Miyakogusa Predicted Gene
- Lj4g3v2179300.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2179300.1 tr|Q6WG36|Q6WG36_PEA RPA 70kDa subunit OS=Pisum
sativum PE=2 SV=1,78.08,0,rpa1: replication factor-a protein 1
(rpa1),Replication factor-a protein 1 Rpa1; REPLICATION FACTOR
,CUFF.50468.1
(624 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g041270.1 | replication protein A 70 kDa protein | HC | ch... 997 0.0
Medtr3g047950.1 | replication factor A1 | HC | chr3:15999174-160... 751 0.0
Medtr4g109580.1 | replication protein A 70 kDa protein | HC | ch... 283 4e-76
Medtr4g109580.2 | replication protein A 70 kDa protein | HC | ch... 261 1e-69
Medtr4g109590.1 | replication factor-A carboxy-terminal domain p... 94 4e-19
Medtr8g062030.1 | replication factor-A carboxy-terminal domain p... 87 7e-17
Medtr5g027390.1 | replication factor-A-like protein | LC | chr5:... 80 6e-15
Medtr4g070090.1 | replication factor-A-like protein | HC | chr4:... 78 3e-14
Medtr5g078250.1 | replication factor-A carboxy-terminal domain p... 75 2e-13
Medtr2g048560.1 | replication factor-A carboxy-terminal domain p... 72 1e-12
Medtr5g026880.1 | replication factor-A protein 1, amine-terminal... 67 4e-11
Medtr4g036240.1 | replication factor-A carboxy-terminal domain p... 67 5e-11
Medtr1g105785.1 | replication factor-A carboxy-terminal domain p... 67 6e-11
Medtr8g479260.1 | replication factor-A carboxy-terminal domain p... 66 1e-10
Medtr1g075850.1 | replication factor-A carboxy-terminal domain p... 66 1e-10
Medtr6g039240.1 | animal RPA1 domain protein | LC | chr6:1418076... 65 1e-10
Medtr2g008650.1 | replication factor-A carboxy-terminal domain p... 65 3e-10
Medtr6g052340.1 | DNA primase | LC | chr6:18273765-18278897 | 20... 64 6e-10
Medtr8g463820.1 | animal RPA1 domain protein | LC | chr8:2251463... 62 2e-09
Medtr1g094230.1 | animal RPA1 domain protein | LC | chr1:4243647... 61 3e-09
Medtr6g445520.1 | replication factor-A carboxy-terminal domain p... 59 1e-08
Medtr8g088810.1 | DUF223 domain protein | LC | chr8:36895897-368... 59 2e-08
Medtr1g052715.1 | DUF223 domain protein | LC | chr1:21677037-216... 54 3e-07
Medtr8g036090.1 | animal RPA1 domain protein | HC | chr8:1327908... 52 2e-06
Medtr4g471610.1 | animal RPA1 domain protein | HC | chr4:2707183... 52 2e-06
Medtr3g078440.1 | animal RPA1 domain protein | HC | chr3:3535014... 52 2e-06
Medtr3g056270.1 | replication factor-A carboxy-terminal domain p... 52 3e-06
Medtr3g116750.1 | animal RPA1 domain protein | HC | chr3:5461096... 50 5e-06
Medtr3g095950.1 | animal RPA1 domain protein | HC | chr3:4384560... 50 6e-06
Medtr8g096680.1 | animal RPA1 domain protein | HC | chr8:4055821... 50 8e-06
Medtr1g036740.1 | animal RPA1 domain protein | HC | chr1:1349734... 50 8e-06
>Medtr2g041270.1 | replication protein A 70 kDa protein | HC |
chr2:18105202-18100698 | 20130731
Length = 627
Score = 997 bits (2577), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/626 (76%), Positives = 550/626 (87%), Gaps = 4/626 (0%)
Query: 1 MAVNLTANAIPAIVSGDLNLKPLLQVLDIKLISNSK--QQERYRILLSDAVSSQQAMLAT 58
MAVNLTANAI AI++GD++ KPLLQVLDI I ++K QQ+RYR+LLSDAVSS AMLA
Sbjct: 1 MAVNLTANAITAIIAGDVDAKPLLQVLDIATIVSTKNSQQQRYRLLLSDAVSSHHAMLAA 60
Query: 59 QLNDQLRAGLVKRGSIVQLIEYICSPIQNRKIIVVLNMETIISDYEIIGNPKLFVETDFP 118
QLND++ G VK+GSIVQL++YIC+P+QNRKII+VLNMETII D EIIGNPK FV+++ P
Sbjct: 61 QLNDRVNTGRVKQGSIVQLLDYICTPLQNRKIIMVLNMETIIPDCEIIGNPKSFVDSELP 120
Query: 119 NQEALPNNKMQNPSRSNSYHLPAQNASCNMQNXXXXXXXXXXXXXXXXGHGAIVRNEAPA 178
Q+ALP+N + SRS + +L AQNA N QN G GA+++NEAPA
Sbjct: 121 VQKALPDNTVAGSSRSIN-NLAAQNAGSNGQNFRPTVQPPYQPPPLYKGRGAVMKNEAPA 179
Query: 179 RVIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDADGGEIRVTCFNTA 238
RVIPIAALNPYQGRWAIKARVTAKGDLRRYNNA+GDGKVFSFDLLD+DGGEIRVTCFN
Sbjct: 180 RVIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRVTCFNAV 239
Query: 239 VDRFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQF 298
VDRFY+ IEVG+VYLIS+G+LKPAQKNFNHLKNEWEI+LDL+S +ELCPDEDGSIP+QQF
Sbjct: 240 VDRFYEAIEVGKVYLISKGSLKPAQKNFNHLKNEWEIMLDLNSTIELCPDEDGSIPRQQF 299
Query: 299 SFRSISDIENADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSGRSVELTLW 358
SFR ISDIE ++N+ILDVIGVV SV PSVPILRKNGMET RR+LNLKD SG+SVELTLW
Sbjct: 300 SFRPISDIEIVENNAILDVIGVVTSVNPSVPILRKNGMETLRRVLNLKDNSGKSVELTLW 359
Query: 359 GEFCNREGQMLQEMMDAGFFPTLAVKAGKVNDFSGKSIGTISSTQLFINPDFSEAHSLRE 418
GEFCNREGQ LQEM+DAG FP LAVKAGKVN+FSGKSIG+IS+TQLFINPDF EA +LR
Sbjct: 360 GEFCNREGQKLQEMVDAGVFPVLAVKAGKVNEFSGKSIGSISTTQLFINPDFPEAQTLRN 419
Query: 419 WYDRVGKDSASLSISKDIIPGGPKNDVRKTVSQIKDEGLGRSEKPDWMTLRATISFIKTD 478
W+D+VGKDSASLSISKDI GGPKN++RKTVSQIKDEGLGRS KPDW+T+RAT+SF++TD
Sbjct: 420 WFDQVGKDSASLSISKDITHGGPKNEIRKTVSQIKDEGLGRSGKPDWITMRATVSFMRTD 479
Query: 479 TFCYTACPLMIGDRQCNKKVTRSGN-RWQCDRCNQEFDECDYRYLLQAQILDHTGITWVT 537
FCYTACPLMIGDR CNKKVT+SG+ +WQCDRCNQEF+ECDYRYLLQAQI DH+G+TWVT
Sbjct: 480 PFCYTACPLMIGDRPCNKKVTKSGDTKWQCDRCNQEFEECDYRYLLQAQIQDHSGLTWVT 539
Query: 538 AFQETGEEIMGYPAKELYMLKYEQQDDEKFAGIIKSRLFNQFVFRLKIKEELYGDEQRVK 597
AFQE GEEIMGYPAK+LY+LKYEQ+DDEKF IIKSRLFN+FVFRLKIKEELY +EQ+VK
Sbjct: 540 AFQEAGEEIMGYPAKDLYVLKYEQEDDEKFGDIIKSRLFNEFVFRLKIKEELYNEEQKVK 599
Query: 598 VTVMKAGEVSYSSESGYMLDLISKFK 623
+TV+KA +V+YS+ES YMLD ISKF+
Sbjct: 600 ITVVKADKVNYSAESRYMLDFISKFR 625
