sbjct: 173 PSLRELHEVDSHEEFRKYDTNDKVKENLDT 202