Miyakogusa Predicted Gene

Lj4g3v2179260.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2179260.1 Non Characterized Hit- tr|K3ZXA5|K3ZXA5_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si031237,64.06,2e-19,seg,NULL; GCK,GCK;
coiled-coil,NULL,CUFF.50426.1
         (117 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g082300.2 | GCK domain protein | HC | chr4:32023831-320258...   113   4e-26
Medtr4g082300.1 | GCK domain protein | HC | chr4:32023831-320274...   113   5e-26

>Medtr4g082300.2 | GCK domain protein | HC | chr4:32023831-32025884
           | 20130731
          Length = 254

 Score =  113 bits (282), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 48/58 (82%), Positives = 55/58 (94%)

Query: 36  CGFCLFMKGGGCKDSFIDWENCVQEAEKNNEDLVEKCAQVTARLKQCMDAHADYYEPI 93
           CGFCLFMKGGGCKD+FI+WE+CV+EAE  NEDLVEKCA+VTA+LKQCMD H+DYYEPI
Sbjct: 47  CGFCLFMKGGGCKDTFINWEDCVKEAEDKNEDLVEKCAEVTAKLKQCMDEHSDYYEPI 104



 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 35/58 (60%), Positives = 48/58 (82%)

Query: 36  CGFCLFMKGGGCKDSFIDWENCVQEAEKNNEDLVEKCAQVTARLKQCMDAHADYYEPI 93
           CGFCLF+KG  C+D+ ++WENCV+EA++  EDL EKC+ VT RL QCMD+++DY +PI
Sbjct: 179 CGFCLFIKGDSCRDTLVEWENCVKEAKEKKEDLAEKCSGVTTRLLQCMDSNSDYCKPI 236


>Medtr4g082300.1 | GCK domain protein | HC | chr4:32023831-32027413
           | 20130731
          Length = 357

 Score =  113 bits (282), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 48/58 (82%), Positives = 55/58 (94%)

Query: 36  CGFCLFMKGGGCKDSFIDWENCVQEAEKNNEDLVEKCAQVTARLKQCMDAHADYYEPI 93
           CGFCLFMKGGGCKD+FI+WE+CV+EAE  NEDLVEKCA+VTA+LKQCMD H+DYYEPI
Sbjct: 47  CGFCLFMKGGGCKDTFINWEDCVKEAEDKNEDLVEKCAEVTAKLKQCMDEHSDYYEPI 104



 Score =  102 bits (254), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 42/56 (75%), Positives = 51/56 (91%)

Query: 38  FCLFMKGGGCKDSFIDWENCVQEAEKNNEDLVEKCAQVTARLKQCMDAHADYYEPI 93
           FC+FMKGGGC+D+F+DWENC+ EAEKN ED+VEKC+QVT  LKQCMD+H+DYY PI
Sbjct: 275 FCVFMKGGGCRDTFVDWENCMDEAEKNKEDVVEKCSQVTDLLKQCMDSHSDYYGPI 330



 Score = 87.0 bits (214), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 35/58 (60%), Positives = 48/58 (82%)

Query: 36  CGFCLFMKGGGCKDSFIDWENCVQEAEKNNEDLVEKCAQVTARLKQCMDAHADYYEPI 93
           CGFCLF+KG  C+D+ ++WENCV+EA++  EDL EKC+ VT RL QCMD+++DY +PI
Sbjct: 179 CGFCLFIKGDSCRDTLVEWENCVKEAKEKKEDLAEKCSGVTTRLLQCMDSNSDYCKPI 236