>Medtr3g047950.1 | replication factor A1 | HC |
chr3:15999174-16004293 | 20130731
Length = 824
Score = 751 bits (1940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/639 (59%), Positives = 467/639 (73%), Gaps = 70/639 (10%)
Query: 1 MAVNLTANAIPAIVSGDLNLKPLLQVLDIKLISNSKQQ--ERYRILLSDAVSSQQAMLAT 58
M++ LT NAIPAI SGD++ KPL+QV+ I L+ +S +Y + LSD V S A +A
Sbjct: 1 MSIKLTENAIPAITSGDVDAKPLVQVISITLLVDSDDSLLRKYYLKLSDGVYSHSATIAA 60
Query: 59 QLNDQLRAGLVKRGSIVQLIEYICSPIQNRKIIVVLNMETIISDYEIIGNPKLFVETDFP 118
QLND + G VK GSIV+L++Y+C I RKII+V METI+ D +IIGNPK FV+ + P
Sbjct: 61 QLNDGVGTGRVKEGSIVKLLDYVCPTIVIRKIIIVHKMETIVLDSQIIGNPKSFVDPELP 120
Query: 119 NQEALPNNKMQNPSRSNSYHLPAQNASCNMQNXXXXXXXXXXXXXXXXGHGAIVRNEAPA 178
+V NE P
Sbjct: 121 ----------------------------------------------------MVENEEP- 127
Query: 179 RVIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDADGGEIRVTCFNTA 238
IPIAAL+PY+G+WAIKARVT+KG LR YN+ +G K FSFD+LD+DGGE++VTC N
Sbjct: 128 --IPIAALHPYKGKWAIKARVTSKGHLRHYNSPEGYLKAFSFDVLDSDGGEVQVTCLNDV 185
Query: 239 VDRFYDVIEVGRVYLISRGNLKP-AQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQ 297
+D FY+VIEVG+VYLIS+ L P K+ HLK +WEI+L+ +S VELCPDEDGSIP +
Sbjct: 186 IDSFYEVIEVGKVYLISKAGLIPVGSKDLKHLKIDWEIMLNSNSTVELCPDEDGSIPMHK 245
Query: 298 FSFRSISDIENADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSGRSVELTL 357
FSFRSISDIEN +SN+ILDVIGVV SV SV + R+N +E ++RILNLKD SGRSVELTL
Sbjct: 246 FSFRSISDIENIESNTILDVIGVVTSVNSSVLMSRENALEMRKRILNLKDNSGRSVELTL 305
Query: 358 WGEFCNREGQMLQEMMDAGFFPTLAVKAGKVNDFSGKSIGTISSTQLFINPDFSEAHSLR 417
WGE CNREGQ L++++DAG FP LAVKAGKV +F GKSI I ++LF+NPDF EA SLR
Sbjct: 306 WGELCNREGQELKDIVDAGGFPVLAVKAGKVIEFRGKSINAIPISRLFVNPDFPEAQSLR 365
Query: 418 EWYDRVGKDSASLSISKDIIPGGPKNDVRKTVSQIKDEGLGRSEKPDWMTLRATISFIKT 477
W+D+ GKDSAS SISKDI GGPKN++RKTVSQIKDEGLG ++KPDW+T RATISF+KT
Sbjct: 366 LWFDQDGKDSASSSISKDISYGGPKNELRKTVSQIKDEGLGCTDKPDWITTRATISFMKT 425
Query: 478 DTFCYTACPLMIGDRQCNKKVTRSG------------NRWQCDRCNQEFDECDYRYLLQA 525
D FCYTACP+MIGDR+CNKKVTRSG RW+CD CNQEFD C+YRY+LQA
Sbjct: 426 DVFCYTACPVMIGDRRCNKKVTRSGERCSKKVTKTVNTRWKCDTCNQEFDVCEYRYILQA 485
Query: 526 QILDHTGITWVTAFQETGEEIMGYPAKELYMLKYEQQDDEKFAGIIKSRLFNQFVFRLKI 585
QI+DHTG+T VTAF E GE+IMGY AK+LY+LKYEQ+DDE+F IIKS LFNQFVFRLKI
Sbjct: 486 QIVDHTGLTCVTAFNEAGEDIMGYSAKDLYVLKYEQEDDERFRDIIKSILFNQFVFRLKI 545
Query: 586 KEELYGDEQRVKVTVMKAGEVSYSSESGYMLDLISKFKV 624
++EL G+EQ+VK+ V+KA +V+YS+ES YMLDLISKF++
Sbjct: 546 QKELCGEEQKVKIIVVKADKVNYSAESKYMLDLISKFEI 584
>Medtr4g109580.1 | replication protein A 70 kDa protein | HC |
chr4:45544168-45547694 | 20130731
Length = 618
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 192/625 (30%), Positives = 322/625 (51%), Gaps = 64/625 (10%)
Query: 23 LLQVLDIKLISNSKQQERYRILLSDAVSSQQAMLATQLNDQLRAGLVKRGSIVQLIEYIC 82
++QVLD+K N RY SD + ++ + ++ +G ++ ++++++Y
Sbjct: 29 VVQVLDLKSSGN-----RYSFSASDGKKKLKGIIPSNQYSEVLSGKIQNLGLIRILDYTL 83
Query: 83 SPIQNR--KIIVVLNMETIISDYE---------IIGNPKLFVETDFPNQEALPNNKMQNP 131
+ I N+ K ++++ E + E I PK E D +E + P
Sbjct: 84 NVIPNKSEKYLMLIKCEPVSPALETEIKSEQSGITLKPK---EDDVVKREGSTAGIVLKP 140
Query: 132 -----SRSNSYHLPAQNASCNMQNXXXXXXXXXXXXXXXXGHGAIVRNEAPARVIPIAAL 186
S+S + L Q+A + A R RV P+ +L
Sbjct: 141 KLDMVSKSAAQILHEQHA-----------------------NSAPARLAMTRRVRPLVSL 177
Query: 187 NPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDADGGEIRVTCFNTAVDRFYDVI 246
NPY G W IK VT+KG +R Y NA+G+G VF+ +L D DG +I+ T FN A +FYD
Sbjct: 178 NPYMGGWTIKVSVTSKGTMRTYKNARGEGCVFNVELTDEDGTQIQATMFNDAARKFYDKF 237
Query: 247 EVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSFRSISDI 306
+G+VY IS+G+LK A KNF + N++E+ L+ +S VE +E +P+ +F+F I +
Sbjct: 238 AMGKVYYISKGSLKVANKNFKTVVNDYEMTLNENSEVEEVANEAAFVPETKFNFVPIDQL 297
Query: 307 -ENADSNSILDVIGVVISVKPSVPILRKNGMET-QRRILNLKDCSGRSVELTLWGEFCNR 364
+ + ++D++GVV +V ++ I RK+ ET +R + + D + ++V ++LWG+
Sbjct: 298 GPYVNKSELVDLVGVVKNVSSTMSIRRKSNNETVPKRDITIADETKKTVVVSLWGDLATN 357
Query: 365 EGQMLQEMMDAGFFPTLAVKAGKVNDFSGKSIGTISSTQLFINPDFSEAHSLREWYDRVG 424
GQ L +M D P +A+K+ KV DF G S+ IS + + +NP+ EA LR WYD G
Sbjct: 358 IGQELLDMADKS--PVVAIKSLKVGDFQGISLSAISRSLVLVNPEVPEAQKLRCWYDSEG 415
Query: 425 KDSASLSISKDIIPGGPKNDV-----RKTVSQIKDEGLGRSEKPDWMTLRATISFIKTD- 478
KD+A +IS I R +S I +EKP + ++R ISFIK D
Sbjct: 416 KDAAMAAISSGSISSSNSGSRSVYSDRVPLSYITSNLSLGAEKPAFFSIRGNISFIKADQ 475
Query: 479 TFCYTACPLMIGDRQCNKKVTRSGNR-WQCDRCNQEFDECDYRYLLQAQILDHTGITWVT 537
Y AC + CNKKVT + + C+ C + EC++RY++ A++ D +G +V+
Sbjct: 476 AMWYRAC------KTCNKKVTEDMDAGYWCESCQKNDAECNFRYIMVAKVSDASGEAFVS 529
Query: 538 AFQETGEEIMGYPAKELYMLKYEQQDDEKFAGIIKSRLFNQFVFRLKIKEELYGDEQRVK 597
F E E+I+G PA+EL LK + ++ + +K + + R+ + + Y E+R +
Sbjct: 530 TFNEEAEKIIGCPAEELDNLKSQDGEENPYDMKLKKATWIPHLLRVSVSQNEYNGEKRQR 589
Query: 598 VTVMKAGEVSYSSESGYMLDLISKF 622
+T + +++ES ++L+ ISK
Sbjct: 590 ITARAVVPIDFAAESKFLLEDISKM 614
>Medtr4g109580.2 | replication protein A 70 kDa protein | HC |
chr4:45544168-45547694 | 20130731
Length = 560
Score = 261 bits (668), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 180/561 (32%), Positives = 290/561 (51%), Gaps = 64/561 (11%)
Query: 23 LLQVLDIKLISNSKQQERYRILLSDAVSSQQAMLATQLNDQLRAGLVKRGSIVQLIEYIC 82
++QVLD+K N RY SD + ++ + ++ +G ++ ++++++Y
Sbjct: 29 VVQVLDLKSSGN-----RYSFSASDGKKKLKGIIPSNQYSEVLSGKIQNLGLIRILDYTL 83
Query: 83 SPIQNR--KIIVVLNMETIISDYE---------IIGNPKLFVETDFPNQEALPNNKMQNP 131
+ I N+ K ++++ E + E I PK E D +E + P
Sbjct: 84 NVIPNKSEKYLMLIKCEPVSPALETEIKSEQSGITLKPK---EDDVVKREGSTAGIVLKP 140
Query: 132 -----SRSNSYHLPAQNASCNMQNXXXXXXXXXXXXXXXXGHGAIVRNEAPARVIPIAAL 186
S+S + L Q+A + A R RV P+ +L
Sbjct: 141 KLDMVSKSAAQILHEQHA-----------------------NSAPARLAMTRRVRPLVSL 177
Query: 187 NPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDADGGEIRVTCFNTAVDRFYDVI 246
NPY G W IK VT+KG +R Y NA+G+G VF+ +L D DG +I+ T FN A +FYD
Sbjct: 178 NPYMGGWTIKVSVTSKGTMRTYKNARGEGCVFNVELTDEDGTQIQATMFNDAARKFYDKF 237
Query: 247 EVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSFRSISDI 306
+G+VY IS+G+LK A KNF + N++E+ L+ +S VE +E +P+ +F+F I +
Sbjct: 238 AMGKVYYISKGSLKVANKNFKTVVNDYEMTLNENSEVEEVANEAAFVPETKFNFVPIDQL 297
Query: 307 -ENADSNSILDVIGVVISVKPSVPILRKNGMET-QRRILNLKDCSGRSVELTLWGEFCNR 364
+ + ++D++GVV +V ++ I RK+ ET +R + + D + ++V ++LWG+
Sbjct: 298 GPYVNKSELVDLVGVVKNVSSTMSIRRKSNNETVPKRDITIADETKKTVVVSLWGDLATN 357
Query: 365 EGQMLQEMMDAGFFPTLAVKAGKVNDFSGKSIGTISSTQLFINPDFSEAHSLREWYDRVG 424
GQ L +M D P +A+K+ KV DF G S+ IS + + +NP+ EA LR WYD G
Sbjct: 358 IGQELLDMADKS--PVVAIKSLKVGDFQGISLSAISRSLVLVNPEVPEAQKLRCWYDSEG 415
Query: 425 KDSASLSISKDIIPGGPKNDV-----RKTVSQIKDEGLGRSEKPDWMTLRATISFIKTD- 478
KD+A +IS I R +S I +EKP + ++R ISFIK D
Sbjct: 416 KDAAMAAISSGSISSSNSGSRSVYSDRVPLSYITSNLSLGAEKPAFFSIRGNISFIKADQ 475
Query: 479 TFCYTACPLMIGDRQCNKKVTRSGNR-WQCDRCNQEFDECDYRYLLQAQILDHTGITWVT 537
Y AC + CNKKVT + + C+ C + EC++RY++ A++ D +G +V+
Sbjct: 476 AMWYRAC------KTCNKKVTEDMDAGYWCESCQKNDAECNFRYIMVAKVSDASGEAFVS 529
Query: 538 AFQETGEEIMGYPAKELYMLK 558
F E E+I+G PA+EL LK
Sbjct: 530 TFNEEAEKIIGCPAEELDNLK 550
>Medtr4g109590.1 | replication factor-A carboxy-terminal domain
protein | HC | chr4:45550465-45552007 | 20130731
Length = 267
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 128/282 (45%), Gaps = 42/282 (14%)
Query: 348 CSGR-SVELTLWGEFCNREGQMLQEMMDAGFFPTLAVKAGKVNDFSGKSIGTISSTQLFI 406
C G+ +V +TLWG+ G L E+ D P +A+K+ KV DF G S+ + + + I
Sbjct: 14 CRGKKTVVVTLWGDLATNIGNELLEIADKS--PVVAIKSVKVWDFGGVSLSAMHRSLVMI 71
Query: 407 NPDFSEAHSLREW---------YDRVGKDSASLSISKDIIPGGPKNDVRKTVSQIKDEGL 457
NPD EA LR YD GKD+A +++ IP + S I+
Sbjct: 72 NPDVPEARKLRSSEAGIPLSPRYDSEGKDAAMVALRSGSIPS--------SNSGIRSFLF 123
Query: 458 GRSEKPDWMTLRATISFIKTDT-FCYTACPLMIGDRQCNKKVTRSGNRWQCDRCNQEFDE 516
E+P + ++R ISFI+ D Y AC + CNKK+T S
Sbjct: 124 LYFEQPAFFSIRGYISFIRPDQEMWYCAC------KTCNKKLTESMGD------------ 165
Query: 517 CDYRYLLQAQILDHTGITWVTAFQETGEEIMGYPAKELYMLKYEQQDDEKFAGIIKSRLF 576
Y + ++ D + +++ F E E+I+G A EL L+ ++ ++ + +K +
Sbjct: 166 ---GYSMIVRVSDASSEAYISIFNEEAEKIIGCSADELNDLRSQEGEENPYLMKLKKATW 222
Query: 577 NQFVFRLKIKEELYGDEQRVKVTVMKAGEVSYSSESGYMLDL 618
+ R+ + + +E+R K+T + V ++ + L +
Sbjct: 223 IPHLLRVSVSQNENNNEKRQKITAVAVVPVDLAANLNFSLKI 264
>Medtr8g062030.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:25901653-25904109 | 20130731
Length = 575
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 177/407 (43%), Gaps = 64/407 (15%)
Query: 188 PYQGRWAIKARVTAKGDLRRY---NNAKGDGKVFSFDLLDADGGEIRVTCFNTAVDRFYD 244
P + W I+ RV ++ + N A LLD G +I+ + F
Sbjct: 13 PGRLNWRIRVRVVRMWEVPTFLKPNQANS----LEMVLLDQMGVKIQAIVRKQLIYVFQK 68
Query: 245 VIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSFRSIS 304
+ G VY IS ++ P+ ++ + ++I+ +++ V+ C +IP SF SI
Sbjct: 69 RLREGEVYNISYFSVAPSTGSYRAATHPYKIVFQMTTKVQSC--TSATIPLYGLSFTSIV 126
Query: 305 DIEN--ADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSGRSVELTLWGEFC 362
D+ N + + ++DV+G+V +V +R +G T+ I + D SG+ +E L+GE+
Sbjct: 127 DVSNHTVEYDYLVDVMGLVTAVSEEREYVR-DGSVTKMIIFEVTDHSGK-IECALFGEYV 184
Query: 363 NREGQMLQEMMDAGF--FPTLAVKAGKVNDFSGKSI--GTISSTQLFINPDFSEAHSLRE 418
+ + GF P + V+ KV F K+ +T+L +NPD E + +
Sbjct: 185 ----ALWNGFVSKGFEGLPVVVVQFAKVKIFRDKATLQNVKGTTRLIVNPDVPEVIAFK- 239
Query: 419 WYDRVGKDSASLSISKDIIPGGPKNDV---------RKTVSQIKDEGLGRSEKPDWMTLR 469
DR+ + + ++ G K + +KT+SQ L SE+ + +
Sbjct: 240 --DRLIGLGIQVPPTLTVLGGPSKPSMEEEFLRMYPKKTISQ-----LFNSEEDGFFVVS 292
Query: 470 ATIS-FIKTDTFCYTACPLMIGDRQCNKKVTRSGNRWQCDRCNQEFDECDYRYLLQAQIL 528
A +S F++ + + Y AC +C++ VT + C C++ + RY ++ ++
Sbjct: 293 AIVSGFVEGEEWWYPAC-------KCHRSVTADSGAYYCKGCDKHVIQMVPRYKIKLRVD 345
Query: 529 DHTGITWVTAF-----------------QETGEEIMGYPAKELYMLK 558
D TG + F + G+++ YP E+ MLK
Sbjct: 346 DGTGDSVFVLFDSDVHYLLEKQCSVLVAKSKGDDVGFYPP-EIVMLK 391
>Medtr5g027390.1 | replication factor-A-like protein | LC |
chr5:11382204-11385197 | 20130731
Length = 477
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 157/359 (43%), Gaps = 44/359 (12%)
Query: 205 LRRYNNAKGDGKVFSFDLLDADGGEIRVT-CFNTAVDRFYD-----VIEVGRVYLISRGN 258
L + +NA D K+ ++RV C + + R + V++ G++Y+IS
Sbjct: 23 LNKLSNAAPDTKI-----------KVRVANCIHATIPRRFSPSLKKVLQEGKIYVISHYE 71
Query: 259 LKPAQKNFNHLKNEWEILLDLSSAVELCP-DEDGSIPKQQFSFRSISD-IENADSNSILD 316
+ ++ + ++N +L A+ +D +IP+ F F + +D I+ + D
Sbjct: 72 VSKNKEKYAVVENNPSMLSFYGDAIVTEEGSDDNTIPRYIFEFVNFNDLIKRCGKEVLAD 131
Query: 317 VIGVVISVKPSVPILRKNGMETQRRILNLKDCSGRSVELTLWGEFCNREGQMLQEMMDAG 376
VIG +I V P NG + L+L D SG +++TLW ++ Q L + M A
Sbjct: 132 VIGFIIDVDPIEEKTTVNG-KVDMLSLHLGDGSGNVLKVTLWDDYAPMFNQKLIDQMHAT 190
Query: 377 FFPTLAV-KAGKVNDFSGKS---IGTISSTQLFINPDFSEAHSL---REWYDRVGKDSAS 429
P +A+ + V + G + + ST ++IN D E L + + V K + +
Sbjct: 191 PKPNVAIFTSTLVKQYQGNCELYVSSSRSTTIYINIDTPEVADLILSSKGENSVLKTTET 250
Query: 430 LSISKDIIPGGPKNDVRKTVSQIKDEGLGRSEKPDWM-TLRATIS-FIKTDTFCYTACPL 487
LS++ N KT+S++ + + D + AT+ + + Y +CP
Sbjct: 251 LSLT---------NVDVKTISELLSMAVSGVYQGDVVYNCVATVDDILLKNGLYYVSCP- 300
Query: 488 MIGDRQCNKKVTRSGNRWQCDRCNQEFDECDYRYLLQAQILDHTGITWVTAFQETGEEI 546
C K V+ + + C+ C ++ D RY L+ Q+ D T T F E E++
Sbjct: 301 -----HCRKTVSSTETDFNCEHCTKKVDYPKIRYRLELQVNDSTESTIFVLFAEVAEQL 354
>Medtr4g070090.1 | replication factor-A-like protein | HC |
chr4:26377794-26380276 | 20130731
Length = 502
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 145/329 (44%), Gaps = 32/329 (9%)
Query: 234 CFNTAVDRFYD-----VIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCP- 287
C + + R + V++ G++Y+IS + ++ + ++N +L A+
Sbjct: 74 CIHATIPRRFSPSLKKVLQEGKIYVISHFEVSKNKEKYAVVENNPSMLSFYGDAIVTEEG 133
Query: 288 DEDGSIPKQQFSFRSISD-IENADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLK 346
+D +IP+ F F + +D I+ + DVIG +I V P NG + L+L
Sbjct: 134 SDDNTIPRYIFEFVNFNDLIKRCGKEVLADVIGFIIDVDPIEEKTTVNG-KVDMLSLHLG 192
Query: 347 DCSGRSVELTLWGEFCNREGQMLQEMMDAGFFPTLAV-KAGKVNDFSGKS---IGTISST 402
D SG +++TLW ++ Q L + M A P +A+ + V + G + + ST
Sbjct: 193 DGSGNVLKVTLWDDYAPMFNQKLIDQMHATPKPNVAIFTSTLVKQYQGNCELYVSSSRST 252
Query: 403 QLFINPDFSEAHSL---REWYDRVGKDSASLSISKDIIPGGPKNDVRKTVSQIKDEGLGR 459
++IN D E L + + V K + +LS++ N KT+S++ +
Sbjct: 253 TIYINIDTPEVADLILSSKGKNSVLKTTETLSLT---------NVDVKTISELLSMAVSG 303
Query: 460 SEKPDWM-TLRATIS-FIKTDTFCYTACPLMIGDRQCNKKVTRSGNRWQCDRCNQEFDEC 517
+ D + AT+ + + Y +CP C K V+ + + C+ C ++ D
Sbjct: 304 VYQGDVVYNCVATVDDILLKNGLYYVSCP------HCRKTVSSTETDFNCEHCTKKVDYP 357
Query: 518 DYRYLLQAQILDHTGITWVTAFQETGEEI 546
RY L+ Q+ D T T F E E++
Sbjct: 358 KIRYRLELQVNDSTESTIFVLFAEVAEQL 386
>Medtr5g078250.1 | replication factor-A carboxy-terminal domain
protein | LC | chr5:33436158-33438920 | 20130731
Length = 517
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 151/348 (43%), Gaps = 38/348 (10%)
Query: 222 LLDADGGEIRVTCFNTAVDRFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSS 281
L+D G +I + F + G+VY +S ++ P+ ++ + ++I+ +++
Sbjct: 46 LIDEMGTKIHASVRKQLFYVFQSKLSEGKVYEMSCFSVAPSVGSYRTTLHPYKIVFQMTT 105
Query: 282 AVELCPDEDGSIPKQQFSFRSISDI--ENADSNSILDVIGVVISVKPSVPILRKNGMETQ 339
V+ C E SIP S I+D+ +D + ++DV+G + + +R +G T+
Sbjct: 106 KVQAC--EGASIPSLGISLCKIADVCQHTSDHDYLVDVLGFMTGISVEREYVR-DGKVTK 162
Query: 340 RRILNLKDCSGRSVELTLWGEFCNREGQMLQEMMDAGFFPTLAVKAGKVNDFSGKSI--G 397
I + D SG+ E L+G++ + +++ + G P + V+ KV F K+
Sbjct: 163 MVIFEITDASGK-CECALFGQYVDTLNKLMGK--SGGGMPIILVQFAKVKIFRDKASLQN 219
Query: 398 TISSTQLFINPDFSEAHSLREWYD----------RVGKDSASLSISKDIIPGGPKNDVRK 447
+++T++ INP +A +R+ R+G S +S+ +D + PK + +
Sbjct: 220 VMNTTRILINPPIEQADQIRKSVTFGSMDVSSVPRIGARS-KVSLEEDFLRTFPKKTLEQ 278
Query: 448 TVSQIKDEGLGRSEKPDWMTLRATI-SFIKTDTFCYTACPLMIGDRQCNKKVTRSGNRWQ 506
S +D + ATI + + + Y AC +C++ V+ +
Sbjct: 279 LHSTFED---------GVFVVYATIGGLVDHEDWWYPAC-------KCHRSVSADSGAFY 322
Query: 507 CDRCNQEFDECDYRYLLQAQILDHTGITWVTAFQETGEEIMGYPAKEL 554
C C + + R+ ++ + D T + F + ++ P L
Sbjct: 323 CKGCAKHVFQMVPRFRVKVNVSDATNVGVFVVFDGDMQNLLNTPCSSL 370
>Medtr2g048560.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:21416239-21412307 | 20130731
Length = 549
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 163/376 (43%), Gaps = 29/376 (7%)
Query: 183 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFD--LLDADGGEIRVTCFNTAVD 240
I+ ++P + W I+ RV +R + K D +S + L+D G I + T +
Sbjct: 8 ISDISPSKENWNIRVRVVRLWFVR---DMKKDQLPYSLEMVLMDNKGDRINASVRRTLIY 64
Query: 241 RFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSF 300
++ + RV+ I ++ ++ ++ ++I + ++ C +D +P +
Sbjct: 65 KYEKELREDRVFSIGNFSVASNVGSYRTARHPYKINFQYGTKIKQC--DDKFVPADIYVI 122
Query: 301 RSISDI--ENADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSGRSVELTLW 358
+I D++ ++DV+G++ +V R NG +++ + L D G ++TL+
Sbjct: 123 GDSREIFQSEYDTDYLIDVMGMLKAVGVEKSYTR-NGSQSKMIPIEL-DYDGFRFKVTLF 180
Query: 359 GEFCNREGQMLQEMMDAGFFPTLAVKAGKVNDFSGKSI--GTISSTQLFINPDFSEAHSL 416
G + + L +AV K+ F G++ TI++T++ NP F+ A L
Sbjct: 181 GPYVDELNAFLASGETENV--VVAVLLTKIKIFQGQATIQNTINATKVLFNPTFTAALLL 238
Query: 417 REWYDRVGKDSASLSISKDIIPGGPKNDVRKTVSQIKD----EGLGRSEKPDWMTLRATI 472
++ DS S ISK I K V + + EGL + + T+
Sbjct: 239 KKRMVE-NDDSPSPGISK--ITEASKVSVEEDFLNLSPMTTVEGLKDCAEEKCFAVFGTV 295
Query: 473 SFIKTDT-FCYTACPLMIGDRQCNKKVTRSGNRWQCDRCNQEFDECDYRYLLQAQILDHT 531
+ I D+ + YT+C + CNKKV + C +CN+ RY+++ +++DHT
Sbjct: 296 NVIVDDSDWWYTSCVV------CNKKVYPDEKMYFCSKCNKHVLNVTPRYMIKMRVVDHT 349
Query: 532 GITWVTAFQETGEEIM 547
F E+
Sbjct: 350 DSATFVLFDRDAAELF 365
>Medtr5g026880.1 | replication factor-A protein 1, amine-terminal
domain protein | HC | chr5:11111702-11112243 | 20130731
Length = 135
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 1 MAVNLTANAIPAIVSGDLNLKPLLQVLDIKLISNSKQQ--ERYRILLSDAVSSQQAMLAT 58
MAVNLT AI + +P+LQV D+KL+ + + E YR++LSD + QQ ML
Sbjct: 1 MAVNLTQGAIITMCFTSEVWEPVLQVFDMKLVQSQQNNTTEPYRLVLSDGLYYQQGMLVV 60
Query: 59 QLNDQLRAGLVKRGSIVQLIEYICSPIQNRKIIVVLNMETIISDYEIIGNPKLFVETDFP 118
Q N + +G +++GSIV+L + C ++ I+ ++IG P L + P
Sbjct: 61 QKNHLVHSGRLQKGSIVKLSHFYCDDVK----------YVIMDKCDLIGKPVL-APKEAP 109
Query: 119 NQEAL 123
+Q A+
Sbjct: 110 SQSAV 114
>Medtr4g036240.1 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830642-11833873 | 20130731
Length = 560
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 166/416 (39%), Gaps = 27/416 (6%)
Query: 182 PIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFD--LLDADGGEIRVTCFNTAV 239
PI+ ++ + W IKARV + +N + FS + L+D++G I + T +
Sbjct: 7 PISQISSSKPAWNIKARVVRLWKVSDFNR---NTLPFSIEMVLMDSEGSRIHASIKKTLL 63
Query: 240 DRFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFS 299
+F I G+VY S N+ A ++ + L+ + P + F
Sbjct: 64 YKFQSEIREGKVY--SFENMGVAANGGSYKTTHYPYKLNFQFGTKCLPLCGALVSGSDFK 121
Query: 300 FRSISDIENA--DSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSGRSVELTL 357
F ISDI D + ++DVIG++ V R NG T+ ++ + + G ++ TL
Sbjct: 122 FVPISDIVGGSYDCDYLVDVIGMLTGVGTEREYER-NGSATKLNVIAM-EADGYKLQCTL 179
Query: 358 WGEFCNREGQMLQEMMDAGFFPTLAVKAGKVNDFSGKSIGTISSTQLFINPDFSEAHSLR 417
+G + + L A ++ + KV + ++ T+L NP E + +
Sbjct: 180 FGTYVDELNTFLATGETANVVVSIQLAKVKVFQDNIHIQNCLNCTRLKFNPVCVEGTAFK 239
Query: 418 EWY---DRVGKDSASLSISKDIIPGGPKNDVRKTVSQIKDEGLGRSEKPDWMTLRATIS- 473
D L++ I P D + +GL S++ + T+
Sbjct: 240 NRMIENDDTPSPLTQLAVEPSI---DPLQDFLFNTPRTTIQGLKDSQQEGMYVVLGTVKQ 296
Query: 474 FIKTDTFCYTACPLMIGDRQCNKKVTRSGNRWQCDRCNQEFDECDYRYLLQAQILDHTGI 533
+ + + YTAC CNK V + C++CN+ + RY ++ +++D +
Sbjct: 297 IVNPENWYYTAC-------MCNKSVYPAEGMHFCEKCNRHVVKVFPRYSIKVRVVDDSDC 349
Query: 534 TWVTAFQETGEEIMGYPAKELYMLKYEQQDDEKFAGIIKSRLFNQFVFRLKIKEEL 589
F + ++ L+ + D+ I + + ++F+++ K +
Sbjct: 350 ATFVLFDRDATMLFNKSCADI--LETHRADEGVLPTEIAALVNCTYLFKVEFKTAI 403
>Medtr1g105785.1 | replication factor-A carboxy-terminal domain
protein | HC | chr1:47732917-47735741 | 20130731
Length = 566
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 89/416 (21%), Positives = 173/416 (41%), Gaps = 26/416 (6%)
Query: 180 VIPIAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDADGGEIRVTCFNTAV 239
+ P+AA+ + ++ RV + +NN D + LLD G+I+ + V
Sbjct: 5 ITPVAAIVAGKINIKLRVRVVHVWTVSEFNNPNEDNSIHML-LLDDKLGKIQASAKKHLV 63
Query: 240 DRFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFS 299
R +E G Y I N+ + + + + L+L + + +IP F
Sbjct: 64 PRIRSNVEEGSTYDIE--NVLVTKNDPKYQVTQHRFKLNLIDNTKFFKIDAATIPLNHFD 121
Query: 300 FRSISDIENAD-SNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSGRSVELTLW 358
F ++I A+ ++DVIG V+ + + NG ++ L L+D R V TLW
Sbjct: 122 FMPFNEILEAEREEKVVDVIGQVVE-RDELKERDVNGRRSKIMDLTLQDSESRRVHCTLW 180
Query: 359 GEFCNREGQMLQEMMDAGFFPTLAVKAGKVNDFSGKSIGTISS----TQLFINPDFSEAH 414
+ R L D + ++ K+ + G I +S+ T+L + D EA
Sbjct: 181 ANYAERMNSFLA-AHDPSSPVIVLIQQCKLKKYQG--IMGVSNAFFGTKLLLEGDLPEAI 237
Query: 415 SLREWYDRVGKDSASLSISKDIIPG--GPKNDVRKTVSQIKDEGLGRSEKPDWMTLRATI 472
+ D G S SIS++ +D+ +T ++ + +E+ + L ATI
Sbjct: 238 EFKSKIDG-GDVQVSQSISQNTTSTVVSLVDDMLQTKRMTIEDLIEATEQCQGIVL-ATI 295
Query: 473 SFIKTD-TFCYTACPLMIGDRQCNKKVTRSGNRWQCDRCNQEFDECDYRYLLQAQILDHT 531
I+++ ++ Y AC +C +V R C +CN + R+ L Q++D+T
Sbjct: 296 CGIESEYSWYYQACT------KCAGRVRTVAGRLYCGKCNTGRNAVP-RFKLHVQVMDNT 348
Query: 532 GITWVTAFQETGEEIMGYPAKELYMLKYEQQDDEKFAGIIKSRLFNQFVFRLKIKE 587
G T F + ++ M+ + + + + S + + +F++++ +
Sbjct: 349 GSTSFILFDRNVSSYVNRTVQD--MIDAQPNNSSDYPSDLDSFVGKRMLFKVEVSD 402
>Medtr8g479260.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:33777150-33779789 | 20130731
Length = 555
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/368 (20%), Positives = 152/368 (41%), Gaps = 45/368 (12%)
Query: 193 WAIKARVTAKGDLRRYNNAKGDGKVFSFDL--LDADGGEIRVTCFNTAVDRFYDVIEVGR 250
W +K ++ + +N G+ FS ++ LD G I + T + +F + + G+
Sbjct: 20 WNLKGKIIRLWQVSDFN---GNRMPFSIEMVILDEAGDRIHASLKKTLIYKFRNDLFEGK 76
Query: 251 VYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSFRSISDIENA- 309
+ + + K+ +++ LSS V+ P +I K + IS++
Sbjct: 77 CFSFENMGVANNGGGYRTTKHTYKLNFQLSSKVKYLPAL--TITKSPYQLVPISEVIGGT 134
Query: 310 -DSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSGRSVELTLWGEFCNREGQM 368
D++ ++D+IGV+ V S L +NG T+ ++ L + G ++ TL+G + +
Sbjct: 135 YDTDYLVDIIGVLTGVG-SERELERNGNMTKLNVIEL-EAGGFKIQCTLFGSYVDD---- 188
Query: 369 LQEMMDAGFFPT--LAVKAGKVNDFSGK--SIGTISSTQLFINPDFSEAHSLREWYDRVG 424
L + +G P + ++ K F K I T++ P A S+R
Sbjct: 189 LNSFIASGDIPNAIVIIQLAKAKSFQDKIHVQNCIGCTKVIFKPTCDAAVSMRNRLSETV 248
Query: 425 KDSASLSISK-----------DIIPGGPKNDVRKTVSQIKDEGLGRSEKPDWMTLRATIS 473
+ L +++ + + G P+N T+ +KD + ++ L
Sbjct: 249 DTPSPLGLTQLQPEAKLDPREEFLYGTPRN----TMQGLKDA----TTNEVYVVLGTIKR 300
Query: 474 FIKTDTFCYTACPLMIGDRQCNKKVTRSGNRWQCDRCNQEFDECDYRYLLQAQILDHTGI 533
+ + F YTAC C+K V + C++C++ + RY L+ + +DHT
Sbjct: 301 IVNRENFWYTAC-------ICSKAVIPDSQMFYCEKCDRHVKKVFSRYCLRVRAIDHTDC 353
Query: 534 TWVTAFQE 541
+ F +
Sbjct: 354 ATLVIFDK 361
>Medtr1g075850.1 | replication factor-A carboxy-terminal domain
protein | LC | chr1:33615520-33612872 | 20130731
Length = 528
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 137/298 (45%), Gaps = 42/298 (14%)
Query: 249 GRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSFRSISDI-- 306
G+VY +S ++ P+ ++ + ++I+ +++ V++C ED SIP S I D+
Sbjct: 67 GKVYQMSCFSVAPSVGSYRTTSHPYKIVFQMTTKVQVC--EDASIPSFGISLCKIVDVCQ 124
Query: 307 ENADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSGRSVELTLWGEFCNREG 366
+D + ++DV+G + + +R +G T+ + + D SG+ E L+G++ +
Sbjct: 125 HTSDHDYLVDVLGFMTDISAEREYVR-DGKVTKMVVFEITDASGK-CECALFGQYVDTLN 182
Query: 367 QMLQEMMDAGFFPTLAVKAGKVNDFSGKSI--GTISSTQLFINPDFSEAHSLREWYDRVG 424
+++ + AG P + V+ KV F K+ I++T + IN + +R+
Sbjct: 183 KLMGK--SAGGMPIILVQFAKVKIFRDKASLQNVINTTWILINLPIEQDDQVRKSVTFGS 240
Query: 425 KDSASL---------SISKDIIPGGPKNDVRKTVSQIK---DEGLGRSEKPDWMTLRATI 472
D +S+ S+ +D + PK KT+ Q+ D+G+ + +TI
Sbjct: 241 TDVSSIPRIGSRSKVSLEEDFLRTYPK----KTLEQLHSTFDDGV--------FVVYSTI 288
Query: 473 S-FIKTDTFCYTACPLMIGDRQCNKKVTRSGNRWQCDRCNQEFDECDYRYLLQAQILD 529
S + + + Y AC +C++ V+ + C C + + R+ ++ + D
Sbjct: 289 SGLVDHEDWWYPAC-------KCHRSVSADSGAFYCKGCAKHVFQMVPRFRVKVNVSD 339
>Medtr6g039240.1 | animal RPA1 domain protein | LC |
chr6:14180761-14182238 | 20130731
Length = 289
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 134/300 (44%), Gaps = 47/300 (15%)
Query: 183 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDL--LDADGGEIRVTCFNTAVD 240
I+ ++P + W + RV + Y N K FS +L +D G I + T +
Sbjct: 8 ISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLP---FSMELVLMDRKGDRIGASIRRTLIY 64
Query: 241 RFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSF 300
+F + ++ G V+ IS N+ ++ +NE+++ +++ V+L + +P +SF
Sbjct: 65 KFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKL--SKTVLVPTNVYSF 122
Query: 301 RSISDI--ENADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSGRSVELTLW 358
D+ E+ D+N ++DVIGV+I V G+E + +D + R + TL+
Sbjct: 123 TPAPDVFNESYDNNYLVDVIGVMIGV----------GVEREYE----RDGTYR-FKCTLF 167
Query: 359 GEFCNREGQMLQ--EMMDAGFFPTLAVKAGKVNDFSGKSI--GTISSTQLFINPDFSEAH 414
GE+ L E +A +A+ KV F GK SST++ NP+ E
Sbjct: 168 GEYVEELNSFLSSGESQNA----VVAIMLTKVKLFQGKPALQNAFSSTRITFNPEIGETK 223
Query: 415 SLREWYDRVGKDSAS-----------LSISKDIIPGGPKNDVRKTVSQIKDEGLGRSEKP 463
LR+ + +S + +S+ ++ + P R T+ ++K+ G+ P
Sbjct: 224 ELRKSFLSANTNSPASGLIQLPNSSCISVHEEFLLLTP----RTTIEELKNVYFGKVCTP 279
>Medtr2g008650.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:1569207-1566568 | 20130731
Length = 555
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 151/368 (41%), Gaps = 45/368 (12%)
Query: 193 WAIKARVTAKGDLRRYNNAKGDGKVFSFDL--LDADGGEIRVTCFNTAVDRFYDVIEVGR 250
W +K ++ + +N G+ FS ++ LD G I + T + +F + + G+
Sbjct: 20 WNLKGKIIRLWQVSDFN---GNRMPFSIEMVILDEAGDRIHASLKKTLIYKFRNDLFEGK 76
Query: 251 VYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSFRSISDIENA- 309
+ + + K+ +++ SS V+ P +I K + IS++
Sbjct: 77 CFSFENMGVANNGGGYRTTKHTYKLNFQFSSKVKYLPAL--TITKSPYQLVPISEVIGGT 134
Query: 310 -DSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSGRSVELTLWGEFCNREGQM 368
D++ ++D+IGV+ V S L +NG T+ ++ L + G ++ TL+G + +
Sbjct: 135 YDTDYLVDIIGVLTGVG-SERELERNGNMTKLNVIEL-EAGGFKIQCTLFGSYVDD---- 188
Query: 369 LQEMMDAGFFPT--LAVKAGKVNDFSGK--SIGTISSTQLFINPDFSEAHSLREWYDRVG 424
L + +G P + ++ K F K I T++ P A S+R
Sbjct: 189 LNSFIASGDIPNAIVIIQLAKAKSFQDKIHVQNCIGCTKVIFKPTCDAAVSMRNRLSETV 248
Query: 425 KDSASLSISK-----------DIIPGGPKNDVRKTVSQIKDEGLGRSEKPDWMTLRATIS 473
+ L +++ + + G P+N T+ +KD + ++ L
Sbjct: 249 DTPSPLGLTQLQPEAKLDPREEFLYGTPRN----TMQGLKDA----TTNEVYVVLGTIKR 300
Query: 474 FIKTDTFCYTACPLMIGDRQCNKKVTRSGNRWQCDRCNQEFDECDYRYLLQAQILDHTGI 533
+ + F YTAC C+K V + C++C++ + RY L+ + +DHT
Sbjct: 301 IVNRENFWYTAC-------ICSKAVIPDSQMFYCEKCDRHVKKVFSRYCLRVRAIDHTDC 353
Query: 534 TWVTAFQE 541
+ F +
Sbjct: 354 ATLVIFDK 361
>Medtr6g052340.1 | DNA primase | LC | chr6:18273765-18278897 |
20130731
Length = 665
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 99/203 (48%), Gaps = 10/203 (4%)
Query: 222 LLDADGGEIRVTCFNTAVDRFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSS 281
L+D +G +I T + F + G+VY +S + + + ++++ + +
Sbjct: 42 LIDQNGVKIHATIPKQLMYLFQHKLIEGKVYKLSNFTVLLNSGAYRTTHHTYKLIFQMKT 101
Query: 282 AVELCPDEDGS-IPKQQFSFRSISDI--ENADSNSILDVIGVVISVKPSVPILRKNGMET 338
VE D + S IP + IS I D ++DVIG++ + +R +G T
Sbjct: 102 KVEESHDYEISLIPNHGLTLTDISQITSRTQDYEYLVDVIGLMTGISAEREFVR-DGKLT 160
Query: 339 QRRILNLKDCSGRSVELTLWGEFCNREGQMLQEMMDAGFFPTLAVKAGKVNDFSGK-SIG 397
+ ++ L D SG+ E TL+G + + +++ + ++ P + ++ KV F GK SI
Sbjct: 161 KILVIELTDHSGK-CECTLFGNYVDELHKLMSKAVEGS--PVIVIQFAKVKIFRGKASIQ 217
Query: 398 TI--SSTQLFINPDFSEAHSLRE 418
+ S+T++++NP F EA +E
Sbjct: 218 NVVGSTTRIYLNPSFPEALKFKE 240
>Medtr8g463820.1 | animal RPA1 domain protein | LC |
chr8:22514633-22516142 | 20130731
Length = 283
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 117/255 (45%), Gaps = 32/255 (12%)
Query: 183 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDL--LDADGGEIRVTCFNTAVD 240
I+ ++P + W + RV + Y N K FS +L +D G I + T +
Sbjct: 8 ISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLP---FSMELVLMDRKGDRIGASIRRTLIY 64
Query: 241 RFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSF 300
+F + ++ G V+ IS ++ ++ +NE+++ +++ V+L + +P +SF
Sbjct: 65 KFKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLS--KTVLVPTNVYSF 122
Query: 301 RSISDI--ENADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSGRSVELTLW 358
D+ E+ D+N ++DVIGV+I V G+E + +D + R + TL+
Sbjct: 123 TPAPDVFNESYDNNYLVDVIGVMIGV----------GVEREYE----RDGTYR-FKCTLF 167
Query: 359 GEFCNREGQMLQ--EMMDAGFFPTLAVKAGKVNDFSGKSI--GTISSTQLFINPDFSEAH 414
GE+ L E +A +A+ KV F GK SST++ NP+ E
Sbjct: 168 GEYVEELNSFLSSGESQNA----VVAIMLTKVKLFQGKPALQNAFSSTRITFNPEIGETK 223
Query: 415 SLREWYDRVGKDSAS 429
LR+ + +S +
Sbjct: 224 ELRKSFLSANTNSPA 238
>Medtr1g094230.1 | animal RPA1 domain protein | LC |
chr1:42436471-42437983 | 20130731
Length = 303
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 132/298 (44%), Gaps = 43/298 (14%)
Query: 183 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDL--LDADGGEIRVTCFNTAVD 240
I+ ++P + W + RV + Y N K FS +L +D G I + T +
Sbjct: 8 ISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLP---FSMELVLMDRKGDRIGASIRRTLIY 64
Query: 241 RFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSF 300
+F + ++ G V+ IS N+ ++ +NE+++ +++ V+L + +P +SF
Sbjct: 65 KFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKL--SKTVLVPTNVYSF 122
Query: 301 RSISDI--ENADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSGRSVELTLW 358
D+ E+ D+N ++DVIGV+I V G+E + +D + R + TL+
Sbjct: 123 TPAPDVFNESYDNNYLVDVIGVMIGV----------GVEREYE----RDGTYR-FKCTLF 167
Query: 359 GEFCNREGQMLQ--EMMDAGFFPTLAVKAGKVNDFSGKSI--GTISSTQLFINPDFSEAH 414
GE+ L E +A +A+ KV F GK S T++ NP+ E
Sbjct: 168 GEYVEELNSFLSSGESQNA----VVAIMLTKVKLFQGKPALRNAFSYTRITFNPEMGETK 223
Query: 415 SLREWYDRVGKDSASLSISKDIIPGGPKNDV---------RKTVSQIKDEGLGRSEKP 463
+R+ + +S + + + +P + V R T+ ++K+ G+ P
Sbjct: 224 EIRKSFLSANTNSPASGLIQ--LPNSSRIPVNEEFLLLTPRTTIEELKNVYFGKVCTP 279
>Medtr6g445520.1 | replication factor-A carboxy-terminal domain
protein | HC | chr6:15886770-15884303 | 20130731
Length = 428
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 398 TISSTQLFINPDFSEAHSLREWYDRVGKD---SASLSISKDIIPGGPKNDVRKTVSQIKD 454
TI ST+L NPD AH L++ VGKD S ++ +D ++D K +
Sbjct: 86 TIYSTKLIFNPDLIVAHDLKKRM--VGKDGVPSPGITFLQDPSRITEEDDFLKITPRKTV 143
Query: 455 EGLGRSEKPDWMTLRATISF-IKTDTFCYTACPLMIGDRQCNKKVTRSGNRWQCDRCNQE 513
E L ++AT+ F I TD + YTAC CNKKV + C +CN+
Sbjct: 144 EDLKECAMESCFVVKATVKFVIDTDEWWYTAC-------VCNKKVVPDEKMFFCAKCNKH 196
Query: 514 FDECDYRYLLQAQILDHT 531
RY+++ +++D T
Sbjct: 197 VIHVCPRYMIKVRVIDET 214
>Medtr8g088810.1 | DUF223 domain protein | LC |
chr8:36895897-36893498 | 20130731
Length = 306
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 116/240 (48%), Gaps = 11/240 (4%)
Query: 183 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDLLDADGGEIRVTCFNTAVDRF 242
I+ ++P + W + RV + Y N K + F L+D G +I + T + +F
Sbjct: 8 ISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLPFSM-EFVLIDRKGDQIGASIRRTLIYKF 66
Query: 243 YDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSFRS 302
+ ++ G V+ IS ++ ++ NE+++ +++ V+L + +P +SF
Sbjct: 67 KEQLQEGMVFTISSFDVASNSGSYRPSHNEYKLNFTINTKVKLS--KTILVPINVYSFTP 124
Query: 303 ISDI--ENADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSGRSVELTLWGE 360
D+ E+ D+N ++DVIGV+I V R+ G +T+ ++ L D +G + TL+GE
Sbjct: 125 APDVFNESYDNNYLVDVIGVIIGVGVEREYERE-GTKTKMNVIEL-DSNGYRFKCTLFGE 182
Query: 361 FCNREGQMLQEMMDAGFFPTLAVKAGKVNDFSGKSI--GTISSTQLFINPDFSEAHSLRE 418
+ +L D +A+ KV F GK +SST++ NP+ E LR+
Sbjct: 183 YVEELNSLLSS--DESQNVVVAIMLTKVKLFQGKPALQNALSSTRITFNPEIGETKELRK 240
>Medtr1g052715.1 | DUF223 domain protein | LC |
chr1:21677037-21675057 | 20130731
Length = 334
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 8/201 (3%)
Query: 222 LLDADGGEIRVTCFNTAVDRFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSS 281
LLD G I + + +F D E G +Y+I + + F +++++ L +
Sbjct: 5 LLDNQGVTIHASVRKHLLPQFKDQFEKGSIYVIEKLMVAQNDPTFKTTPHKYKLNLMGGT 64
Query: 282 AVELCPDEDGSIPKQQFSFRSISDIENAD-SNSILDVIGVVISVKPSVPILRKNGMETQR 340
+ D + IPK+ F F + DI N + ++DVIG V+ K + + KNG +
Sbjct: 65 TIFKLKDSN-EIPKRHFQFMTFVDIMNCHKEDRLIDVIGHVVE-KDELKVTEKNGKTNKV 122
Query: 341 RILNLKDCSGRSVELTLWGEFCNREGQMLQEMMDAGFFPTLAVKAGKVNDFSGKSIGTIS 400
L+D G + TLW ++ + + L E D + ++ K+ + G ++G +
Sbjct: 123 MDATLEDLDGNRIHCTLWDDYAEQLKRFL-ESHDPNLPAVILIQMCKLKKYFG-AMGISN 180
Query: 401 S---TQLFINPDFSEAHSLRE 418
+ T+L + + E S E
Sbjct: 181 AFYGTKLLFDVELPEVASYLE 201
>Medtr8g036090.1 | animal RPA1 domain protein | HC |
chr8:13279086-13278300 | 20130731
Length = 172
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 11/172 (6%)
Query: 183 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDL--LDADGGEIRVTCFNTAVD 240
I+ ++P + W + RV + Y N K FS +L +D G I + T +
Sbjct: 8 ISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLP---FSMELVLMDRKGDRIGASIRRTLIY 64
Query: 241 RFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSF 300
+F + ++ G V+ IS N+ ++ +NE+++ +++ V+L + +P +SF
Sbjct: 65 KFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLS--KTVLVPTNVYSF 122
Query: 301 RSISDI--ENADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSG 350
D+ E+ D+N ++DVIGV+I V R +G++T+ ++ L D +G
Sbjct: 123 TPAPDVFNESYDNNYLVDVIGVMIGVGVEREYER-DGVKTKMNVIEL-DSNG 172
>Medtr4g471610.1 | animal RPA1 domain protein | HC |
chr4:27071837-27072623 | 20130731
Length = 172
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 11/172 (6%)
Query: 183 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDL--LDADGGEIRVTCFNTAVD 240
I+ ++P + W + RV + Y N K FS +L +D G I + T +
Sbjct: 8 ISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLP---FSMELVLMDRKGDRIGASIRRTLIY 64
Query: 241 RFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSF 300
+F + ++ G V+ IS N+ ++ +NE+++ +++ V+L + +P +SF
Sbjct: 65 KFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLS--KTVLVPTNVYSF 122
Query: 301 RSISDI--ENADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSG 350
D+ E+ D+N ++DVIGV+I V R +G++T+ ++ L D +G
Sbjct: 123 TPAPDVFNESYDNNYLVDVIGVMIGVGVEREYER-DGVKTKMNVIEL-DSNG 172
>Medtr3g078440.1 | animal RPA1 domain protein | HC |
chr3:35350146-35349360 | 20130731
Length = 172
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 11/172 (6%)
Query: 183 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDL--LDADGGEIRVTCFNTAVD 240
I+ ++P + W + RV + Y N K FS +L +D G I + T +
Sbjct: 8 ISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLP---FSMELVLMDRKGDRIGASIRRTLIY 64
Query: 241 RFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSF 300
+F + ++ G V+ IS N+ ++ +NE+++ +++ V+L + +P +SF
Sbjct: 65 KFKEQLQEGMVFTISSFNVASNSGSYRPSRNEYKLNFTINTKVKLS--KTVLVPTNVYSF 122
Query: 301 RSISDI--ENADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSG 350
D+ E+ D+N ++DVIGV+I V R +G++T+ ++ L D +G
Sbjct: 123 TPAPDVFNESYDNNYLVDVIGVMIGVGVEREYER-DGVKTKMNVIEL-DSNG 172
>Medtr3g056270.1 | replication factor-A carboxy-terminal domain
protein | HC | chr3:22409504-22413525 | 20130731
Length = 719
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 124/319 (38%), Gaps = 20/319 (6%)
Query: 217 VFSFDLLDADGGEIRVTCFNTAVDRFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEIL 276
V S L G +I + T +F I G+VY S N+ A ++
Sbjct: 200 VVSIQLAKVKGSKIHASIKKTLWYKFQSEIREGKVY--SFENMGVAANGGSYKTTHHPYK 257
Query: 277 LDLSSAVELCPDEDGSIPKQQFSFRSISDIENA--DSNSILDVIGVVISVKPSVPILRKN 334
L++ + P + F F I DI D + ++DVIG++ V R N
Sbjct: 258 LNVQFGTKCLPLCGALVSGSDFKFVPIFDIVGGSYDCDYLVDVIGMLTGVGTEREYER-N 316
Query: 335 GMETQRRILNLKDCSGRSVELTLWGEFCNREGQMLQEMMDAGFFPTLAVKAGKVNDFSGK 394
G T+ ++ + + G ++ TL+G + + L A ++ + KV +
Sbjct: 317 GSATKLNVIAM-EADGYKLQCTLFGTYVDELNTFLATGETANVVVSIQLAKVKVFQDNIH 375
Query: 395 SIGTISSTQLFINPDFSEAHSLREWY---DRVGKDSASLSISKDIIPGGPKNDVRKTVSQ 451
++ T+L NP +E + + D L++ I P D +
Sbjct: 376 IQNCLNCTRLKFNPVCAEGTAFKNRMIENDDTPSPLTQLAVEPSI---DPLQDFLFNTPR 432
Query: 452 IKDEGLGRSEKPDWMTLRATIS-FIKTDTFCYTACPLMIGDRQCNKKVTRSGNRWQCDRC 510
+GL S++ + T+ + + + YTAC CNK V + C++C
Sbjct: 433 TTIQGLKDSQQEGMYVVLGTVKQIVNPENWYYTAC-------MCNKSVYPAEGMHFCEKC 485
Query: 511 NQEFDECDYRYLLQAQILD 529
N+ + RY ++ +++D
Sbjct: 486 NRHVVKVFPRYSIKVRVVD 504
>Medtr3g116750.1 | animal RPA1 domain protein | HC |
chr3:54610965-54611750 | 20130731
Length = 172
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 11/172 (6%)
Query: 183 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDL--LDADGGEIRVTCFNTAVD 240
I+ ++P + W + RV + Y N K FS +L +D G I + T +
Sbjct: 8 ISNVSPRKQSWTLVVRVARAWFGQDYKNKKLP---FSMELVLIDRKGDRIGASIRRTLIY 64
Query: 241 RFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSF 300
+F + ++ G V+ IS N+ ++ +NE+++ +++ V+L + +P +SF
Sbjct: 65 KFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLS--KTVLVPTNVYSF 122
Query: 301 RSISDI--ENADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSG 350
D+ E+ D+N ++DVIGV+I V R +G++T+ ++ L D +G
Sbjct: 123 TPAPDVFNESYDNNYLVDVIGVMIGVGVEKEYER-DGVKTKMNVIEL-DSNG 172
>Medtr3g095950.1 | animal RPA1 domain protein | HC |
chr3:43845609-43846394 | 20130731
Length = 172
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 87/172 (50%), Gaps = 11/172 (6%)
Query: 183 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDL--LDADGGEIRVTCFNTAVD 240
I+ ++P + W + RV + Y N K FS +L +D G I + T +
Sbjct: 8 ISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLP---FSMELVLIDRKGDRIGASIRRTLIY 64
Query: 241 RFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSF 300
+F + ++ G V+ IS N+ ++ +NE+++ +++ V+L + +P +SF
Sbjct: 65 KFKNQLQEGMVFTISSFNVASNIGSYRPSRNEYKLNFTINTKVKLS--KTVLVPTNVYSF 122
Query: 301 RSISDI--ENADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSG 350
D+ E+ D+N ++DVIGV+I V R +G++T+ ++ L D +G
Sbjct: 123 TPAPDVFNESYDNNYLVDVIGVMIGVGVEKEYER-DGVKTKMNVIEL-DSNG 172
>Medtr8g096680.1 | animal RPA1 domain protein | HC |
chr8:40558216-40559002 | 20130731
Length = 172
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 87/172 (50%), Gaps = 11/172 (6%)
Query: 183 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDL--LDADGGEIRVTCFNTAVD 240
I+ ++P + W + RV + Y N K FS +L +D G I + T +
Sbjct: 8 ISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLP---FSMELVLMDRKGDRIGASIRRTLIY 64
Query: 241 RFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSF 300
+F + ++ G V+ IS ++ ++ +NE+++ +++ V+L + +P +SF
Sbjct: 65 KFKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLS--KTVLVPTNVYSF 122
Query: 301 RSISDI--ENADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSG 350
D+ E+ D+N ++DVIGV+I V R +G++T+ ++ L D +G
Sbjct: 123 TPAPDVFNESYDNNYLVDVIGVMIGVGVEREYER-DGVKTKMNVIEL-DSNG 172
>Medtr1g036740.1 | animal RPA1 domain protein | HC |
chr1:13497342-13498128 | 20130731
Length = 172
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 87/172 (50%), Gaps = 11/172 (6%)
Query: 183 IAALNPYQGRWAIKARVTAKGDLRRYNNAKGDGKVFSFDL--LDADGGEIRVTCFNTAVD 240
I+ ++P + W + RV + Y N K FS +L +D G I + T +
Sbjct: 8 ISNVSPRKQSWTLVVRVVRAWFGQDYKNKKLP---FSMELVLMDRKGDRIGASIRRTLIY 64
Query: 241 RFYDVIEVGRVYLISRGNLKPAQKNFNHLKNEWEILLDLSSAVELCPDEDGSIPKQQFSF 300
+F + ++ G V+ IS ++ ++ +NE+++ +++ V+L + +P +SF
Sbjct: 65 KFKEQLQEGMVFTISSFDVASNSGSYRPSRNEYKLNFTINTKVKLS--KTVLVPTNVYSF 122
Query: 301 RSISDI--ENADSNSILDVIGVVISVKPSVPILRKNGMETQRRILNLKDCSG 350
D+ E+ D+N ++DVIGV+I V R +G++T+ ++ L D +G
Sbjct: 123 TPAPDVFNESYDNNYLVDVIGVMIGVGVEREYER-DGVKTKMNVIEL-DSNG 172